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The map label for this gene is smf [H]

Identifier: 238921408

GI number: 238921408

Start: 3460927

End: 3462039

Strand: Reverse

Name: smf [H]

Synonym: NT01EI_3559

Alternate gene names: 238921408

Gene position: 3462039-3460927 (Counterclockwise)

Preceding gene: 238921416

Following gene: 238921407

Centisome position: 90.81

GC content: 64.06

Gene sequence:

>1113_bases
ATGGAGGGTCTCGAAATCTGGCTGCGTCTCGCGCAGGTTCGCGGGCTGGGGGCGCCCCGCATTGTTAACGCGGCGCGGAT
ATTGGCGCAGCAGGGCGTATCGGCACAGGGGATGGCGTCCGGCGGGCTGACCTCTGCACAGCAGCGGCAGTTTCATGGCG
CCACGGGTATCGTTGAGGCGATGGCGTGGTTGGATGGCGGTCGAGGGGTGATGCTGACACTGGCCGACAGTACCTACCCC
GATCGCCTGCGCCAGATCGCTGGCGCCCCTGCGCTGCTGTTTGTTTGTGGCGATCCCCGCCTGCTGTCAACGGCGGCGCT
GGCCATTGTCGGCAGTCGTGCGCCCAGCCGCTATGGCGATAGTCAGGCGCAGTTTTTTGCCCGCGTGCTGGCGGCGAGCG
GATTGACGATCGTCAGCGGCCTCGCGCTGGGGATCGACGGGCTGGCGCACCGCGGCGCACTGTCGGCGCAGGGAAAGACC
ATCGCGGTGCTGGGCAGTGGGCCGGACTGCGTGGCGCCGCGGACGCACCGCTGGCTGGCGCAGGCCATTCTAGAGGCGGA
CGGCGCGCTGGTGTCCGAGTTTTTTCCAGGGACAGAGGCACGCCCCGCCTATTTCCCGCAGCGTAACCGTATCATCAGTG
GGTTGAGTCTGGGGGTGCTGGTGGTCGAGGCGACGCTGCGCAGCGGCTCGTTGATCACGGCGCGGCTGGCATTGGATCAG
GGGCGGGAGGTGTTCGCCATTCCCGGCTCGCTAGACAGCCCGCAGAGTGCAGGGTGCCATTGGCTGATCCAGCAGGGCGC
GTCTCTTATTGCGGCGCCGGCGGATATCCTTGAGCAGCTGAACAGCTCGCTGCATTGGTTGGCACCGCTCACAGAAGGGA
ATATTTCTGCCGGTGAAGACGATGCTCAATTGCCATTTGCCGAGGTGTTGGCTAACGTAGGGGATGAGGTGACAACCGTT
GACGCTGTCGCCGAACGCATCGGTCGATCTGTGCCAGACGTAGCAGTAGCCCTGCTCGAACTGGAGTTAGCAGGATGGAT
TAAGGTAGTGTCCGGCGGCTATGTCCGTGTGAAGAGGGCTGGCCATGTTCGATGTACTCATGTATCTGTTTGA

Upstream 100 bases:

>100_bases
AGCTAGGGAATGATTTTCACTCCTATTCTAGACAGTTCTCCCCCTGATTGACAGTATTGTTCACCTATTGAACACATCGG
CCGATAGCCGCGGGAGCGCA

Downstream 100 bases:

>100_bases
GACCTATATCCACACGACGGCCGGGATGCACATCGATCAGGATAAGCTAACTGACGATTTGACCAGCGCGGGCTTTGAAC
GTGGGGATATCTTTCGGGCG

Product: protein smf

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MEGLEIWLRLAQVRGLGAPRIVNAARILAQQGVSAQGMASGGLTSAQQRQFHGATGIVEAMAWLDGGRGVMLTLADSTYP
DRLRQIAGAPALLFVCGDPRLLSTAALAIVGSRAPSRYGDSQAQFFARVLAASGLTIVSGLALGIDGLAHRGALSAQGKT
IAVLGSGPDCVAPRTHRWLAQAILEADGALVSEFFPGTEARPAYFPQRNRIISGLSLGVLVVEATLRSGSLITARLALDQ
GREVFAIPGSLDSPQSAGCHWLIQQGASLIAAPADILEQLNSSLHWLAPLTEGNISAGEDDAQLPFAEVLANVGDEVTTV
DAVAERIGRSVPDVAVALLELELAGWIKVVSGGYVRVKRAGHVRCTHVSV

Sequences:

>Translated_370_residues
MEGLEIWLRLAQVRGLGAPRIVNAARILAQQGVSAQGMASGGLTSAQQRQFHGATGIVEAMAWLDGGRGVMLTLADSTYP
DRLRQIAGAPALLFVCGDPRLLSTAALAIVGSRAPSRYGDSQAQFFARVLAASGLTIVSGLALGIDGLAHRGALSAQGKT
IAVLGSGPDCVAPRTHRWLAQAILEADGALVSEFFPGTEARPAYFPQRNRIISGLSLGVLVVEATLRSGSLITARLALDQ
GREVFAIPGSLDSPQSAGCHWLIQQGASLIAAPADILEQLNSSLHWLAPLTEGNISAGEDDAQLPFAEVLANVGDEVTTV
DAVAERIGRSVPDVAVALLELELAGWIKVVSGGYVRVKRAGHVRCTHVSV
>Mature_370_residues
MEGLEIWLRLAQVRGLGAPRIVNAARILAQQGVSAQGMASGGLTSAQQRQFHGATGIVEAMAWLDGGRGVMLTLADSTYP
DRLRQIAGAPALLFVCGDPRLLSTAALAIVGSRAPSRYGDSQAQFFARVLAASGLTIVSGLALGIDGLAHRGALSAQGKT
IAVLGSGPDCVAPRTHRWLAQAILEADGALVSEFFPGTEARPAYFPQRNRIISGLSLGVLVVEATLRSGSLITARLALDQ
GREVFAIPGSLDSPQSAGCHWLIQQGASLIAAPADILEQLNSSLHWLAPLTEGNISAGEDDAQLPFAEVLANVGDEVTTV
DAVAERIGRSVPDVAVALLELELAGWIKVVSGGYVRVKRAGHVRCTHVSV

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=374, Percent_Identity=50, Blast_Score=323, Evalue=1e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 38580; Mature: 38580

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGLEIWLRLAQVRGLGAPRIVNAARILAQQGVSAQGMASGGLTSAQQRQFHGATGIVEA
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHHH
MAWLDGGRGVMLTLADSTYPDRLRQIAGAPALLFVCGDPRLLSTAALAIVGSRAPSRYGD
HHHHCCCCEEEEEEECCCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCC
SQAQFFARVLAASGLTIVSGLALGIDGLAHRGALSAQGKTIAVLGSGPDCVAPRTHRWLA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHH
QAILEADGALVSEFFPGTEARPAYFPQRNRIISGLSLGVLVVEATLRSGSLITARLALDQ
HHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHCCHHHHHEEEEHHCCCCEEEEEEECCC
GREVFAIPGSLDSPQSAGCHWLIQQGASLIAAPADILEQLNSSLHWLAPLTEGNISAGED
CCEEEECCCCCCCCCCCCHHHHHHCCCCEEECCHHHHHHHCCCEEEEEECCCCCCCCCCC
DAQLPFAEVLANVGDEVTTVDAVAERIGRSVPDVAVALLELELAGWIKVVSGGYVRVKRA
CCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
GHVRCTHVSV
CCEEEEEECC
>Mature Secondary Structure
MEGLEIWLRLAQVRGLGAPRIVNAARILAQQGVSAQGMASGGLTSAQQRQFHGATGIVEA
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHHH
MAWLDGGRGVMLTLADSTYPDRLRQIAGAPALLFVCGDPRLLSTAALAIVGSRAPSRYGD
HHHHCCCCEEEEEEECCCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCC
SQAQFFARVLAASGLTIVSGLALGIDGLAHRGALSAQGKTIAVLGSGPDCVAPRTHRWLA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHH
QAILEADGALVSEFFPGTEARPAYFPQRNRIISGLSLGVLVVEATLRSGSLITARLALDQ
HHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHCCHHHHHEEEEHHCCCCEEEEEEECCC
GREVFAIPGSLDSPQSAGCHWLIQQGASLIAAPADILEQLNSSLHWLAPLTEGNISAGED
CCEEEECCCCCCCCCCCCHHHHHHCCCCEEECCHHHHHHHCCCEEEEEECCCCCCCCCCC
DAQLPFAEVLANVGDEVTTVDAVAERIGRSVPDVAVALLELELAGWIKVVSGGYVRVKRA
CCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
GHVRCTHVSV
CCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8432722; 8112305; 9278503 [H]