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The map label for this gene is 238921304

Identifier: 238921304

GI number: 238921304

Start: 3338491

End: 3338814

Strand: Reverse

Name: 238921304

Synonym: NT01EI_3447

Alternate gene names: NA

Gene position: 3338814-3338491 (Counterclockwise)

Preceding gene: 238921305

Following gene: 238921303

Centisome position: 87.58

GC content: 47.84

Gene sequence:

>324_bases
ATGACTGCAAAAAGTAAATTCAAAAGTCCTGCATTTGAGGCCATCCATAGCGCGGCTTCTGGATTATTCAGCGTCGATGC
CATCCCACAGGAAACGATGCGCAACTTTGATAAAGCGTGCCTTAATAACGTGGACGATCTACAACCTATTGAAATTAAAG
CATTGCGCGAGAAGCTGAACGTCAGCCAACCCGTTTTTGCCAGCTACCTGAATACCAGTGTGTCAACGGTGCAGAAATGG
GAAAGTGGCGTAAAGCGCCCTAGTGGCTTGGCGCTGAAATTGCTTACTGTGGTGCGGAAGCATGGGTTGAAGGTGTTGGT
TTGA

Upstream 100 bases:

>100_bases
GAACTGGTCGGATTCCGCGAGTTAGCAAAGCACTACGCTGCCCTTGCTGATGAAAAGATTACGGCACTGATTAAGAGTAA
AGAACTGGTGGAGATTTGCC

Downstream 100 bases:

>100_bases
TTTCGAACTGCTAACAAAACCGAGTTGATGCGAATAACGTCAATCCCCACATAGCAGGCATGACACGAAAAATCATCAGT
AAGCAGCTCTGGAAATCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Cro/CI Family Transcriptional Regulator-Related Protein; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Transcriptional Regulator-Like Protein; Transcriptional Regulator-Like; Helix-Turn-Helix Family Protein; Helix-Turn-Helix Protein; Transcriptional Regulator Protein; HTH-Type Transcriptional Regulatory Protein

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MTAKSKFKSPAFEAIHSAASGLFSVDAIPQETMRNFDKACLNNVDDLQPIEIKALREKLNVSQPVFASYLNTSVSTVQKW
ESGVKRPSGLALKLLTVVRKHGLKVLV

Sequences:

>Translated_107_residues
MTAKSKFKSPAFEAIHSAASGLFSVDAIPQETMRNFDKACLNNVDDLQPIEIKALREKLNVSQPVFASYLNTSVSTVQKW
ESGVKRPSGLALKLLTVVRKHGLKVLV
>Mature_106_residues
TAKSKFKSPAFEAIHSAASGLFSVDAIPQETMRNFDKACLNNVDDLQPIEIKALREKLNVSQPVFASYLNTSVSTVQKWE
SGVKRPSGLALKLLTVVRKHGLKVLV

Specific function: Unknown

COG id: COG2944

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11756; Mature: 11625

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAKSKFKSPAFEAIHSAASGLFSVDAIPQETMRNFDKACLNNVDDLQPIEIKALREKLN
CCCCCCCCCHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC
VSQPVFASYLNTSVSTVQKWESGVKRPSGLALKLLTVVRKHGLKVLV
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEECC
>Mature Secondary Structure 
TAKSKFKSPAFEAIHSAASGLFSVDAIPQETMRNFDKACLNNVDDLQPIEIKALREKLN
CCCCCCCCHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC
VSQPVFASYLNTSVSTVQKWESGVKRPSGLALKLLTVVRKHGLKVLV
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA