| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925359
Identifier: 238925359
GI number: 238925359
Start: 2891637
End: 2894231
Strand: Reverse
Name: 238925359
Synonym: EUBREC_3014
Alternate gene names: NA
Gene position: 2894231-2891637 (Counterclockwise)
Preceding gene: 238925360
Following gene: 238925358
Centisome position: 83.9
GC content: 43.39
Gene sequence:
>2595_bases ATGAAATTACCAGAATTGAAAGAAAAGTTAAAAAGTAAATATATTGTCCGTGTTGTAGCCGGAGTCCTCACAATAGCACT TGTAGGTACAGGAATCGGAGCAACAGCGGTTTTTGCAGAGAAGAACAGCACCGCAGTCACAGCCGAGGCAGACAGCACAA CAGGAAGCAGCAAGGATGCTGATGACATAGCAGATAAGCTCATGGACAGCGTATCATTGAAGGATAACGATGCAGACAAG GACGAGAGCGTATATCTCATCTCAGATGCAAACGGCAACGTAAACAAAACAATCGTAGTAGATCACCTTAAAAATAAAGA CAAAAAGGATACCTTGGAGGATGCTTCAAACCTTTCAGATATCGAGAACGTAAAGGGCAAGGAAAAATTCACACAAAGCG GTGACAAGCTCACCTGGCAGGCCGGTGGCAAGGACATTTACTATCAGGGCACAGCAACAGAGGAGCCACCTGTAACACAG AAGGTTACATATTACCTCGATGGAAAAGAAATCTCACCTGAGGATCTTGCAGGAAAATCAGGAAAGGTCAAAATCCGTTT TGACTACACAAATACCACATCATATACAGAGACAGTAAACGGCGAGAAGCAGACAGTTTCCGTACCATTTGCAGCAGTAA CAGGACTTGTACTCGGTGATGGCTTCGAGAATATCGAAGTGACAAACGGCAAGGCTGAGGTAAGTGATTCATCAAGCGTA GTGCTCGGCTATGCACTTCCGGGCTTAAAGGACAGCCTCGGAATCAAGGACAAAGACCTCGATGGCGATGTAAATATCCC TGAATACATGGAAATGACAGCAGATGTAGAGAATTTCTCAATGCCTGCAGCCATGACCTTCGTGGTAAACGCATCTGATT ATGTAAGCACAGACGGAATTGACACATCAGACATCGATGACATGATAAATGACTTAAAGGATGCCTCAACACAGCTTCAG GATGGTTCAAAGACACTGGCAGAGGGTACGGACACACTTTCTGACGGACTTTCAACACTGCAGAGCAAGCTCGGCACATT CGCATCAGGAGTTGGCACACTGAAGAGTGGACTTAAGACATATACTGATGGTGTTAGTACATTAAGTGGTGGATTGAATA AACTGAATTCAAATGTGCCTACTTTATCTAATGGCATAACAACATTAAACTCTAGTGCAAAATCACTGAATGATGGAGTG GCTTTGCTTAATGCAACTGTTTCAGCAAAATTTACTGATTCAGAAAAGAAGACTCTTTTAGATCAGGTACACAGCACATT GGAGTCTCAAAAATCTGAAATAGAAAAACAGGCACAGACAACAGTTGCGTCACAGAAAACAGCCATTCAAAAGCAGGCAC AGAGTGCTGTTGACTTACAAAAAACAGATATACAGAAACAGGCACAGAGTACAGTAGCTGATCAGAAAGAAGATATTGAG AAAAAGGCTCAGGCCGCAGTAGACGATCAGAAGGAGCAGATTAAGTCAGTAGCAGCTGAGACAGTAAAACAACAGGAAAC TGAAATAAAGAATCAGGCAGCAAGTGCTGTTGAACAGGAATTTACATCCGGAAAAACTGACTATATAACAAATGAAGCAA AGAAACAATTAGAAAGTATTAAGCCGGTAATTGAGAGTGGTGTGAAAGCACAGTTTGTACAGAAGATGGCTGAAAAAAAT CCTGCAATCACAGATTATGATTCAGCAAAGACTTTTTTTGACCAGAATGTTGGAATGAAAGACGGAGCGGCTGAAGCATG TGTCAATGAACAGATTGATACAATAATAAATAACTTAGCTGGAAGTGTAGCATCAACAGCCAAGGATGCTTCTAAGATTG CAGCGGGAGAAGCAGCATATACAGCAGCAAGTCAGACAGCAGGAGAAGCAGCTTATACAGGAGCAAGCTTAGCAGCAGGA ACAGCAGCATATACAGCAGCAAGACAGACGGCAGGAGAAGCAGCATATGCGGGAGCAAGTTTAGCAGCAACAACAGCAGC CTATACAGGAGCAAGTCAGGCAGCAACAACAGCAGCCTATACAGGAGCAGTTTCAGGAGCTGAGCAGGCTACTATAACGT CTGCAGAGCAGACAAAAGCGACTGTAGCAGCCTCTATTAATCAAAAGCAGGCAAATGGATACAGTCTTGTAACAGGAATG AAGGCACTTGCAGATGGAACACAGACATTGTATAACTCAGTACCAACTCTCACAAGCGGTATCAAGCAGCTTGTAGACGG TTCAAACACACTTGTAGCAAACAATGCACAGCTCAACAGCGGAGCATCACAGCTTGCAGATGGAACAAATCAGATAGTCT CAGGTGTAGACCAGCTCACAACAGGCTCTAAGACACTTTCAGAGGGTGCACACACACTTGCAGATGGTATGGTACAGTTT AATGAGGAAGGAATCAACAAGATTCTCGACGCATACAACGGTGACTTAAAGCCATTCACCGACAAGCTTCAGGCAGTAAT TGATGCAGGTGAGGAATATCAGACATACTCAGCAATCGCTGATGGACAGACGGGCAGCGTTAAGTTCATATATAAATTAG CTTCAATAGATGCTAAAGCAGATAGCGACAAATAA
Upstream 100 bases:
>100_bases AGCTTAGTAATCTGATTAATCATAAATGAGGGATAAAATACTTTTTGACCCTCATAACATAAAAATATGACCTCAAAAAT AAAATCAGGAGGAATAAGAC
Downstream 100 bases:
>100_bases TTAATTAAAGGATGTTTAAAGATTATGGGAGGCAAAAATGGGCTGGATAGAATATCTGTTAATCGTGGCGGGAAGCTCAC TGGAGATTTTCGTTGCGATG
Product: transmembrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 864; Mature: 864
Protein sequence:
>864_residues MKLPELKEKLKSKYIVRVVAGVLTIALVGTGIGATAVFAEKNSTAVTAEADSTTGSSKDADDIADKLMDSVSLKDNDADK DESVYLISDANGNVNKTIVVDHLKNKDKKDTLEDASNLSDIENVKGKEKFTQSGDKLTWQAGGKDIYYQGTATEEPPVTQ KVTYYLDGKEISPEDLAGKSGKVKIRFDYTNTTSYTETVNGEKQTVSVPFAAVTGLVLGDGFENIEVTNGKAEVSDSSSV VLGYALPGLKDSLGIKDKDLDGDVNIPEYMEMTADVENFSMPAAMTFVVNASDYVSTDGIDTSDIDDMINDLKDASTQLQ DGSKTLAEGTDTLSDGLSTLQSKLGTFASGVGTLKSGLKTYTDGVSTLSGGLNKLNSNVPTLSNGITTLNSSAKSLNDGV ALLNATVSAKFTDSEKKTLLDQVHSTLESQKSEIEKQAQTTVASQKTAIQKQAQSAVDLQKTDIQKQAQSTVADQKEDIE KKAQAAVDDQKEQIKSVAAETVKQQETEIKNQAASAVEQEFTSGKTDYITNEAKKQLESIKPVIESGVKAQFVQKMAEKN PAITDYDSAKTFFDQNVGMKDGAAEACVNEQIDTIINNLAGSVASTAKDASKIAAGEAAYTAASQTAGEAAYTGASLAAG TAAYTAARQTAGEAAYAGASLAATTAAYTGASQAATTAAYTGAVSGAEQATITSAEQTKATVAASINQKQANGYSLVTGM KALADGTQTLYNSVPTLTSGIKQLVDGSNTLVANNAQLNSGASQLADGTNQIVSGVDQLTTGSKTLSEGAHTLADGMVQF NEEGINKILDAYNGDLKPFTDKLQAVIDAGEEYQTYSAIADGQTGSVKFIYKLASIDAKADSDK
Sequences:
>Translated_864_residues MKLPELKEKLKSKYIVRVVAGVLTIALVGTGIGATAVFAEKNSTAVTAEADSTTGSSKDADDIADKLMDSVSLKDNDADK DESVYLISDANGNVNKTIVVDHLKNKDKKDTLEDASNLSDIENVKGKEKFTQSGDKLTWQAGGKDIYYQGTATEEPPVTQ KVTYYLDGKEISPEDLAGKSGKVKIRFDYTNTTSYTETVNGEKQTVSVPFAAVTGLVLGDGFENIEVTNGKAEVSDSSSV VLGYALPGLKDSLGIKDKDLDGDVNIPEYMEMTADVENFSMPAAMTFVVNASDYVSTDGIDTSDIDDMINDLKDASTQLQ DGSKTLAEGTDTLSDGLSTLQSKLGTFASGVGTLKSGLKTYTDGVSTLSGGLNKLNSNVPTLSNGITTLNSSAKSLNDGV ALLNATVSAKFTDSEKKTLLDQVHSTLESQKSEIEKQAQTTVASQKTAIQKQAQSAVDLQKTDIQKQAQSTVADQKEDIE KKAQAAVDDQKEQIKSVAAETVKQQETEIKNQAASAVEQEFTSGKTDYITNEAKKQLESIKPVIESGVKAQFVQKMAEKN PAITDYDSAKTFFDQNVGMKDGAAEACVNEQIDTIINNLAGSVASTAKDASKIAAGEAAYTAASQTAGEAAYTGASLAAG TAAYTAARQTAGEAAYAGASLAATTAAYTGASQAATTAAYTGAVSGAEQATITSAEQTKATVAASINQKQANGYSLVTGM KALADGTQTLYNSVPTLTSGIKQLVDGSNTLVANNAQLNSGASQLADGTNQIVSGVDQLTTGSKTLSEGAHTLADGMVQF NEEGINKILDAYNGDLKPFTDKLQAVIDAGEEYQTYSAIADGQTGSVKFIYKLASIDAKADSDK >Mature_864_residues MKLPELKEKLKSKYIVRVVAGVLTIALVGTGIGATAVFAEKNSTAVTAEADSTTGSSKDADDIADKLMDSVSLKDNDADK DESVYLISDANGNVNKTIVVDHLKNKDKKDTLEDASNLSDIENVKGKEKFTQSGDKLTWQAGGKDIYYQGTATEEPPVTQ KVTYYLDGKEISPEDLAGKSGKVKIRFDYTNTTSYTETVNGEKQTVSVPFAAVTGLVLGDGFENIEVTNGKAEVSDSSSV VLGYALPGLKDSLGIKDKDLDGDVNIPEYMEMTADVENFSMPAAMTFVVNASDYVSTDGIDTSDIDDMINDLKDASTQLQ DGSKTLAEGTDTLSDGLSTLQSKLGTFASGVGTLKSGLKTYTDGVSTLSGGLNKLNSNVPTLSNGITTLNSSAKSLNDGV ALLNATVSAKFTDSEKKTLLDQVHSTLESQKSEIEKQAQTTVASQKTAIQKQAQSAVDLQKTDIQKQAQSTVADQKEDIE KKAQAAVDDQKEQIKSVAAETVKQQETEIKNQAASAVEQEFTSGKTDYITNEAKKQLESIKPVIESGVKAQFVQKMAEKN PAITDYDSAKTFFDQNVGMKDGAAEACVNEQIDTIINNLAGSVASTAKDASKIAAGEAAYTAASQTAGEAAYTGASLAAG TAAYTAARQTAGEAAYAGASLAATTAAYTGASQAATTAAYTGAVSGAEQATITSAEQTKATVAASINQKQANGYSLVTGM KALADGTQTLYNSVPTLTSGIKQLVDGSNTLVANNAQLNSGASQLADGTNQIVSGVDQLTTGSKTLSEGAHTLADGMVQF NEEGINKILDAYNGDLKPFTDKLQAVIDAGEEYQTYSAIADGQTGSVKFIYKLASIDAKADSDK
Specific function: Unknown
COG id: COG1511
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90431; Mature: 90431
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLPELKEKLKSKYIVRVVAGVLTIALVGTGIGATAVFAEKNSTAVTAEADSTTGSSKDA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCCCCCCH DDIADKLMDSVSLKDNDADKDESVYLISDANGNVNKTIVVDHLKNKDKKDTLEDASNLSD HHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH IENVKGKEKFTQSGDKLTWQAGGKDIYYQGTATEEPPVTQKVTYYLDGKEISPEDLAGKS HHHCCCHHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHCCCC GKVKIRFDYTNTTSYTETVNGEKQTVSVPFAAVTGLVLGDGFENIEVTNGKAEVSDSSSV CEEEEEEEECCCCCCEEECCCCCEEEECCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCE VLGYALPGLKDSLGIKDKDLDGDVNIPEYMEMTADVENFSMPAAMTFVVNASDYVSTDGI EEEEECCCCCHHCCCCCCCCCCCCCCHHHHHHHHCHHHCCCCEEEEEEEECCHHCCCCCC DTSDIDDMINDLKDASTQLQDGSKTLAEGTDTLSDGLSTLQSKLGTFASGVGTLKSGLKT CHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YTDGVSTLSGGLNKLNSNVPTLSNGITTLNSSAKSLNDGVALLNATVSAKFTDSEKKTLL HHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHCCCEEHEEEEEEEECCHHHHHHH DQVHSTLESQKSEIEKQAQTTVASQKTAIQKQAQSAVDLQKTDIQKQAQSTVADQKEDIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKAQAAVDDQKEQIKSVAAETVKQQETEIKNQAASAVEQEFTSGKTDYITNEAKKQLESI HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH KPVIESGVKAQFVQKMAEKNPAITDYDSAKTFFDQNVGMKDGAAEACVNEQIDTIINNLA HHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH GSVASTAKDASKIAAGEAAYTAASQTAGEAAYTGASLAAGTAAYTAARQTAGEAAYAGAS HHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHCCHHHHCCCH LAATTAAYTGASQAATTAAYTGAVSGAEQATITSAEQTKATVAASINQKQANGYSLVTGM HHHHHHHHCCCCHHHHHHHHHHCCCCCCHHEECCHHHHHHHHHHHCCHHCCCCHHHHHHH KALADGTQTLYNSVPTLTSGIKQLVDGSNTLVANNAQLNSGASQLADGTNQIVSGVDQLT HHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHCCHHHHHHHHHHHC TGSKTLSEGAHTLADGMVQFNEEGINKILDAYNGDLKPFTDKLQAVIDAGEEYQTYSAIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHC DGQTGSVKFIYKLASIDAKADSDK CCCCCCEEEEEEEHHCCCCCCCCC >Mature Secondary Structure MKLPELKEKLKSKYIVRVVAGVLTIALVGTGIGATAVFAEKNSTAVTAEADSTTGSSKDA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCCCCCCH DDIADKLMDSVSLKDNDADKDESVYLISDANGNVNKTIVVDHLKNKDKKDTLEDASNLSD HHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH IENVKGKEKFTQSGDKLTWQAGGKDIYYQGTATEEPPVTQKVTYYLDGKEISPEDLAGKS HHHCCCHHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHCCCC GKVKIRFDYTNTTSYTETVNGEKQTVSVPFAAVTGLVLGDGFENIEVTNGKAEVSDSSSV CEEEEEEEECCCCCCEEECCCCCEEEECCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCE VLGYALPGLKDSLGIKDKDLDGDVNIPEYMEMTADVENFSMPAAMTFVVNASDYVSTDGI EEEEECCCCCHHCCCCCCCCCCCCCCHHHHHHHHCHHHCCCCEEEEEEEECCHHCCCCCC DTSDIDDMINDLKDASTQLQDGSKTLAEGTDTLSDGLSTLQSKLGTFASGVGTLKSGLKT CHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YTDGVSTLSGGLNKLNSNVPTLSNGITTLNSSAKSLNDGVALLNATVSAKFTDSEKKTLL HHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHCCCEEHEEEEEEEECCHHHHHHH DQVHSTLESQKSEIEKQAQTTVASQKTAIQKQAQSAVDLQKTDIQKQAQSTVADQKEDIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKAQAAVDDQKEQIKSVAAETVKQQETEIKNQAASAVEQEFTSGKTDYITNEAKKQLESI HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH KPVIESGVKAQFVQKMAEKNPAITDYDSAKTFFDQNVGMKDGAAEACVNEQIDTIINNLA HHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH GSVASTAKDASKIAAGEAAYTAASQTAGEAAYTGASLAAGTAAYTAARQTAGEAAYAGAS HHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHCCHHHHCCCH LAATTAAYTGASQAATTAAYTGAVSGAEQATITSAEQTKATVAASINQKQANGYSLVTGM HHHHHHHHCCCCHHHHHHHHHHCCCCCCHHEECCHHHHHHHHHHHCCHHCCCCHHHHHHH KALADGTQTLYNSVPTLTSGIKQLVDGSNTLVANNAQLNSGASQLADGTNQIVSGVDQLT HHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHCCHHHHHHHHHHHC TGSKTLSEGAHTLADGMVQFNEEGINKILDAYNGDLKPFTDKLQAVIDAGEEYQTYSAIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHC DGQTGSVKFIYKLASIDAKADSDK CCCCCCEEEEEEEHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA