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The map label for this gene is yccM [C]

Identifier: 238924386

GI number: 238924386

Start: 1914823

End: 1915710

Strand: Direct

Name: yccM [C]

Synonym: EUBREC_2027

Alternate gene names: 238924386

Gene position: 1914823-1915710 (Clockwise)

Preceding gene: 238924385

Following gene: 238924387

Centisome position: 55.51

GC content: 41.67

Gene sequence:

>888_bases
TTGGATAAGAAAAAGAAATTACTATCAAAAAAGCTGGCAAAAATACGTGGATGGATACAGGCCGCAGCAACGCTGCTGAC
CAATATTCATATTCCGAATTTATTTAAGGGTAAAATATATCAGGGCAATGCAAAAACAGTATGCGTACCCGGATTAAACT
GCTACTCCTGCCCTGCCGCGACAGGAGCCTGTCCAATAGGGGCATTTCAGGCAGTCGTCGGATCATCAAGATTTAAGTTT
TCATACTACATAACCGGATTTTTTATTTTACTCGGTGTAACTCTCGGCAGATTTATATGTGGTTTTTTGTGCCCATTTGG
ATGGTTTCAGGATTTACTTCACAAAATACCCGGAAAGAAATTATCCACAGCCAAACTAAAGCCTCTTAGGTACCTAAAAT
ATGTAATTCTTATTGTTTTCGTTATACTTCTTCCGATGCTTGTAACGAACTCTATAGGAATGGGAGACCCGTTCTTCTGC
AAATATATCTGTCCTCAGGGTGTTTTAGAGGGTGCTATACCGTTATCTATTGGAAACGCTGCTATCCGTTCTGCGCTGGG
AAAGCTTTTTTCTTTCAAGTGTATGATTTTAATTGCAGTGATTGTACTAAGTATCCTATTTTACAGGCCCTTCTGTAAAT
GGATTTGTCCGCTTGGAGCAATCTACTCGTTATTTAATAAGGTCAGCCTGCTCAAAATCACCGTTGATAGCAGCAAATGT
GTCGGATGCGGTCAATGCTCAAAGGCCTGTAAGATGGATGTGGATGTGTGTAAGACACCGGATCACCCCGAGTGCATACG
CTGCGGTGCCTGCATAAAGGCCTGTCCGAAGGACGCCATCTGCTACCGGTTTATGGGAAAATCATGTCAAAAAAATGACA
ACAGATAA

Upstream 100 bases:

>100_bases
CTTATCCTTGGTGTATCCATGGTAAGCTATGGTGCAGTCAGAGGTGAGGCAGCTACCGTGCTTGGTAAAGCAATAAAACT
ATGTCTGGAGTGTGTCGGAA

Downstream 100 bases:

>100_bases
CTATTAAACATTTTACTATTATTTTTAAAGGAGAAATTACTCATGAAAAACAAATTATCATTTATTTCTATTTTTACACT
CTGCATAGCATTATCACTTA

Product: putative iron-sulfur-binding membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MDKKKKLLSKKLAKIRGWIQAAATLLTNIHIPNLFKGKIYQGNAKTVCVPGLNCYSCPAATGACPIGAFQAVVGSSRFKF
SYYITGFFILLGVTLGRFICGFLCPFGWFQDLLHKIPGKKLSTAKLKPLRYLKYVILIVFVILLPMLVTNSIGMGDPFFC
KYICPQGVLEGAIPLSIGNAAIRSALGKLFSFKCMILIAVIVLSILFYRPFCKWICPLGAIYSLFNKVSLLKITVDSSKC
VGCGQCSKACKMDVDVCKTPDHPECIRCGACIKACPKDAICYRFMGKSCQKNDNR

Sequences:

>Translated_295_residues
MDKKKKLLSKKLAKIRGWIQAAATLLTNIHIPNLFKGKIYQGNAKTVCVPGLNCYSCPAATGACPIGAFQAVVGSSRFKF
SYYITGFFILLGVTLGRFICGFLCPFGWFQDLLHKIPGKKLSTAKLKPLRYLKYVILIVFVILLPMLVTNSIGMGDPFFC
KYICPQGVLEGAIPLSIGNAAIRSALGKLFSFKCMILIAVIVLSILFYRPFCKWICPLGAIYSLFNKVSLLKITVDSSKC
VGCGQCSKACKMDVDVCKTPDHPECIRCGACIKACPKDAICYRFMGKSCQKNDNR
>Mature_295_residues
MDKKKKLLSKKLAKIRGWIQAAATLLTNIHIPNLFKGKIYQGNAKTVCVPGLNCYSCPAATGACPIGAFQAVVGSSRFKF
SYYITGFFILLGVTLGRFICGFLCPFGWFQDLLHKIPGKKLSTAKLKPLRYLKYVILIVFVILLPMLVTNSIGMGDPFFC
KYICPQGVLEGAIPLSIGNAAIRSALGKLFSFKCMILIAVIVLSILFYRPFCKWICPLGAIYSLFNKVSLLKITVDSSKC
VGCGQCSKACKMDVDVCKTPDHPECIRCGACIKACPKDAICYRFMGKSCQKNDNR

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1787226, Length=200, Percent_Identity=24.5, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32452; Mature: 32452

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
7.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
9.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKKKLLSKKLAKIRGWIQAAATLLTNIHIPNLFKGKIYQGNAKTVCVPGLNCYSCPAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEECCCCCCCCCCC
TGACPIGAFQAVVGSSRFKFSYYITGFFILLGVTLGRFICGFLCPFGWFQDLLHKIPGKK
CCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LSTAKLKPLRYLKYVILIVFVILLPMLVTNSIGMGDPFFCKYICPQGVLEGAIPLSIGNA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCHHHHHCCCCCHHHHHH
AIRSALGKLFSFKCMILIAVIVLSILFYRPFCKWICPLGAIYSLFNKVSLLKITVDSSKC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
VGCGQCSKACKMDVDVCKTPDHPECIRCGACIKACPKDAICYRFMGKSCQKNDNR
CCCHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHCCCCCC
>Mature Secondary Structure
MDKKKKLLSKKLAKIRGWIQAAATLLTNIHIPNLFKGKIYQGNAKTVCVPGLNCYSCPAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEECCCCCCCCCCC
TGACPIGAFQAVVGSSRFKFSYYITGFFILLGVTLGRFICGFLCPFGWFQDLLHKIPGKK
CCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LSTAKLKPLRYLKYVILIVFVILLPMLVTNSIGMGDPFFCKYICPQGVLEGAIPLSIGNA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCHHHHHCCCCCHHHHHH
AIRSALGKLFSFKCMILIAVIVLSILFYRPFCKWICPLGAIYSLFNKVSLLKITVDSSKC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
VGCGQCSKACKMDVDVCKTPDHPECIRCGACIKACPKDAICYRFMGKSCQKNDNR
CCCHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]