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The map label for this gene is glpC [H]

Identifier: 238921320

GI number: 238921320

Start: 3356758

End: 3357957

Strand: Reverse

Name: glpC [H]

Synonym: NT01EI_3464

Alternate gene names: 238921320

Gene position: 3357957-3356758 (Counterclockwise)

Preceding gene: 238921321

Following gene: 238921319

Centisome position: 88.08

GC content: 61.0

Gene sequence:

>1200_bases
ATGAGCCTGCCTGCTGATAACAGCTTTGAACAATGTATCAAGTGCACCGTGTGCACCACCTATTGTCCGGTCGCCAAGGT
GAATCCGGCCTATCCCGGTCCGAAACAGGCGGGCCCGGACGGGGAGCGTCTGCGCCTGAAGGATCCGCAGCTGTACGATG
AGGCGCTGAAGTACTGCACCAACTGCAAGCGCTGTGAGGTGGCCTGCCCGTCCGATGTGAAGATCGGCGACATCATTCTG
CGTGCCAAGAATCAGTACGGTAACCATAAGCCCAGGCTGCGCGACGCCATCCTCAGCCATACCGATCTGATGGGCACCCT
CTCTACGCCGTTTGCGCCGTTGATCAACGCCACCACCGGCCTGAAGCCGGTGCGTCAGCTGCTGGATAAGGCGCTGAAGA
TCGACCACCGCCGCGAGCTGCCCAAGTACTCCCATGGCACCTTCCGCAGCTGGATGCGCAAGCAGAGCGCGGAGCAGGCG
CGCTTTAGCGAGCAGGTGGCGTTCTTTCACGGCTGCTACGTGAACTACAACCATCCGCAGCTGGGCAAGGATCTGGTGCG
GGTGTTTAACGCCATGGATATCGGGGTACAGCTGCTGTCGCGCGAGAAGTGCTGCGGCGTGCCGCTGGTGGCCAACGGCT
TTATCGATCAGGCCAGGAAACAGGCGCGGGTGAACGCCGACTCCCTGAGCGAGGCGGTGCTGGAGAAGGGGCTGCCGGTG
GTGGCGACCTCTTCAAGTTGCACCTTCATGCTGCGCGATGAATACCCGCACGTACTGGATATCGATACCACGCCGGTGCG
CGACCGGGTCGAGTTGGCGACCCGCCATCTTTACCGTCTGCTCGACGGCGGACGCACGCTGCCCCTAAAGCCGCTGAACC
TGAAGATCGCCTACCATACGCCGTGCCATATGGAGAGAATGGGCTGGGCGCCCTATACCCTGGCGCTGCTGCAGATGATC
CCGGGTGTAGAGCTTATCATTCTGGACTCCCAGTGCTGCGGCATCGCCGGTACCTACGGTTTCAAGAAAGAGAACTACGA
GACCGCACAGGGCATCGGCGCCGGATTGTTCCGTCAGATCGAAGCCAGTGGGGTGGATCTGGTGGTGACCGACTGTGAAA
CCTGTAAATGGCAGATCGAAATGTCCACCAGCAAGCGCTGCGAGCATCCGATCACCCTGCTGGCGCAGGCCTTGGCGTAG

Upstream 100 bases:

>100_bases
TGCTGGGCGGCTATGATCCGATCCATCAGGGCTGCGGCGCCGGGGTTTCCCTGCTCACCGCCCTGCACGCCGCGCAACAG
ATCCTGGCGGAGGACGCGTA

Downstream 100 bases:

>100_bases
TCTGTCGGTGGCGCTGCAGGCTGAGAAGGGTAACGCTGTATTATACTGTTTTCTATTGTTATTAATTCCTGTTTGAGTGA
GTGTCCCTGTTTGGTCCCGG

Product: sn-glycerol-3-phosphate dehydrogenase subunit C

Products: glycerone phosphate; reduced acceptor

Alternate protein names: G-3-P dehydrogenase [H]

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MSLPADNSFEQCIKCTVCTTYCPVAKVNPAYPGPKQAGPDGERLRLKDPQLYDEALKYCTNCKRCEVACPSDVKIGDIIL
RAKNQYGNHKPRLRDAILSHTDLMGTLSTPFAPLINATTGLKPVRQLLDKALKIDHRRELPKYSHGTFRSWMRKQSAEQA
RFSEQVAFFHGCYVNYNHPQLGKDLVRVFNAMDIGVQLLSREKCCGVPLVANGFIDQARKQARVNADSLSEAVLEKGLPV
VATSSSCTFMLRDEYPHVLDIDTTPVRDRVELATRHLYRLLDGGRTLPLKPLNLKIAYHTPCHMERMGWAPYTLALLQMI
PGVELIILDSQCCGIAGTYGFKKENYETAQGIGAGLFRQIEASGVDLVVTDCETCKWQIEMSTSKRCEHPITLLAQALA

Sequences:

>Translated_399_residues
MSLPADNSFEQCIKCTVCTTYCPVAKVNPAYPGPKQAGPDGERLRLKDPQLYDEALKYCTNCKRCEVACPSDVKIGDIIL
RAKNQYGNHKPRLRDAILSHTDLMGTLSTPFAPLINATTGLKPVRQLLDKALKIDHRRELPKYSHGTFRSWMRKQSAEQA
RFSEQVAFFHGCYVNYNHPQLGKDLVRVFNAMDIGVQLLSREKCCGVPLVANGFIDQARKQARVNADSLSEAVLEKGLPV
VATSSSCTFMLRDEYPHVLDIDTTPVRDRVELATRHLYRLLDGGRTLPLKPLNLKIAYHTPCHMERMGWAPYTLALLQMI
PGVELIILDSQCCGIAGTYGFKKENYETAQGIGAGLFRQIEASGVDLVVTDCETCKWQIEMSTSKRCEHPITLLAQALA
>Mature_398_residues
SLPADNSFEQCIKCTVCTTYCPVAKVNPAYPGPKQAGPDGERLRLKDPQLYDEALKYCTNCKRCEVACPSDVKIGDIILR
AKNQYGNHKPRLRDAILSHTDLMGTLSTPFAPLINATTGLKPVRQLLDKALKIDHRRELPKYSHGTFRSWMRKQSAEQAR
FSEQVAFFHGCYVNYNHPQLGKDLVRVFNAMDIGVQLLSREKCCGVPLVANGFIDQARKQARVNADSLSEAVLEKGLPVV
ATSSSCTFMLRDEYPHVLDIDTTPVRDRVELATRHLYRLLDGGRTLPLKPLNLKIAYHTPCHMERMGWAPYTLALLQMIP
GVELIILDSQCCGIAGTYGFKKENYETAQGIGAGLFRQIEASGVDLVVTDCETCKWQIEMSTSKRCEHPITLLAQALA

Specific function: Electron transfer protein; may also function as the membrane anchor for the glpAB dimer [H]

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein. Note=Loosely bound to the cytoplasmic membrane often occurring in vesicles associated with fumarate reductase [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788576, Length=394, Percent_Identity=75.6345177664975, Blast_Score=642, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR017753
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: 1.1.99.5

Molecular weight: Translated: 44532; Mature: 44401

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPADNSFEQCIKCTVCTTYCPVAKVNPAYPGPKQAGPDGERLRLKDPQLYDEALKYCT
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHC
NCKRCEVACPSDVKIGDIILRAKNQYGNHKPRLRDAILSHTDLMGTLSTPFAPLINATTG
CCCCEECCCCCCCCHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCC
LKPVRQLLDKALKIDHRRELPKYSHGTFRSWMRKQSAEQARFSEQVAFFHGCYVNYNHPQ
HHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCH
LGKDLVRVFNAMDIGVQLLSREKCCGVPLVANGFIDQARKQARVNADSLSEAVLEKGLPV
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCE
VATSSSCTFMLRDEYPHVLDIDTTPVRDRVELATRHLYRLLDGGRTLPLKPLNLKIAYHT
EEECCCCEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC
PCHMERMGWAPYTLALLQMIPGVELIILDSQCCGIAGTYGFKKENYETAQGIGAGLFRQI
CCHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
EASGVDLVVTDCETCKWQIEMSTSKRCEHPITLLAQALA
HCCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHC
>Mature Secondary Structure 
SLPADNSFEQCIKCTVCTTYCPVAKVNPAYPGPKQAGPDGERLRLKDPQLYDEALKYCT
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHC
NCKRCEVACPSDVKIGDIILRAKNQYGNHKPRLRDAILSHTDLMGTLSTPFAPLINATTG
CCCCEECCCCCCCCHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCC
LKPVRQLLDKALKIDHRRELPKYSHGTFRSWMRKQSAEQARFSEQVAFFHGCYVNYNHPQ
HHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCH
LGKDLVRVFNAMDIGVQLLSREKCCGVPLVANGFIDQARKQARVNADSLSEAVLEKGLPV
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCE
VATSSSCTFMLRDEYPHVLDIDTTPVRDRVELATRHLYRLLDGGRTLPLKPLNLKIAYHT
EEECCCCEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC
PCHMERMGWAPYTLALLQMIPGVELIILDSQCCGIAGTYGFKKENYETAQGIGAGLFRQI
CCHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
EASGVDLVVTDCETCKWQIEMSTSKRCEHPITLLAQALA
HCCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: sn-glycerol 3-phosphate; acceptor

Specific reaction: sn-glycerol 3-phosphate + acceptor = glycerone phosphate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]