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The map label for this gene is ygfM [H]

Identifier: 238921378

GI number: 238921378

Start: 3418356

End: 3419135

Strand: Reverse

Name: ygfM [H]

Synonym: NT01EI_3522

Alternate gene names: 238921378

Gene position: 3419135-3418356 (Counterclockwise)

Preceding gene: 238921379

Following gene: 238921377

Centisome position: 89.69

GC content: 65.0

Gene sequence:

>780_bases
ATGATTGAGCAATTTTTCCGGCCGGACTCCGTAGAGCAGGCGTTGGAGCTTAAGCGTCGCTTTCAGGATCGGGCTGTTTA
CTTCGCCGGAGGAAGTAAATTAAACGCCACGCCCACGCGCACCGAGAAGACGGTGGCTATCTCCCTGAAAGGGCTAGGTT
TGGATCGGGTTACCTGGCATGGCGGCGCGTTGCACCTCGGCGCTCTGACAACGCTGCAGCAGCTGCGCGATACGGCGCGG
CTGCCCCAGGCGCTGCAGGATGCACTGGGCTTTATCTATTCACGCCATCTGCGCAACCAGTCTACGTTGGGCGGCGAGCT
GGCGGCCTGCCAGGCCGAATCGGTACTGACGCCGGTGCTGTTGGCGTTGGATGCCCGTCTGCAGAGTGCCGACGGCGCGG
TGATCGCGCTGGAGGATTACCTGGCTGCCCCGGATGATCGTCTGTTAACGGCGGTGATCATCGACGATCCCTTGCGCTGC
TGCGCTACCCGTAAGGTGAGCCGTTCGGCGGCGGGCTGGTCGGTGGTGACGGCGGCCGTCGCGCTTCCGGGCGATGGGGG
CCGACGTATCGCCCTGGACGGCGTCGCCTCTCGGCCGCAGCGTCTGCGCGACGTGGAGGGGCTGGCCCTGGAGGGCGAGC
CGCTGGCACAGGCGGTTGGTGCCGCGATCGCGCCGGGCGCGGATCTGGGTGGCAGCGAAGCGTATAAGCGCTATATCGCG
GGCGTAGTGGTGGCTGAACTGTTGGCGGACTGCCAGCAGATGAGGGAGGAAGCAAAATGA

Upstream 100 bases:

>100_bases
GGGTCGCCGCCAAGATGTGGCAGCGTATGGATGCACTGAACTGAGACCATAAAACCGCGCGGGCTTTGGCCCGTGCGGTT
TTACACAAAGAGGGTGGAAC

Downstream 100 bases:

>100_bases
CAATTCGCTTTACGCTGAACGGCACCCCGCGCACGCTGGCGTGTCAGCCGGGCGACAATGTACAGCAGCTCTTGTTTGGA
CTTGGCATGCACTCTGTCCG

Product: selenate reductase subunit YgfM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MIEQFFRPDSVEQALELKRRFQDRAVYFAGGSKLNATPTRTEKTVAISLKGLGLDRVTWHGGALHLGALTTLQQLRDTAR
LPQALQDALGFIYSRHLRNQSTLGGELAACQAESVLTPVLLALDARLQSADGAVIALEDYLAAPDDRLLTAVIIDDPLRC
CATRKVSRSAAGWSVVTAAVALPGDGGRRIALDGVASRPQRLRDVEGLALEGEPLAQAVGAAIAPGADLGGSEAYKRYIA
GVVVAELLADCQQMREEAK

Sequences:

>Translated_259_residues
MIEQFFRPDSVEQALELKRRFQDRAVYFAGGSKLNATPTRTEKTVAISLKGLGLDRVTWHGGALHLGALTTLQQLRDTAR
LPQALQDALGFIYSRHLRNQSTLGGELAACQAESVLTPVLLALDARLQSADGAVIALEDYLAAPDDRLLTAVIIDDPLRC
CATRKVSRSAAGWSVVTAAVALPGDGGRRIALDGVASRPQRLRDVEGLALEGEPLAQAVGAAIAPGADLGGSEAYKRYIA
GVVVAELLADCQQMREEAK
>Mature_259_residues
MIEQFFRPDSVEQALELKRRFQDRAVYFAGGSKLNATPTRTEKTVAISLKGLGLDRVTWHGGALHLGALTTLQQLRDTAR
LPQALQDALGFIYSRHLRNQSTLGGELAACQAESVLTPVLLALDARLQSADGAVIALEDYLAAPDDRLLTAVIIDDPLRC
CATRKVSRSAAGWSVVTAAVALPGDGGRRIALDGVASRPQRLRDVEGLALEGEPLAQAVGAAIAPGADLGGSEAYKRYIA
GVVVAELLADCQQMREEAK

Specific function: Unknown

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Escherichia coli, GI1789245, Length=258, Percent_Identity=67.8294573643411, Blast_Score=340, Evalue=7e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR002346
- InterPro:   IPR017698 [H]

Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]

EC number: NA

Molecular weight: Translated: 27582; Mature: 27582

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEQFFRPDSVEQALELKRRFQDRAVYFAGGSKLNATPTRTEKTVAISLKGLGLDRVTWH
CCCCCCCCCHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEC
GGALHLGALTTLQQLRDTARLPQALQDALGFIYSRHLRNQSTLGGELAACQAESVLTPVL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LALDARLQSADGAVIALEDYLAAPDDRLLTAVIIDDPLRCCATRKVSRSAAGWSVVTAAV
HHHHHHHHCCCCCEEEEHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHE
ALPGDGGRRIALDGVASRPQRLRDVEGLALEGEPLAQAVGAAIAPGADLGGSEAYKRYIA
ECCCCCCCEEEECCCCCCHHHHHHCCCCEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHH
GVVVAELLADCQQMREEAK
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIEQFFRPDSVEQALELKRRFQDRAVYFAGGSKLNATPTRTEKTVAISLKGLGLDRVTWH
CCCCCCCCCHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEC
GGALHLGALTTLQQLRDTARLPQALQDALGFIYSRHLRNQSTLGGELAACQAESVLTPVL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LALDARLQSADGAVIALEDYLAAPDDRLLTAVIIDDPLRCCATRKVSRSAAGWSVVTAAV
HHHHHHHHCCCCCEEEEHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHE
ALPGDGGRRIALDGVASRPQRLRDVEGLALEGEPLAQAVGAAIAPGADLGGSEAYKRYIA
ECCCCCCCEEEECCCCCCHHHHHHCCCCEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHH
GVVVAELLADCQQMREEAK
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]