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The map label for this gene is rng [H]

Identifier: 238921343

GI number: 238921343

Start: 3384721

End: 3386190

Strand: Reverse

Name: rng [H]

Synonym: NT01EI_3487

Alternate gene names: 238921343

Gene position: 3386190-3384721 (Counterclockwise)

Preceding gene: 238921344

Following gene: 238921342

Centisome position: 88.82

GC content: 58.78

Gene sequence:

>1470_bases
ATGACAACTGAACTGTTGGTTAACATTACCCCATCGGAAACGCGCGTAGCTTATATCGATGGTGGTATCCTGCAGGAGAT
CCATATTGAGCGGGAGTCCAAGCGGGGCATCGTTGGCAATATATACAAAGGGCGCGTGAGCCGGGTTCTGCCTGGAATGC
AGGCGGCCTTTGTAGATATTGGTCTGGAGAAGGCGGCGTTTCTGCACGCCTCCGACATTATGCCGCACACTGAATGCGTT
GCCGGTGATGAGCAGAAGAACTTTCACGTGCGTGATATCGCCGAGCTGGTGCGTCAGGGGCAGGATCTGATGGTGCAGGT
GGTAAAGGATCCGCTGGGCACCAAGGGGGCGCGGCTGACCACCGATATTACCTTGCCGTCGCGCTATCTGGTATTCATGC
CGGGTGCCAGCCATGTCGGGGTATCGCAGCGCATCGACAGCGAGGCAGAGCGTGAGCGCCTGAAGGCGATCGTCGCCCCG
CACTGCGATGCGCTGGGCGGCTTTATTATCCGCACGGCGGCGGAGGGGATCGATGATGAGGAGCTGGCGCAGGATGCTGC
CTTTCTCAAGCGTCTGTGGATCAAGGTGATGGAGCGTAAGCGTCGCAATAAGACCAAGTGTATGCTGTACGGTGAGCTGG
CGCTGGCGCCGCGGGTGTTGCGCGACTTTGCCGGTGCCCCGCTGAATCGCATCCGGGTGGACTCGCGCCTGACCTACGAT
CTGCTGCAGGATTTCACCCGCGAATATATGCCGGAGATGACCCACTGCCTGGAGCTATACAGCGGTAAGCAGCCGATCTT
TGACATGTACGATGTGGAGAATGAGATCCAGCGGGCGCTGGAGCGCCGGGTGGAGCTGAAGTCGGGCGGCTATCTGATCA
TCGATCAGACCGAGGCGATGACCACCATCGACATTAACACCGGCGCCTTCGTCGGCCATCGCAACCTGGATGAGACCATC
TTCAATACCAACGTAGAGGCGACCCAGGCCATTGCCCGCCAGCTGCGTCTGCGCAACCTGGGCGGCATCATCATCATCGA
CTTTATCGACATGAGCTGCGAGGATCACCGGCGGCGGGTGCTGCACTCGCTGGATCAGGCTCTCGGCAAGGATCGGGCGA
AAACCAGCATCAATGGCTTTTCGCAGCTAGGCTTGGTAGAGATGACCCGTAAGCGTACCCGTGAGAGCATCGAGCACGTA
CTGTGCGGTGAGTGTCCTACCTGCCACGGCCGCGGCACGGTAAAAACCGTGGAGACGGTCTGCTATGAGGTGCTGCGTGA
GATCGTGCGGGTGCACCATGCCTATGACAGCGATCGCTTTCTGGTGTATGCCTCTCCGGCGGTGGGTGAGGCGCTGAAGA
GCGAAGAGTCCCACGCACTGGCGGAGGTCGAGTTGTTTGTCGGCAAACAGGTTAAAGTACAGATTGAGCCGCTCTACAGT
CAGGAGCAGTTCGACGTGGTGATGATGTAA

Upstream 100 bases:

>100_bases
GCGATCAACGGCAGTTATCATGCGGTGATGGGACTGCCGCTGGCGGAGACCCGCGAGCTGCTGGCACGCTTTATGGCGTT
AAGGGATGAGAGGAGAGATC

Downstream 100 bases:

>100_bases
CGGCGTTGACGCCGGGGACGGGATCGATCCGCTGGGTTAGGTTTGAACGATAGGAGAACGGCGTGAGGCGACTGTCCGGT
TACCTGCTGGCAACGCTGGC

Product: ribonuclease G

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 489; Mature: 488

Protein sequence:

>489_residues
MTTELLVNITPSETRVAYIDGGILQEIHIERESKRGIVGNIYKGRVSRVLPGMQAAFVDIGLEKAAFLHASDIMPHTECV
AGDEQKNFHVRDIAELVRQGQDLMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGASHVGVSQRIDSEAERERLKAIVAP
HCDALGGFIIRTAAEGIDDEELAQDAAFLKRLWIKVMERKRRNKTKCMLYGELALAPRVLRDFAGAPLNRIRVDSRLTYD
LLQDFTREYMPEMTHCLELYSGKQPIFDMYDVENEIQRALERRVELKSGGYLIIDQTEAMTTIDINTGAFVGHRNLDETI
FNTNVEATQAIARQLRLRNLGGIIIIDFIDMSCEDHRRRVLHSLDQALGKDRAKTSINGFSQLGLVEMTRKRTRESIEHV
LCGECPTCHGRGTVKTVETVCYEVLREIVRVHHAYDSDRFLVYASPAVGEALKSEESHALAEVELFVGKQVKVQIEPLYS
QEQFDVVMM

Sequences:

>Translated_489_residues
MTTELLVNITPSETRVAYIDGGILQEIHIERESKRGIVGNIYKGRVSRVLPGMQAAFVDIGLEKAAFLHASDIMPHTECV
AGDEQKNFHVRDIAELVRQGQDLMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGASHVGVSQRIDSEAERERLKAIVAP
HCDALGGFIIRTAAEGIDDEELAQDAAFLKRLWIKVMERKRRNKTKCMLYGELALAPRVLRDFAGAPLNRIRVDSRLTYD
LLQDFTREYMPEMTHCLELYSGKQPIFDMYDVENEIQRALERRVELKSGGYLIIDQTEAMTTIDINTGAFVGHRNLDETI
FNTNVEATQAIARQLRLRNLGGIIIIDFIDMSCEDHRRRVLHSLDQALGKDRAKTSINGFSQLGLVEMTRKRTRESIEHV
LCGECPTCHGRGTVKTVETVCYEVLREIVRVHHAYDSDRFLVYASPAVGEALKSEESHALAEVELFVGKQVKVQIEPLYS
QEQFDVVMM
>Mature_488_residues
TTELLVNITPSETRVAYIDGGILQEIHIERESKRGIVGNIYKGRVSRVLPGMQAAFVDIGLEKAAFLHASDIMPHTECVA
GDEQKNFHVRDIAELVRQGQDLMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGASHVGVSQRIDSEAERERLKAIVAPH
CDALGGFIIRTAAEGIDDEELAQDAAFLKRLWIKVMERKRRNKTKCMLYGELALAPRVLRDFAGAPLNRIRVDSRLTYDL
LQDFTREYMPEMTHCLELYSGKQPIFDMYDVENEIQRALERRVELKSGGYLIIDQTEAMTTIDINTGAFVGHRNLDETIF
NTNVEATQAIARQLRLRNLGGIIIIDFIDMSCEDHRRRVLHSLDQALGKDRAKTSINGFSQLGLVEMTRKRTRESIEHVL
CGECPTCHGRGTVKTVETVCYEVLREIVRVHHAYDSDRFLVYASPAVGEALKSEESHALAEVELFVGKQVKVQIEPLYSQ
EQFDVVMM

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=489, Percent_Identity=86.2985685071575, Blast_Score=857, Evalue=0.0,
Organism=Escherichia coli, GI1787325, Length=428, Percent_Identity=36.9158878504673, Blast_Score=266, Evalue=2e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 55200; Mature: 55069

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTELLVNITPSETRVAYIDGGILQEIHIERESKRGIVGNIYKGRVSRVLPGMQAAFVDI
CCCEEEEEECCCCCEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHH
GLEKAAFLHASDIMPHTECVAGDEQKNFHVRDIAELVRQGQDLMVQVVKDPLGTKGARLT
CHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEE
TDITLPSRYLVFMPGASHVGVSQRIDSEAERERLKAIVAPHCDALGGFIIRTAAEGIDDE
EEEECCCCEEEEECCCCCCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH
ELAQDAAFLKRLWIKVMERKRRNKTKCMLYGELALAPRVLRDFAGAPLNRIRVDSRLTYD
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCCHHHEEECCHHHHH
LLQDFTREYMPEMTHCLELYSGKQPIFDMYDVENEIQRALERRVELKSGGYLIIDQTEAM
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCE
TTIDINTGAFVGHRNLDETIFNTNVEATQAIARQLRLRNLGGIIIIDFIDMSCEDHRRRV
EEEEECCCCEEECCCCCHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHH
LHSLDQALGKDRAKTSINGFSQLGLVEMTRKRTRESIEHVLCGECPTCHGRGTVKTVETV
HHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
CYEVLREIVRVHHAYDSDRFLVYASPAVGEALKSEESHALAEVELFVGKQVKVQIEPLYS
HHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHCCHHHHHHHHHEEECCEEEEEEEECCC
QEQFDVVMM
CCCCCEEEC
>Mature Secondary Structure 
TTELLVNITPSETRVAYIDGGILQEIHIERESKRGIVGNIYKGRVSRVLPGMQAAFVDI
CCEEEEEECCCCCEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHH
GLEKAAFLHASDIMPHTECVAGDEQKNFHVRDIAELVRQGQDLMVQVVKDPLGTKGARLT
CHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEE
TDITLPSRYLVFMPGASHVGVSQRIDSEAERERLKAIVAPHCDALGGFIIRTAAEGIDDE
EEEECCCCEEEEECCCCCCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH
ELAQDAAFLKRLWIKVMERKRRNKTKCMLYGELALAPRVLRDFAGAPLNRIRVDSRLTYD
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCCHHHEEECCHHHHH
LLQDFTREYMPEMTHCLELYSGKQPIFDMYDVENEIQRALERRVELKSGGYLIIDQTEAM
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCE
TTIDINTGAFVGHRNLDETIFNTNVEATQAIARQLRLRNLGGIIIIDFIDMSCEDHRRRV
EEEEECCCCEEECCCCCHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHH
LHSLDQALGKDRAKTSINGFSQLGLVEMTRKRTRESIEHVLCGECPTCHGRGTVKTVETV
HHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
CYEVLREIVRVHHAYDSDRFLVYASPAVGEALKSEESHALAEVELFVGKQVKVQIEPLYS
HHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHCCHHHHHHHHHEEECCEEEEEEEECCC
QEQFDVVMM
CCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]