Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is guaD [H]
Identifier: 238921375
GI number: 238921375
Start: 3412518
End: 3413834
Strand: Reverse
Name: guaD [H]
Synonym: NT01EI_3519
Alternate gene names: 238921375
Gene position: 3413834-3412518 (Counterclockwise)
Preceding gene: 238921376
Following gene: 238921374
Centisome position: 89.55
GC content: 58.01
Gene sequence:
>1317_bases ATGGTTTGTGAACATACCCTCAAGGCAGTCCGCGGTAGCATTCTGGATGTCACCCGTACGGTGACCGATCCGCAACAGGT TGAATCTGCACTGCGTTTTATTGAGGACGGTCTGTTATTGATCCGCAATGGGAAAGTGGACTGGTGCGGCAGCTGGGAAG AGGGGCGGGGGCGCATTCCCGCATCGATTCGGGTGCGGGACTACCGCGGCAAGCTGATCGTCCCCGGCTTTGTCGATACC CATATTCACTATCCGCAGAGCGAGATGGTCGGGGCCTATGGCGAACAGCTGTTGGAGTGGTTGAACAAGCACACCTTTCC CACCGAGCAGCGCTATAACGATCTCGATTACGCCCGCGAAATGTCTAACTTTTTCCTTAAACAGCTGCTGCGTAACGGCA CCACCACCGCCCTGGTGTTCGGCACCGTGCATCCGGAGTCGGTGGATGCGCTGTTTGAGGCTGCCAGCCATATCAACATG CGGATGATCGCCGGCAAGGTAATGATGGATCGCAATGCGCCGGACTATCTGTTGGACGATGCGCAGAGCAGCTACGAACA GAGCAAGGCACTGATCGAGCGCTGGCACAAGAATGGCCGCCTGCTGTATGCGGTGACCCCGCGCTTTGCACCGACCTCCA GTCCGGAGCAGCTGGCGATGGCCCAGCGCCTGCGCGAAGAGTATCCCGACACCTATTTGCATACCCATCTGTGTGAAAAC CGCGACGAGATCGCCTGGGTCAAGTCGCTGTACCCGCACCATGACGGCTATCTGGATGTGTATCACCAGTATGGCCTGAC CGGGAAGAACTGCGTGTTCGCCCACTGTATCCACCTGGAGGAGAAAGAGTGGGACTGCCTGAGCGATACCGGTTCTTCGA TCGCCTTCTGCCCGACCTCTAACCTGTACCTCGGCAGCGGCCTGTTTAACCTGCAACAGGCCTGGCGCAAGCGGGTGAAG GTGGGGATGGGAACCGACATCGGCGCCGGGACCACCTTTAACATGCTGCAGACGCTGAATGAGGCTTACAAGGTGATGCA GCTGCAGGGCTGCCGCTTGTCCGCCTATGAGGCGTTCTACCTGGCAACCCTGGGCGGCGCGGCCTCTCTGGGGCTGGACG ATCGCATCGGTAACTTCCTGGTCGGTAAAGAGGCCGACTTTGTGGTTCTGGAGCCGACGGCGACGCCGCTGCAACAGCTG CGTTATGACAACTCGGTCTCTTTGGTGGATAAGCTGTTTGTCACCATGACACTGGGCGATGATCGCACCATATATCGTAC CTATGTCGATGGTCGTTTAGTGTACGAACGCACCTAA
Upstream 100 bases:
>100_bases GAAAGCGGAGGTCCGTCGGGAAGAGGATGAACCGACAGGCACATTGTCTGCAGAAGAAGAGATGGACTGAGTCGATGTCT TGGCTGATTAGGAGTTAATC
Downstream 100 bases:
>100_bases AATGTCGCGTTTGTGGGTTGAAATGACGAGGTATTAGGCCAGATAATCGTTTGCCTTTTGCTTCTGTCCCATTTTTACCC GAATTTGGTTACAGGATGTA
Product: guanine deaminase
Products: NA
Alternate protein names: Guanase; Guanine aminase; Guanine aminohydrolase; GAH [H]
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MVCEHTLKAVRGSILDVTRTVTDPQQVESALRFIEDGLLLIRNGKVDWCGSWEEGRGRIPASIRVRDYRGKLIVPGFVDT HIHYPQSEMVGAYGEQLLEWLNKHTFPTEQRYNDLDYAREMSNFFLKQLLRNGTTTALVFGTVHPESVDALFEAASHINM RMIAGKVMMDRNAPDYLLDDAQSSYEQSKALIERWHKNGRLLYAVTPRFAPTSSPEQLAMAQRLREEYPDTYLHTHLCEN RDEIAWVKSLYPHHDGYLDVYHQYGLTGKNCVFAHCIHLEEKEWDCLSDTGSSIAFCPTSNLYLGSGLFNLQQAWRKRVK VGMGTDIGAGTTFNMLQTLNEAYKVMQLQGCRLSAYEAFYLATLGGAASLGLDDRIGNFLVGKEADFVVLEPTATPLQQL RYDNSVSLVDKLFVTMTLGDDRTIYRTYVDGRLVYERT
Sequences:
>Translated_438_residues MVCEHTLKAVRGSILDVTRTVTDPQQVESALRFIEDGLLLIRNGKVDWCGSWEEGRGRIPASIRVRDYRGKLIVPGFVDT HIHYPQSEMVGAYGEQLLEWLNKHTFPTEQRYNDLDYAREMSNFFLKQLLRNGTTTALVFGTVHPESVDALFEAASHINM RMIAGKVMMDRNAPDYLLDDAQSSYEQSKALIERWHKNGRLLYAVTPRFAPTSSPEQLAMAQRLREEYPDTYLHTHLCEN RDEIAWVKSLYPHHDGYLDVYHQYGLTGKNCVFAHCIHLEEKEWDCLSDTGSSIAFCPTSNLYLGSGLFNLQQAWRKRVK VGMGTDIGAGTTFNMLQTLNEAYKVMQLQGCRLSAYEAFYLATLGGAASLGLDDRIGNFLVGKEADFVVLEPTATPLQQL RYDNSVSLVDKLFVTMTLGDDRTIYRTYVDGRLVYERT >Mature_438_residues MVCEHTLKAVRGSILDVTRTVTDPQQVESALRFIEDGLLLIRNGKVDWCGSWEEGRGRIPASIRVRDYRGKLIVPGFVDT HIHYPQSEMVGAYGEQLLEWLNKHTFPTEQRYNDLDYAREMSNFFLKQLLRNGTTTALVFGTVHPESVDALFEAASHINM RMIAGKVMMDRNAPDYLLDDAQSSYEQSKALIERWHKNGRLLYAVTPRFAPTSSPEQLAMAQRLREEYPDTYLHTHLCEN RDEIAWVKSLYPHHDGYLDVYHQYGLTGKNCVFAHCIHLEEKEWDCLSDTGSSIAFCPTSNLYLGSGLFNLQQAWRKRVK VGMGTDIGAGTTFNMLQTLNEAYKVMQLQGCRLSAYEAFYLATLGGAASLGLDDRIGNFLVGKEADFVVLEPTATPLQQL RYDNSVSLVDKLFVTMTLGDDRTIYRTYVDGRLVYERT
Specific function: Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATZ/TRZ family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=405, Percent_Identity=36.2962962962963, Blast_Score=237, Evalue=1e-62, Organism=Escherichia coli, GI1789249, Length=437, Percent_Identity=87.4141876430206, Blast_Score=816, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6319963, Length=418, Percent_Identity=33.0143540669856, Blast_Score=222, Evalue=8e-59, Organism=Drosophila melanogaster, GI24643849, Length=446, Percent_Identity=31.6143497757848, Blast_Score=207, Evalue=2e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR014311 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.3 [H]
Molecular weight: Translated: 49801; Mature: 49801
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVCEHTLKAVRGSILDVTRTVTDPQQVESALRFIEDGLLLIRNGKVDWCGSWEEGRGRIP CCCHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCC ASIRVRDYRGKLIVPGFVDTHIHYPQSEMVGAYGEQLLEWLNKHTFPTEQRYNDLDYARE CEEEEEECCCCEEECCEECCCEECCHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHH MSNFFLKQLLRNGTTTALVFGTVHPESVDALFEAASHINMRMIAGKVMMDRNAPDYLLDD HHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEECCCEECCCCCCHHHHH AQSSYEQSKALIERWHKNGRLLYAVTPRFAPTSSPEQLAMAQRLREEYPDTYLHTHLCEN HHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCC RDEIAWVKSLYPHHDGYLDVYHQYGLTGKNCVFAHCIHLEEKEWDCLSDTGSSIAFCPTS CHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHCCCCEEEECCCC NLYLGSGLFNLQQAWRKRVKVGMGTDIGAGTTFNMLQTLNEAYKVMQLQGCRLSAYEAFY CEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LATLGGAASLGLDDRIGNFLVGKEADFVVLEPTATPLQQLRYDNSVSLVDKLFVTMTLGD EEECCCCCCCCCHHHCCCEEECCCCCEEEECCCCCHHHHHCCCCCHHHHHEEEEEEEECC DRTIYRTYVDGRLVYERT CCEEEEEEECCEEEEECC >Mature Secondary Structure MVCEHTLKAVRGSILDVTRTVTDPQQVESALRFIEDGLLLIRNGKVDWCGSWEEGRGRIP CCCHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCC ASIRVRDYRGKLIVPGFVDTHIHYPQSEMVGAYGEQLLEWLNKHTFPTEQRYNDLDYARE CEEEEEECCCCEEECCEECCCEECCHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHH MSNFFLKQLLRNGTTTALVFGTVHPESVDALFEAASHINMRMIAGKVMMDRNAPDYLLDD HHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEECCCEECCCCCCHHHHH AQSSYEQSKALIERWHKNGRLLYAVTPRFAPTSSPEQLAMAQRLREEYPDTYLHTHLCEN HHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCC RDEIAWVKSLYPHHDGYLDVYHQYGLTGKNCVFAHCIHLEEKEWDCLSDTGSSIAFCPTS CHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHCCCCEEEECCCC NLYLGSGLFNLQQAWRKRVKVGMGTDIGAGTTFNMLQTLNEAYKVMQLQGCRLSAYEAFY CEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LATLGGAASLGLDDRIGNFLVGKEADFVVLEPTATPLQQLRYDNSVSLVDKLFVTMTLGD EEECCCCCCCCCHHHCCCEEECCCCCEEEECCCCCHHHHHCCCCCHHHHHEEEEEEEECC DRTIYRTYVDGRLVYERT CCEEEEEEECCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 10913105 [H]