Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is 238921302
Identifier: 238921302
GI number: 238921302
Start: 3337309
End: 3337548
Strand: Reverse
Name: 238921302
Synonym: NT01EI_3445
Alternate gene names: NA
Gene position: 3337548-3337309 (Counterclockwise)
Preceding gene: 238921303
Following gene: 238921301
Centisome position: 87.55
GC content: 53.33
Gene sequence:
>240_bases ATGAACGAAAACGAGATTTATCACCGTATTCAGCAGGCGCTGGCCAGTGCGCCGCGTAACCGGTACACCGTCGAGCTGCA TCTGCAAATGATCAAATATGCCGACGAACTGGAACACATTACGGCGAAAGCCTTTTGCGAAGGCACTGGCCTGAGCCAGA GCCTCGGCACTGAATTCAGCAAAATGCGTAACTTAACCCGTCGGCTGAAAGCCGCCGGACTGAACACCGATCTGCTGTAA
Upstream 100 bases:
>100_bases TTGTTGAACGGTTTTGTTAGCGGCTCTTAATCATTGAACTCAACGTCAATTTTAGCTAATTTAGCTAAATTATCTAGCAT GTCCACGGGTGCCTGTCTTT
Downstream 100 bases:
>100_bases TCGTTTACAGCACAGAATCGCGCGAAACGAGATATTTAATGGCTATCAAAAAAACCGAACTCTATTCCTCTTTATGGGCA AGCTGCGACGAACTGCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MNENEIYHRIQQALASAPRNRYTVELHLQMIKYADELEHITAKAFCEGTGLSQSLGTEFSKMRNLTRRLKAAGLNTDLL
Sequences:
>Translated_79_residues MNENEIYHRIQQALASAPRNRYTVELHLQMIKYADELEHITAKAFCEGTGLSQSLGTEFSKMRNLTRRLKAAGLNTDLL >Mature_79_residues MNENEIYHRIQQALASAPRNRYTVELHLQMIKYADELEHITAKAFCEGTGLSQSLGTEFSKMRNLTRRLKAAGLNTDLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9022; Mature: 9022
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNENEIYHRIQQALASAPRNRYTVELHLQMIKYADELEHITAKAFCEGTGLSQSLGTEFS CCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH KMRNLTRRLKAAGLNTDLL HHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNENEIYHRIQQALASAPRNRYTVELHLQMIKYADELEHITAKAFCEGTGLSQSLGTEFS CCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH KMRNLTRRLKAAGLNTDLL HHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA