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The map label for this gene is yhcO [H]

Identifier: 238921240

GI number: 238921240

Start: 3271240

End: 3271518

Strand: Reverse

Name: yhcO [H]

Synonym: NT01EI_3383

Alternate gene names: 238921240

Gene position: 3271518-3271240 (Counterclockwise)

Preceding gene: 238921241

Following gene: 238921237

Centisome position: 85.81

GC content: 54.12

Gene sequence:

>279_bases
ATGCAAAAAGTCCAGTTTGATTTTAGCCAGATAGCCGATTTAGCGGCGTTCTATCGCCAGTTTTCCCAGGCCTTTACACT
GGCGTCGACGTTCGGCAATAACCTTGATGCGTTGTGGGATGCGCTGACCGGCGATATTGGAATGCCGCTGGAGATTGCGT
TCATCAACTTTGACGCTGCGAAGAAGCGACGCTTTGCTGCGTTGGTGCTGCTGCTGGAAGCTGCCGAAGAGGAGCTGGAG
GGCGAGCTGCGCTTCAATACCTACGATAGGGTGGCCTGA

Upstream 100 bases:

>100_bases
GTGGTCGTCGTCAGGCGGATCGTGTACTGTATTCTGACAACGGTCTGATTTATGTCACCCATGATCACTATCGACACTTT
ACCCGTATGGGGTGATCGCG

Downstream 100 bases:

>100_bases
GCGCGGTGGAAAACAGCGCTACCGGCCAACCGGCCGGCAGGCGCGTTGTATCAGTCGTTTGCTTCTGCCAGCGTGCGCAG
ATATTGGAAGATCTGGCGTG

Product: barstar

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MQKVQFDFSQIADLAAFYRQFSQAFTLASTFGNNLDALWDALTGDIGMPLEIAFINFDAAKKRRFAALVLLLEAAEEELE
GELRFNTYDRVA

Sequences:

>Translated_92_residues
MQKVQFDFSQIADLAAFYRQFSQAFTLASTFGNNLDALWDALTGDIGMPLEIAFINFDAAKKRRFAALVLLLEAAEEELE
GELRFNTYDRVA
>Mature_92_residues
MQKVQFDFSQIADLAAFYRQFSQAFTLASTFGNNLDALWDALTGDIGMPLEIAFINFDAAKKRRFAALVLLLEAAEEELE
GELRFNTYDRVA

Specific function: Unknown

COG id: COG2732

COG function: function code K; Barstar, RNAse (barnase) inhibitor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the barstar family [H]

Homologues:

Organism=Escherichia coli, GI1789635, Length=88, Percent_Identity=50, Blast_Score=87, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000468 [H]

Pfam domain/function: PF01337 Barstar [H]

EC number: NA

Molecular weight: Translated: 10402; Mature: 10402

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKVQFDFSQIADLAAFYRQFSQAFTLASTFGNNLDALWDALTGDIGMPLEIAFINFDAA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEEECCHH
KKRRFAALVLLLEAAEEELEGELRFNTYDRVA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MQKVQFDFSQIADLAAFYRQFSQAFTLASTFGNNLDALWDALTGDIGMPLEIAFINFDAA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEEECCHH
KKRRFAALVLLLEAAEEELEGELRFNTYDRVA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]