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The map label for this gene is yhfK [H]

Identifier: 238921512

GI number: 238921512

Start: 3548877

End: 3550949

Strand: Reverse

Name: yhfK [H]

Synonym: NT01EI_3664

Alternate gene names: 238921512

Gene position: 3550949-3548877 (Counterclockwise)

Preceding gene: 238921513

Following gene: 238921505

Centisome position: 93.14

GC content: 60.44

Gene sequence:

>2073_bases
ATGTGGCGGCGCTTTATCTACCACCCTGAAGTGAACTATGCCCTGCGCCAGACGCTGGTTTTGTGTCTGCCGGTGCTGTT
CGGGCTGATGGTAGGCCAGCTGCAGCAGGGGCTGCTGTTTTCTCTGGTACCGGTCTGCTGTAATATCGCCGGTCTTGACA
CCCCCCATAAACGCTTCTTTAAACGCCTCGCAGTGGGTGGCACCCTGTTCGCGCTCGGCAGCCTTTTATTGCAGATGGCC
CTGCTCTGGTCGGTACCGTTGCCGCTGGCCATGCTGCTGTTGGCACTGCTGTTTGGTGTCAATGGCGAGATCAGTCCGTT
GCACGCCCGTTTACTGCCGGCAACGCTGGTCGCTGCCATCTTTACCCTCAGCATTGTAGGGATGGTACCAATCTGGCAGG
GGCCGCTGCTGTATTTGGTCGGTACGATTTGGTACGGCGCCTTTACCTGGTTTTGGTTTGTTCTGTGGAAAGGGCAGCCG
ATCCGCGAAACCCTGAATCAGCTGTACCTGGAGCTGGCGGATTACATTGAGGCCAAGTACAGCCTGCTCACGCAGCACAG
CGATCCGCAGACGGCGCTGCCGCCGCTGTTGAACCGTCAGCAAAAGGTGATGGACCTTATCAGCGTTATTTACCAGCAGA
TGCACATGCTGTCCCTGGTCCATAACCCGGAGTATAAGAGGTTGGTGCGCTACTTTCAGGTGGCGCTGGATTTACAGGAG
CATATTACCGTAAGCCTCTCCCAGCCGGAGGAGGTACAAACGCTGGTGGCACAGAGCCAGGCCGAGGCGATTATTCGCCG
CAACGCGCAGGTAGTGGCCGGACGCCTGAGAGTGCTGGCGGATGATATCCAGTACCACCGCTATCCACAGCATTTCTCTA
TGCGCAGCGAGGTATCGGCGCTGGAAAAGCTGGCCAGCCGCTACCCGGATAATCCGGTTGGCCAGTTCTGTCTGCACCAC
TTTAGCCGGATGGGGCGTCTGCTGGAGCGGCAGCGTCCGCTCTATCAGCGCCAGCTGATGGCGACCCAGCAACGTCTGCC
GTTCTGGCCGGCACTGCGTGCCTACTGTTCCCTGAAGTCTGGCGCGCTACGCAACGCGCTGCGTCTGGGACTGACGCTGA
CGGCTGGCAGCGGGCTGGGGATCCTGCTGGCGCTGCCTAAGCCCTATTGGATCATGCTGACCACCATGCTGGTGATCCAG
AATGGCTATAATGCGACGCGGGTGCGTATTCAGCACCGGGCGATGGGCACCTTTGCCGGTCTGATCATCGCCGCCGGTCT
GCTGCAGCTGACGCTGAGCGAATATGCGATGTTGCTGGTGATGCTGCTGGTGACGCTGGGCGCCTACCTGGCGCTGCGTA
AGAATTACGGTCTGGCGGTGATAGGCTTTACGGTCAGCGCCGTATTCACCCTGCAGCTATTGGCGCTGAACGGCTCGCAC
TTCCTGGTGCCGCGCCTGGTGGATACGCTGCTGGGCTGTATTCTGGCCTTCGCCAGCACCATCTGGTTGTGGCCGCAGTG
GCAGAGCGGCCTGCTGCGTAAAAACGCCCACCAGGCGCTGGAGGCCTACCAGGATGAGCTGCGCCTGCTGCTCTCTGCCG
AACCGGGGGTCAGTGAGCTGGCCTATGCCCGGATGCGCAGCAACCAGGCGCAGAATACGCTCTACTCCTCGCTGAGCCAA
GCGATGCAGGAGCCGGGATTTGATTCGCGCTACCTGGCGGATATGCGTCTGTGGATCAGCCACAGCCAGTTTATTGTCGA
GCATTTGAATGCCATGACGATTTTGGCGCGCGAGCACTATATGCTGACGCCGCGCCTGGCACAGGACTATCTGCAATGTG
GCGAGATCGCGCTGCAGCTGTGCCAGCAGCGTCTGGAGCACGATGGCCCGAGCAGCAACGACAGCCAGGCGGTTCCGATA
CCGGAGCCGCAGCAGGGGATGCCGATGACGCCGATGGAGGTGCATCTGCGCCGCATTCTGTCGCACCTGCGTACCATGCA
TACCATTTCATCTATCGCCTGGCGCCAGCGCCCGCATCACGGGCTGTGGCTCAGCCGCCGACTGCGCGACTGA

Upstream 100 bases:

>100_bases
GGCACACGGTAAAACCATCGTCGTCTACGGGACGCGTTGATTTTGCGCCCGCGCCGCACGAGCGGCGCGGAATCTTCAAC
CCATCCCCAGGATGGTGCTC

Downstream 100 bases:

>100_bases
GCCGGGGAGCCGACGCGTTAGCCGCGCTGGCCGTAGTAGGCATCCGGTCCGTGCTTGCGCCGGAAATGTTTATCGTGCAG
CGCCCGATCCATCGGGGCGA

Product: integral membrane protein, YccS/YhfK family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 690; Mature: 690

Protein sequence:

>690_residues
MWRRFIYHPEVNYALRQTLVLCLPVLFGLMVGQLQQGLLFSLVPVCCNIAGLDTPHKRFFKRLAVGGTLFALGSLLLQMA
LLWSVPLPLAMLLLALLFGVNGEISPLHARLLPATLVAAIFTLSIVGMVPIWQGPLLYLVGTIWYGAFTWFWFVLWKGQP
IRETLNQLYLELADYIEAKYSLLTQHSDPQTALPPLLNRQQKVMDLISVIYQQMHMLSLVHNPEYKRLVRYFQVALDLQE
HITVSLSQPEEVQTLVAQSQAEAIIRRNAQVVAGRLRVLADDIQYHRYPQHFSMRSEVSALEKLASRYPDNPVGQFCLHH
FSRMGRLLERQRPLYQRQLMATQQRLPFWPALRAYCSLKSGALRNALRLGLTLTAGSGLGILLALPKPYWIMLTTMLVIQ
NGYNATRVRIQHRAMGTFAGLIIAAGLLQLTLSEYAMLLVMLLVTLGAYLALRKNYGLAVIGFTVSAVFTLQLLALNGSH
FLVPRLVDTLLGCILAFASTIWLWPQWQSGLLRKNAHQALEAYQDELRLLLSAEPGVSELAYARMRSNQAQNTLYSSLSQ
AMQEPGFDSRYLADMRLWISHSQFIVEHLNAMTILAREHYMLTPRLAQDYLQCGEIALQLCQQRLEHDGPSSNDSQAVPI
PEPQQGMPMTPMEVHLRRILSHLRTMHTISSIAWRQRPHHGLWLSRRLRD

Sequences:

>Translated_690_residues
MWRRFIYHPEVNYALRQTLVLCLPVLFGLMVGQLQQGLLFSLVPVCCNIAGLDTPHKRFFKRLAVGGTLFALGSLLLQMA
LLWSVPLPLAMLLLALLFGVNGEISPLHARLLPATLVAAIFTLSIVGMVPIWQGPLLYLVGTIWYGAFTWFWFVLWKGQP
IRETLNQLYLELADYIEAKYSLLTQHSDPQTALPPLLNRQQKVMDLISVIYQQMHMLSLVHNPEYKRLVRYFQVALDLQE
HITVSLSQPEEVQTLVAQSQAEAIIRRNAQVVAGRLRVLADDIQYHRYPQHFSMRSEVSALEKLASRYPDNPVGQFCLHH
FSRMGRLLERQRPLYQRQLMATQQRLPFWPALRAYCSLKSGALRNALRLGLTLTAGSGLGILLALPKPYWIMLTTMLVIQ
NGYNATRVRIQHRAMGTFAGLIIAAGLLQLTLSEYAMLLVMLLVTLGAYLALRKNYGLAVIGFTVSAVFTLQLLALNGSH
FLVPRLVDTLLGCILAFASTIWLWPQWQSGLLRKNAHQALEAYQDELRLLLSAEPGVSELAYARMRSNQAQNTLYSSLSQ
AMQEPGFDSRYLADMRLWISHSQFIVEHLNAMTILAREHYMLTPRLAQDYLQCGEIALQLCQQRLEHDGPSSNDSQAVPI
PEPQQGMPMTPMEVHLRRILSHLRTMHTISSIAWRQRPHHGLWLSRRLRD
>Mature_690_residues
MWRRFIYHPEVNYALRQTLVLCLPVLFGLMVGQLQQGLLFSLVPVCCNIAGLDTPHKRFFKRLAVGGTLFALGSLLLQMA
LLWSVPLPLAMLLLALLFGVNGEISPLHARLLPATLVAAIFTLSIVGMVPIWQGPLLYLVGTIWYGAFTWFWFVLWKGQP
IRETLNQLYLELADYIEAKYSLLTQHSDPQTALPPLLNRQQKVMDLISVIYQQMHMLSLVHNPEYKRLVRYFQVALDLQE
HITVSLSQPEEVQTLVAQSQAEAIIRRNAQVVAGRLRVLADDIQYHRYPQHFSMRSEVSALEKLASRYPDNPVGQFCLHH
FSRMGRLLERQRPLYQRQLMATQQRLPFWPALRAYCSLKSGALRNALRLGLTLTAGSGLGILLALPKPYWIMLTTMLVIQ
NGYNATRVRIQHRAMGTFAGLIIAAGLLQLTLSEYAMLLVMLLVTLGAYLALRKNYGLAVIGFTVSAVFTLQLLALNGSH
FLVPRLVDTLLGCILAFASTIWLWPQWQSGLLRKNAHQALEAYQDELRLLLSAEPGVSELAYARMRSNQAQNTLYSSLSQ
AMQEPGFDSRYLADMRLWISHSQFIVEHLNAMTILAREHYMLTPRLAQDYLQCGEIALQLCQQRLEHDGPSSNDSQAVPI
PEPQQGMPMTPMEVHLRRILSHLRTMHTISSIAWRQRPHHGLWLSRRLRD

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yccS/yhfK family [H]

Homologues:

Organism=Escherichia coli, GI87082248, Length=694, Percent_Identity=63.8328530259366, Blast_Score=893, Evalue=0.0,
Organism=Escherichia coli, GI87081808, Length=599, Percent_Identity=23.873121869783, Blast_Score=118, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006726
- InterPro:   IPR010020 [H]

Pfam domain/function: PF04632 FUSC [H]

EC number: NA

Molecular weight: Translated: 78445; Mature: 78445

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHCCCCCCCHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]