| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925358
Identifier: 238925358
GI number: 238925358
Start: 2891018
End: 2891599
Strand: Reverse
Name: 238925358
Synonym: EUBREC_3013
Alternate gene names: NA
Gene position: 2891599-2891018 (Counterclockwise)
Preceding gene: 238925359
Following gene: 238925357
Centisome position: 83.82
GC content: 43.13
Gene sequence:
>582_bases ATGGGCTGGATAGAATATCTGTTAATCGTGGCGGGAAGCTCACTGGAGATTTTCGTTGCGATGGAATGTCAGGGATCCCT GATCCAGAAAGTAAATAAGAAACAGCTTACAGCCATTTGCTTCATAGTTGCAGTTTGCCAGTTGTTAGCAATGTATATCG GGTATTTTCTGTCAAGCTTTCTTAATGGGAAATACTCGGTGAAGGATGAAGCACTTTTAGGAGAGATAATTTCTATCGGA ATACTGATAGGACTGGGGATCAGGCTTATAGGAAAGGCTATAAGAAACGAAAGGATTGAGGAGCATTGTCAGGCGCAGCT TGACATGAAAAGAGTGCTAAGAATAGCAGGAATCACCGCATTTTATACGGTTCTTGCAGGAATAGCATTCGGCTTCCTCG GTACCGGACTTTTCACCATTATGATAATGGTGGCGCTGCTCACTGTCATCTGCATAGTGGCAGGCATTTACACAGGATAT CATTTCGGTTTTGAGCAGAAGACAAAGGTATATATCGTGGGGGCGATACTCTTTTGGGCGGCTGGAATTGATGTGATAGT AAGGCTTGTAAGTGCAAAATAA
Upstream 100 bases:
>100_bases GGCAGCGTTAAGTTCATATATAAATTAGCTTCAATAGATGCTAAAGCAGATAGCGACAAATAATTAATTAAAGGATGTTT AAAGATTATGGGAGGCAAAA
Downstream 100 bases:
>100_bases TGCATAGGGCTCTGTTCGTAGGAACAGGGCTTTTTTGCTGTCCATTGAAGTATGAAATCCTTTGCTTGCAATGTCAAAGT AAATGCTATAGAATATTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MGWIEYLLIVAGSSLEIFVAMECQGSLIQKVNKKQLTAICFIVAVCQLLAMYIGYFLSSFLNGKYSVKDEALLGEIISIG ILIGLGIRLIGKAIRNERIEEHCQAQLDMKRVLRIAGITAFYTVLAGIAFGFLGTGLFTIMIMVALLTVICIVAGIYTGY HFGFEQKTKVYIVGAILFWAAGIDVIVRLVSAK
Sequences:
>Translated_193_residues MGWIEYLLIVAGSSLEIFVAMECQGSLIQKVNKKQLTAICFIVAVCQLLAMYIGYFLSSFLNGKYSVKDEALLGEIISIG ILIGLGIRLIGKAIRNERIEEHCQAQLDMKRVLRIAGITAFYTVLAGIAFGFLGTGLFTIMIMVALLTVICIVAGIYTGY HFGFEQKTKVYIVGAILFWAAGIDVIVRLVSAK >Mature_192_residues GWIEYLLIVAGSSLEIFVAMECQGSLIQKVNKKQLTAICFIVAVCQLLAMYIGYFLSSFLNGKYSVKDEALLGEIISIGI LIGLGIRLIGKAIRNERIEEHCQAQLDMKRVLRIAGITAFYTVLAGIAFGFLGTGLFTIMIMVALLTVICIVAGIYTGYH FGFEQKTKVYIVGAILFWAAGIDVIVRLVSAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21141; Mature: 21010
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWIEYLLIVAGSSLEIFVAMECQGSLIQKVNKKQLTAICFIVAVCQLLAMYIGYFLSSF CCHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNGKYSVKDEALLGEIISIGILIGLGIRLIGKAIRNERIEEHCQAQLDMKRVLRIAGITA HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FYTVLAGIAFGFLGTGLFTIMIMVALLTVICIVAGIYTGYHFGFEQKTKVYIVGAILFWA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH AGIDVIVRLVSAK HHHHHHHHHHHCC >Mature Secondary Structure GWIEYLLIVAGSSLEIFVAMECQGSLIQKVNKKQLTAICFIVAVCQLLAMYIGYFLSSF CHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNGKYSVKDEALLGEIISIGILIGLGIRLIGKAIRNERIEEHCQAQLDMKRVLRIAGITA HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FYTVLAGIAFGFLGTGLFTIMIMVALLTVICIVAGIYTGYHFGFEQKTKVYIVGAILFWA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH AGIDVIVRLVSAK HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA