Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is yceF2 [H]
Identifier: 238921344
GI number: 238921344
Start: 3386180
End: 3386773
Strand: Reverse
Name: yceF2 [H]
Synonym: NT01EI_3488
Alternate gene names: 238921344
Gene position: 3386773-3386180 (Counterclockwise)
Preceding gene: 238921345
Following gene: 238921343
Centisome position: 88.84
GC content: 64.48
Gene sequence:
>594_bases ATGTGTGAAATCTATCTGGCCTCTGGCTCCCCGCGTCGGCGTGAACTGCTGACGCTGATGGCCATTCCCTTTGAGCGTTT AACGCTGAGTGTGGAGGAGCAGCGCCGTCCAAACGAGGCGCCGCTGGCGTATGTCTGTCGCCTGTCGCGCGACAAGGCGC AGGCCGGCGTGGTTGCCGCGGCGCAGGATCGTCCGGTGTTGGGGGCCGATACCATCGTGGTGCTCGACGGCGACGTGCTG GAAAAGCCGCAGGATCCGGCGCAGGCGGCATTGATGCTGCGGCGCCTGTCCGGGCGCAGCCATCAGGTGATCACGGCGCT GACTCTGGCCGATCGGCGGGACTGCCTCAGCTGCCATGTGGTGACCGACGTGACCTTCTGTACCCTGAGCGAGGCGCAGA TCGCCGACTATGTGGCCAGCGGCGAGCCGCTGGATAAGGCCGGTGCCTACGGCATTCAGGGTCAGGGGGGCTGTTTCGTC CGCGCGATCAACGGCAGTTATCATGCGGTGATGGGACTGCCGCTGGCGGAGACCCGCGAGCTGCTGGCACGCTTTATGGC GTTAAGGGATGAGAGGAGAGATCATGACAACTGA
Upstream 100 bases:
>100_bases CTATGGCCGTGGCTGTTCCTGCTGATGCGTAAGGTCCGCCGCCAGTTTGCCGTGCAGTGACGGTGTGCGGCGGTGCTGAA TACAGGGTTATCGAAAGCGT
Downstream 100 bases:
>100_bases ACTGTTGGTTAACATTACCCCATCGGAAACGCGCGTAGCTTATATCGATGGTGGTATCCTGCAGGAGATCCATATTGAGC GGGAGTCCAAGCGGGGCATC
Product: septum formation protein Maf
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MCEIYLASGSPRRRELLTLMAIPFERLTLSVEEQRRPNEAPLAYVCRLSRDKAQAGVVAAAQDRPVLGADTIVVLDGDVL EKPQDPAQAALMLRRLSGRSHQVITALTLADRRDCLSCHVVTDVTFCTLSEAQIADYVASGEPLDKAGAYGIQGQGGCFV RAINGSYHAVMGLPLAETRELLARFMALRDERRDHDN
Sequences:
>Translated_197_residues MCEIYLASGSPRRRELLTLMAIPFERLTLSVEEQRRPNEAPLAYVCRLSRDKAQAGVVAAAQDRPVLGADTIVVLDGDVL EKPQDPAQAALMLRRLSGRSHQVITALTLADRRDCLSCHVVTDVTFCTLSEAQIADYVASGEPLDKAGAYGIQGQGGCFV RAINGSYHAVMGLPLAETRELLARFMALRDERRDHDN >Mature_197_residues MCEIYLASGSPRRRELLTLMAIPFERLTLSVEEQRRPNEAPLAYVCRLSRDKAQAGVVAAAQDRPVLGADTIVVLDGDVL EKPQDPAQAALMLRRLSGRSHQVITALTLADRRDCLSCHVVTDVTFCTLSEAQIADYVASGEPLDKAGAYGIQGQGGCFV RAINGSYHAVMGLPLAETRELLARFMALRDERRDHDN
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family [H]
Homologues:
Organism=Homo sapiens, GI117553627, Length=187, Percent_Identity=37.9679144385027, Blast_Score=110, Evalue=8e-25, Organism=Homo sapiens, GI291045181, Length=118, Percent_Identity=45.7627118644068, Blast_Score=98, Evalue=5e-21, Organism=Homo sapiens, GI310133124, Length=118, Percent_Identity=45.7627118644068, Blast_Score=98, Evalue=6e-21, Organism=Homo sapiens, GI291045183, Length=182, Percent_Identity=35.7142857142857, Blast_Score=97, Evalue=1e-20, Organism=Escherichia coli, GI1789646, Length=197, Percent_Identity=64.4670050761421, Blast_Score=263, Evalue=8e-72, Organism=Escherichia coli, GI87081830, Length=190, Percent_Identity=35.2631578947368, Blast_Score=92, Evalue=2e-20, Organism=Caenorhabditis elegans, GI193202443, Length=179, Percent_Identity=32.9608938547486, Blast_Score=88, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6324685, Length=202, Percent_Identity=31.1881188118812, Blast_Score=74, Evalue=1e-14, Organism=Drosophila melanogaster, GI78706856, Length=179, Percent_Identity=37.9888268156425, Blast_Score=110, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003697 [H]
Pfam domain/function: PF02545 Maf [H]
EC number: NA
Molecular weight: Translated: 21579; Mature: 21579
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCEIYLASGSPRRRELLTLMAIPFERLTLSVEEQRRPNEAPLAYVCRLSRDKAQAGVVAA CEEEEECCCCCHHHHHHHHHHCCHHHEEEEEHHHCCCCCCCCHHEECCCCCCHHCCEEEE AQDRPVLGADTIVVLDGDVLEKPQDPAQAALMLRRLSGRSHQVITALTLADRRDCLSCHV CCCCCCCCCCEEEEEECHHHCCCCCHHHHHHHHHHHCCCCCEEEEEEEHHCCCCCEEEEE VTDVTFCTLSEAQIADYVASGEPLDKAGAYGIQGQGGCFVRAINGSYHAVMGLPLAETRE EECEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCHHHHHH LLARFMALRDERRDHDN HHHHHHHHHHHHCCCCC >Mature Secondary Structure MCEIYLASGSPRRRELLTLMAIPFERLTLSVEEQRRPNEAPLAYVCRLSRDKAQAGVVAA CEEEEECCCCCHHHHHHHHHHCCHHHEEEEEHHHCCCCCCCCHHEECCCCCCHHCCEEEE AQDRPVLGADTIVVLDGDVLEKPQDPAQAALMLRRLSGRSHQVITALTLADRRDCLSCHV CCCCCCCCCCEEEEEECHHHCCCCCHHHHHHHHHHHCCCCCEEEEEEEHHCCCCCEEEEE VTDVTFCTLSEAQIADYVASGEPLDKAGAYGIQGQGGCFVRAINGSYHAVMGLPLAETRE EECEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCHHHHHH LLARFMALRDERRDHDN HHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA