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The map label for this gene is ycdQ [C]

Identifier: 238925279

GI number: 238925279

Start: 2816370

End: 2817683

Strand: Reverse

Name: ycdQ [C]

Synonym: EUBREC_2933

Alternate gene names: 238925279

Gene position: 2817683-2816370 (Counterclockwise)

Preceding gene: 238925280

Following gene: 238925278

Centisome position: 81.68

GC content: 42.85

Gene sequence:

>1314_bases
ATGGCGAAAATAGGAATTGTTATATGTAACTATAATAAACAAAATGATGTTATTGACTGTATACAGTCAGTTCTTGAATC
AAAATATGAGGATTATCACATCTATGTTGTGGATAACGCATCGACAGACGAGTCGGTGAGGTTGATAAGAGAGTGTTACG
GAAGCTGCGACAGGCTCACACTTATCGAAAACAGTGAAAATCTTGGAGGCTCTGGTGGCTTTAATACAGGGCTTCGCGTG
GCGATGGCTGAGGGACACATGTATCTGATGTGCGTAGACAATGACGCACTGCTTGACGAAAACTGTATAGGAACACTTTC
GGATTTCCTTGATTCACATGAGAAGGCAGGCATAGCGGCTGCAAAGATTTATCATACCGGGCAGGAAAATTATGTGCAGC
AGTATGGCTCGTTCATAGATTATGATAATTACAGCGTGGACTCGACGTATCTAAATCATATAGAGGATGGTTCAATGCCT
GATGTGGTATATTCTGATGCAGTCCCGGCATGCGCGCTCATGATAAGACGTACAGTTGTAGAACAGATTGGCGTCATGCC
TGAGGAGAATTTCCTCTATTGGGATGACACCGAGTGGTGTGTCAGGTGCAGGGAGGCAGGCTACGAGGTTGCATCTGTAG
GTGCAGCAGCGGCAAGTCATGCGATGGGGGCAAAAAAGGAGGATATTAATACATTTCCAACCTACTATGCATGGCGGAAC
TGGATCAAGTTCTTTTTAGACCATATTGATGAGGAAAGACTTTCAGATATGGCAGAGACATTTCTTGGCTCGATATTTGA
GATAAACTACACAGATCTATATCGCGGGGAAGAAAACCGCTCAAAAACAGTTATGGCGGCATTAGATGATGCACTTCACA
AAGTTATGGGAAAAGCGAAGGAGGACAGGATATTTAATCTGGAATTGACTTATGACGGGCTTGAGAGGGCGATAGGCGAT
AAGTCGGATATAGCTATAATGGCAGGTGAATTTCCGTTATATGCAGATGCACTTAAAGAAAAAATAAAAGTCATGTGGCC
TGATAAAAGGGTTTACATTGTTGGTTTGCAGGATATTGACGAAGCATATGGTACAGCACATTTTCAACCGGATGCCACAA
TCACCATCTGTGAGAGTATTTTCAGGCAGGATGACCTCAGCCTTTCCACATATGTGATGGACCTGGATGGAAATGTACTG
GTCGATGAGGATGACGTGCTCATGGTCATAAACTATAACTTCAGCCGCAGAAGTTTTATCTTTTCTATGAAGCCACTTTT
TATGAGGCTTTCAAGGCAAAATTACGGATTTTAA

Upstream 100 bases:

>100_bases
GTTCATTATATATTTTATATGTTCAGCAGGAACAGCTCGGCAGGATTCATTCAGATATAAGAACTGAATAATTGCCTGAT
AGAAAGGAATGTGCATAAAT

Downstream 100 bases:

>100_bases
AAAAATAGTAAAAAACATTGAAAAATATACAATTAGGCAATAAAATATAAACATAGTTTAACGATTTGGAGGACGAAAAA
ATGAAGAAATATGCATACGG

Product: Glycosyltransferase Family 2-like b-glycosyltransferase

Products: NA

Alternate protein names: Glycosyltransferase; Glycosyl Transferase; Family 2 Glycosyl Transferase; Rhamnosyl Transferase; Glycosyl Transferase Family 2 Protein; Glycosyl Transferase Group 2 Family Protein; Rhamnosyltransferase; Glycoside Transferase Family 2 Protein; Glycosyl Transferase Group 2 Family; Family 2 Glycosyltransferase; Glycosyltransferase/Rhamnosyltransferase; Glycosyl Transferase GT2 Family Protein; Group 2 Family Glycosyltransferase; Rhamnosyl Transferase Related Protein; Rhamnosyl Transferase RfbQ; Glycosyltransferase Family 2-Like B-Glycosyltransferase; Capsule-Related Glycosyltransferase

Number of amino acids: Translated: 437; Mature: 436

Protein sequence:

>437_residues
MAKIGIVICNYNKQNDVIDCIQSVLESKYEDYHIYVVDNASTDESVRLIRECYGSCDRLTLIENSENLGGSGGFNTGLRV
AMAEGHMYLMCVDNDALLDENCIGTLSDFLDSHEKAGIAAAKIYHTGQENYVQQYGSFIDYDNYSVDSTYLNHIEDGSMP
DVVYSDAVPACALMIRRTVVEQIGVMPEENFLYWDDTEWCVRCREAGYEVASVGAAAASHAMGAKKEDINTFPTYYAWRN
WIKFFLDHIDEERLSDMAETFLGSIFEINYTDLYRGEENRSKTVMAALDDALHKVMGKAKEDRIFNLELTYDGLERAIGD
KSDIAIMAGEFPLYADALKEKIKVMWPDKRVYIVGLQDIDEAYGTAHFQPDATITICESIFRQDDLSLSTYVMDLDGNVL
VDEDDVLMVINYNFSRRSFIFSMKPLFMRLSRQNYGF

Sequences:

>Translated_437_residues
MAKIGIVICNYNKQNDVIDCIQSVLESKYEDYHIYVVDNASTDESVRLIRECYGSCDRLTLIENSENLGGSGGFNTGLRV
AMAEGHMYLMCVDNDALLDENCIGTLSDFLDSHEKAGIAAAKIYHTGQENYVQQYGSFIDYDNYSVDSTYLNHIEDGSMP
DVVYSDAVPACALMIRRTVVEQIGVMPEENFLYWDDTEWCVRCREAGYEVASVGAAAASHAMGAKKEDINTFPTYYAWRN
WIKFFLDHIDEERLSDMAETFLGSIFEINYTDLYRGEENRSKTVMAALDDALHKVMGKAKEDRIFNLELTYDGLERAIGD
KSDIAIMAGEFPLYADALKEKIKVMWPDKRVYIVGLQDIDEAYGTAHFQPDATITICESIFRQDDLSLSTYVMDLDGNVL
VDEDDVLMVINYNFSRRSFIFSMKPLFMRLSRQNYGF
>Mature_436_residues
AKIGIVICNYNKQNDVIDCIQSVLESKYEDYHIYVVDNASTDESVRLIRECYGSCDRLTLIENSENLGGSGGFNTGLRVA
MAEGHMYLMCVDNDALLDENCIGTLSDFLDSHEKAGIAAAKIYHTGQENYVQQYGSFIDYDNYSVDSTYLNHIEDGSMPD
VVYSDAVPACALMIRRTVVEQIGVMPEENFLYWDDTEWCVRCREAGYEVASVGAAAASHAMGAKKEDINTFPTYYAWRNW
IKFFLDHIDEERLSDMAETFLGSIFEINYTDLYRGEENRSKTVMAALDDALHKVMGKAKEDRIFNLELTYDGLERAIGDK
SDIAIMAGEFPLYADALKEKIKVMWPDKRVYIVGLQDIDEAYGTAHFQPDATITICESIFRQDDLSLSTYVMDLDGNVLV
DEDDVLMVINYNFSRRSFIFSMKPLFMRLSRQNYGF

Specific function: Unknown

COG id: COG1216

COG function: function code R; Predicted glycosyltransferases

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49660; Mature: 49529

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIGIVICNYNKQNDVIDCIQSVLESKYEDYHIYVVDNASTDESVRLIRECYGSCDRLT
CCEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEE
LIENSENLGGSGGFNTGLRVAMAEGHMYLMCVDNDALLDENCIGTLSDFLDSHEKAGIAA
EEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEE
AKIYHTGQENYVQQYGSFIDYDNYSVDSTYLNHIEDGSMPDVVYSDAVPACALMIRRTVV
EEEEECCHHHHHHHHCCEECCCCCCCCHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHH
EQIGVMPEENFLYWDDTEWCVRCREAGYEVASVGAAAASHAMGAKKEDINTFPTYYAWRN
HHHCCCCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
WIKFFLDHIDEERLSDMAETFLGSIFEINYTDLYRGEENRSKTVMAALDDALHKVMGKAK
HHHHHHHHCCHHHHHHHHHHHHHHHEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC
EDRIFNLELTYDGLERAIGDKSDIAIMAGEFPLYADALKEKIKVMWPDKRVYIVGLQDID
CCEEEEEEEEHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHEEECCCCEEEEEEHHHHH
EAYGTAHFQPDATITICESIFRQDDLSLSTYVMDLDGNVLVDEDDVLMVINYNFSRRSFI
HHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCEEECCCCEEEEEECCCCCCEEE
FSMKPLFMRLSRQNYGF
EEHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AKIGIVICNYNKQNDVIDCIQSVLESKYEDYHIYVVDNASTDESVRLIRECYGSCDRLT
CEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEE
LIENSENLGGSGGFNTGLRVAMAEGHMYLMCVDNDALLDENCIGTLSDFLDSHEKAGIAA
EEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEE
AKIYHTGQENYVQQYGSFIDYDNYSVDSTYLNHIEDGSMPDVVYSDAVPACALMIRRTVV
EEEEECCHHHHHHHHCCEECCCCCCCCHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHH
EQIGVMPEENFLYWDDTEWCVRCREAGYEVASVGAAAASHAMGAKKEDINTFPTYYAWRN
HHHCCCCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
WIKFFLDHIDEERLSDMAETFLGSIFEINYTDLYRGEENRSKTVMAALDDALHKVMGKAK
HHHHHHHHCCHHHHHHHHHHHHHHHEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC
EDRIFNLELTYDGLERAIGDKSDIAIMAGEFPLYADALKEKIKVMWPDKRVYIVGLQDID
CCEEEEEEEEHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHEEECCCCEEEEEEHHHHH
EAYGTAHFQPDATITICESIFRQDDLSLSTYVMDLDGNVLVDEDDVLMVINYNFSRRSFI
HHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCEEECCCCEEEEEECCCCCCEEE
FSMKPLFMRLSRQNYGF
EEHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA