| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238924381
Identifier: 238924381
GI number: 238924381
Start: 1910489
End: 1911544
Strand: Direct
Name: 238924381
Synonym: EUBREC_2022
Alternate gene names: NA
Gene position: 1910489-1911544 (Clockwise)
Preceding gene: 238924374
Following gene: 238924385
Centisome position: 55.38
GC content: 35.04
Gene sequence:
>1056_bases ATGACCTCATCATATACTGTCAAAAACATCATAGAGCAGGATAATATAAACAGTACAATCAATTCATACATCAAAATACT TACACCAATACAGTTCACACTCGAAACGTGTAATATAGCTAACGATGACAAATATCTGAATTTTTTGATGACCTCACCAC GTGAAAATACATTTTACAGCTTCAAAACAGAAAAGGAAATCAATCATTTTAATATGAGGCCTCCACATATTCATGATTTT TACGAACTTCTTATTGTATTGGATGGCGAAATCCATCAGCTGATTGAAAAGACTGATTTTGTGTTCCACAGTGGAAGCTG TTGCCTGATGAACCACAATATAGTACACAAAGAAATTTTTTCTTCCGATGCAACTCTTTTGTTTATCGGGATGTCAAAAG AGCTTGTCCAACAGCTTTCAGAAGATGAACCAAAAGTTTATTTTCCGGATATAGAAAGGCCCGGCCATAACCCTATTCTT AGGTTTCTTTCAGATAATCTCGATAATCCTGACACAAAGGAATATCTTGATTTTATGCCATCTCTAAATAACAAAGACTG GCACCATACTCTCCACGCCATAACTGACAATATACTTCGTGCCATTATGTATCCAAAGCTTGGTTCTACTTATGTCATAA AAGGAATGCTTTTAGAATTGTTTGATTATCTGTCCAATCCAGAACACTTTCATTTCACGCCCGTCCATGTAGAAGCAGAC AATGATTTTCTTCTTTTCACACACATAAGTCACATTTTAGAGGACACCAATGGACGCATTACACGTTCTGAGCTTGAACA ATTATTAAATTACAGTGGAAATTATTTAAACTCTATAGTTAAGAAATATACAAATTCATGCCTATTCGATTACAGTCAGA CTTTCTGTATGAAAAGAGCGGCTGCTCTCCTGCTTGAAACGACCGCTTCTATATCTGAAATTATGGATGAACTGCATTTT ACGAATACAACACATTTTTATAAGTGCTTCAAAGAACATTATCATATGACACCGAAGCAATATAGGATTTCGATGAAAAT AAAACTTGTGCCATAG
Upstream 100 bases:
>100_bases TGTTACTTTAATAAATTATTGCTTACAATTCTATAACATATGTGATAAAATATCAGTTAGTTTTTATCATATTCGTGGAT AAGGAGAAAAATATACCATT
Downstream 100 bases:
>100_bases TTGCAAAATGTTCCTCATCCTGTATCCTTCAGCCAGATTTTTTGTGAATATTCAATTTTTTCAAAATCCATATAAGCATT CTTTAAAAGCATTTATTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MTSSYTVKNIIEQDNINSTINSYIKILTPIQFTLETCNIANDDKYLNFLMTSPRENTFYSFKTEKEINHFNMRPPHIHDF YELLIVLDGEIHQLIEKTDFVFHSGSCCLMNHNIVHKEIFSSDATLLFIGMSKELVQQLSEDEPKVYFPDIERPGHNPIL RFLSDNLDNPDTKEYLDFMPSLNNKDWHHTLHAITDNILRAIMYPKLGSTYVIKGMLLELFDYLSNPEHFHFTPVHVEAD NDFLLFTHISHILEDTNGRITRSELEQLLNYSGNYLNSIVKKYTNSCLFDYSQTFCMKRAAALLLETTASISEIMDELHF TNTTHFYKCFKEHYHMTPKQYRISMKIKLVP
Sequences:
>Translated_351_residues MTSSYTVKNIIEQDNINSTINSYIKILTPIQFTLETCNIANDDKYLNFLMTSPRENTFYSFKTEKEINHFNMRPPHIHDF YELLIVLDGEIHQLIEKTDFVFHSGSCCLMNHNIVHKEIFSSDATLLFIGMSKELVQQLSEDEPKVYFPDIERPGHNPIL RFLSDNLDNPDTKEYLDFMPSLNNKDWHHTLHAITDNILRAIMYPKLGSTYVIKGMLLELFDYLSNPEHFHFTPVHVEAD NDFLLFTHISHILEDTNGRITRSELEQLLNYSGNYLNSIVKKYTNSCLFDYSQTFCMKRAAALLLETTASISEIMDELHF TNTTHFYKCFKEHYHMTPKQYRISMKIKLVP >Mature_350_residues TSSYTVKNIIEQDNINSTINSYIKILTPIQFTLETCNIANDDKYLNFLMTSPRENTFYSFKTEKEINHFNMRPPHIHDFY ELLIVLDGEIHQLIEKTDFVFHSGSCCLMNHNIVHKEIFSSDATLLFIGMSKELVQQLSEDEPKVYFPDIERPGHNPILR FLSDNLDNPDTKEYLDFMPSLNNKDWHHTLHAITDNILRAIMYPKLGSTYVIKGMLLELFDYLSNPEHFHFTPVHVEADN DFLLFTHISHILEDTNGRITRSELEQLLNYSGNYLNSIVKKYTNSCLFDYSQTFCMKRAAALLLETTASISEIMDELHFT NTTHFYKCFKEHYHMTPKQYRISMKIKLVP
Specific function: Unknown
COG id: COG2207
COG function: function code K; AraC-type DNA-binding domain-containing proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41149; Mature: 41018
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSYTVKNIIEQDNINSTINSYIKILTPIQFTLETCNIANDDKYLNFLMTSPRENTFYS CCCCHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCHHEEEEECCCCCCCEEE FKTEKEINHFNMRPPHIHDFYELLIVLDGEIHQLIEKTDFVFHSGSCCLMNHNIVHKEIF EECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCEEECCCEEEEECCHHHHHHH SSDATLLFIGMSKELVQQLSEDEPKVYFPDIERPGHNPILRFLSDNLDNPDTKEYLDFMP CCCCEEEEEECCHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHCC SLNNKDWHHTLHAITDNILRAIMYPKLGSTYVIKGMLLELFDYLSNPEHFHFTPVHVEAD CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECC NDFLLFTHISHILEDTNGRITRSELEQLLNYSGNYLNSIVKKYTNSCLFDYSQTFCMKRA CCEEHHHHHHHHHHCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AALLLETTASISEIMDELHFTNTTHFYKCFKEHYHMTPKQYRISMKIKLVP HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHEEEEEEEEECC >Mature Secondary Structure TSSYTVKNIIEQDNINSTINSYIKILTPIQFTLETCNIANDDKYLNFLMTSPRENTFYS CCCHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCHHEEEEECCCCCCCEEE FKTEKEINHFNMRPPHIHDFYELLIVLDGEIHQLIEKTDFVFHSGSCCLMNHNIVHKEIF EECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCEEECCCEEEEECCHHHHHHH SSDATLLFIGMSKELVQQLSEDEPKVYFPDIERPGHNPILRFLSDNLDNPDTKEYLDFMP CCCCEEEEEECCHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHCC SLNNKDWHHTLHAITDNILRAIMYPKLGSTYVIKGMLLELFDYLSNPEHFHFTPVHVEAD CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECC NDFLLFTHISHILEDTNGRITRSELEQLLNYSGNYLNSIVKKYTNSCLFDYSQTFCMKRA CCEEHHHHHHHHHHCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AALLLETTASISEIMDELHFTNTTHFYKCFKEHYHMTPKQYRISMKIKLVP HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA