| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925268
Identifier: 238925268
GI number: 238925268
Start: 2803919
End: 2805052
Strand: Reverse
Name: 238925268
Synonym: EUBREC_2922
Alternate gene names: NA
Gene position: 2805052-2803919 (Counterclockwise)
Preceding gene: 238925269
Following gene: 238925267
Centisome position: 81.31
GC content: 48.06
Gene sequence:
>1134_bases ATGAACATATGGCTAAAGTTAAGGAAAACAGCTGCAATTACACTATGTGAATTACTTGCAATTGCTACAATTTTTACAGG CTGTGCCTCCGCTGATTTATCCGGCACTGAAGGTGCCGGGCATGCCGCAGGAGCTGTAGTGGCAGGTGAGGATTCTTCCG GTGCTTTAGGCAGCAAGGATAACGCGGATGGGCCACAGGAGGATCTTGTAAACAACAATTCCTACGTTTCCATCGATGCT ATTCCGGCATATGATGGCAAGGCATATGTGGCTGTCAACAATAATGAGCCTTTTTTTACGGACAGCGATATGACTACCAC TGCTTTTGAAAATTACAGTGATTTGGATTCACTTGGCAGATGCGGTGTGGCTTATGCCAATATCTGCAGAGATATCATGC CGACTGAGGAGCGTGGCAAGATAGGCATGATAAAGCCATCAGGCTGGCATACGGTGAAGTATGATGTGATAAAGGACAGG TATTTATATAATCGCTGTCATCTTATTGGCTATCAGCTTGCCGGCGAGAATGCCAATCCGAAGAATCTTATTACCGGTAC GAGATACCTGAATGTGGAGGGCATGCTGCCGTTTGAGAATCTGGTAGCGGATTATGTAAACAATACAGGAAATCATGTGC TTTACAGAGTGACTCCGATGTTCTCGGGCAGCAATCTAGTTGCAAACGGCGTTCTCATAGAGGCAAAGTCGGTTGAGGAT AACGGTGGCGGCATACTTTTTAATGTATATTGCTATAATGTGCAGCCCGGAGTCGGAATAAACTATGAGAATGGTGACAG CTGGCTGGATGGCACCACTCCGCAGAAGCAGAGCGCTCAGACGGATACACCGCAGAATGAAGGTTCGCAGAGCAGCGCTG GAAGCGGGGCAGGAGAATCCGGCTCTTCAGGCAGTACAACAGGAAGTGCATCATCAGGTTCAGACAGCTCAGCAGCAGAA AATAGCGCTGCAGATTCCTCAAACAGCGAGACTATGGTTCATATCACAGCAACCGGCAAGAAATATCACCGTGCGGGCTG TCGGACCTTGAAAAAGAGTGACACAGAGGTAACGCTTGATGAAGCAAAATCCATGGGCTTGTCACCGTGCGGCATCTGCA ATCCGCCACAGTAG
Upstream 100 bases:
>100_bases AAATAAAAGTATATTAGGTTTAGTAATTTAAGTATTTATTTAATTTATTGTAATTAGGGAAAATCCAATATCAATCGATT GATAGAAAGAGTGATTTTAT
Downstream 100 bases:
>100_bases ATGTGCATTAGCATTTGCAATCCGCCACAGTAGATGTGCATTAGCATTTGTAATTCACCGCAGTAGATGTGCATTAGCAT TTGCAATCCACCTCAGTAGA
Product: extracellular/cell surface DNA-entry nuclease precursor
Products: NA
Alternate protein names: Prophage Lp1 Protein; DNA Nuclease; Endonuclease; DNA/RNA Non-Specific Endonuclease; Extracellular/Cell Surface DNA-Entry Nuclease; Membrane Nuclease; DNA-Entry Nuclease EndA; Deoxyribonuclease; DTDP-D-Glucose 4 6-Dehydratase; StreptodoRNAse; Prophage Nuclease
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MNIWLKLRKTAAITLCELLAIATIFTGCASADLSGTEGAGHAAGAVVAGEDSSGALGSKDNADGPQEDLVNNNSYVSIDA IPAYDGKAYVAVNNNEPFFTDSDMTTTAFENYSDLDSLGRCGVAYANICRDIMPTEERGKIGMIKPSGWHTVKYDVIKDR YLYNRCHLIGYQLAGENANPKNLITGTRYLNVEGMLPFENLVADYVNNTGNHVLYRVTPMFSGSNLVANGVLIEAKSVED NGGGILFNVYCYNVQPGVGINYENGDSWLDGTTPQKQSAQTDTPQNEGSQSSAGSGAGESGSSGSTTGSASSGSDSSAAE NSAADSSNSETMVHITATGKKYHRAGCRTLKKSDTEVTLDEAKSMGLSPCGICNPPQ
Sequences:
>Translated_377_residues MNIWLKLRKTAAITLCELLAIATIFTGCASADLSGTEGAGHAAGAVVAGEDSSGALGSKDNADGPQEDLVNNNSYVSIDA IPAYDGKAYVAVNNNEPFFTDSDMTTTAFENYSDLDSLGRCGVAYANICRDIMPTEERGKIGMIKPSGWHTVKYDVIKDR YLYNRCHLIGYQLAGENANPKNLITGTRYLNVEGMLPFENLVADYVNNTGNHVLYRVTPMFSGSNLVANGVLIEAKSVED NGGGILFNVYCYNVQPGVGINYENGDSWLDGTTPQKQSAQTDTPQNEGSQSSAGSGAGESGSSGSTTGSASSGSDSSAAE NSAADSSNSETMVHITATGKKYHRAGCRTLKKSDTEVTLDEAKSMGLSPCGICNPPQ >Mature_377_residues MNIWLKLRKTAAITLCELLAIATIFTGCASADLSGTEGAGHAAGAVVAGEDSSGALGSKDNADGPQEDLVNNNSYVSIDA IPAYDGKAYVAVNNNEPFFTDSDMTTTAFENYSDLDSLGRCGVAYANICRDIMPTEERGKIGMIKPSGWHTVKYDVIKDR YLYNRCHLIGYQLAGENANPKNLITGTRYLNVEGMLPFENLVADYVNNTGNHVLYRVTPMFSGSNLVANGVLIEAKSVED NGGGILFNVYCYNVQPGVGINYENGDSWLDGTTPQKQSAQTDTPQNEGSQSSAGSGAGESGSSGSTTGSASSGSDSSAAE NSAADSSNSETMVHITATGKKYHRAGCRTLKKSDTEVTLDEAKSMGLSPCGICNPPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39693; Mature: 39693
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIWLKLRKTAAITLCELLAIATIFTGCASADLSGTEGAGHAAGAVVAGEDSSGALGSKD CCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC NADGPQEDLVNNNSYVSIDAIPAYDGKAYVAVNNNEPFFTDSDMTTTAFENYSDLDSLGR CCCCCHHHHCCCCCEEEEEEEECCCCEEEEEECCCCCEEECCCCEEHHHCCHHHHHHHHC CGVAYANICRDIMPTEERGKIGMIKPSGWHTVKYDVIKDRYLYNRCHLIGYQLAGENANP CCHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEHHHHHHHHCEEEEEEEEEECCCCCC KNLITGTRYLNVEGMLPFENLVADYVNNTGNHVLYRVTPMFSGSNLVANGVLIEAKSVED CCEEECEEEEEEECCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCEEECCEEEEEECCCC NGGGILFNVYCYNVQPGVGINYENGDSWLDGTTPQKQSAQTDTPQNEGSQSSAGSGAGES CCCEEEEEEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSSGSTTGSASSGSDSSAAENSAADSSNSETMVHITATGKKYHRAGCRTLKKSDTEVTLD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEHH EAKSMGLSPCGICNPPQ HHHHCCCCCCCCCCCCC >Mature Secondary Structure MNIWLKLRKTAAITLCELLAIATIFTGCASADLSGTEGAGHAAGAVVAGEDSSGALGSKD CCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC NADGPQEDLVNNNSYVSIDAIPAYDGKAYVAVNNNEPFFTDSDMTTTAFENYSDLDSLGR CCCCCHHHHCCCCCEEEEEEEECCCCEEEEEECCCCCEEECCCCEEHHHCCHHHHHHHHC CGVAYANICRDIMPTEERGKIGMIKPSGWHTVKYDVIKDRYLYNRCHLIGYQLAGENANP CCHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEHHHHHHHHCEEEEEEEEEECCCCCC KNLITGTRYLNVEGMLPFENLVADYVNNTGNHVLYRVTPMFSGSNLVANGVLIEAKSVED CCEEECEEEEEEECCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCEEECCEEEEEECCCC NGGGILFNVYCYNVQPGVGINYENGDSWLDGTTPQKQSAQTDTPQNEGSQSSAGSGAGES CCCEEEEEEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSSGSTTGSASSGSDSSAAENSAADSSNSETMVHITATGKKYHRAGCRTLKKSDTEVTLD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEHH EAKSMGLSPCGICNPPQ HHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA