| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is fldB [H]
Identifier: 238921201
GI number: 238921201
Start: 3228408
End: 3228920
Strand: Direct
Name: fldB [H]
Synonym: NT01EI_3343
Alternate gene names: 238921201
Gene position: 3228408-3228920 (Clockwise)
Preceding gene: 238921197
Following gene: 238921204
Centisome position: 84.68
GC content: 61.6
Gene sequence:
>513_bases ATGAAAATCGGTCTTTTTTATGGCTCCAGCACCTGCTACACCGAGATGGCCGCGGAGAGAATCCGTGACATTCTGGGCGC CGATCTGGTCACCCTGCACAACATCCGCGACACCCCGCCCGCACTGATGGCAGGGTACGACATGCTGATCATGGGGATCC CCACCTGGGACTTCGGTGAGTTGCAGGAGGATTGGCAAACCGCGTGGGACGCACTGCCGCCACTGCCGGGAAAAATCGTC GCGCTGTACGGCATGGGCGATCAGCAGGGTTACGGAGAATGGTTTCAGGACGCGCTCGGCATGCTGCACGATCGTCTGCT GACGCTCGGTGCCCGCCCGATCGGCTACTGGTCGACGGCAGGCTATGCGTTCACCGCATCACGGGCAACGCTGGACGACG GACGTCTGTTTACCGGGCTGGCACTGGACGAGGTTAATCAGTTCGATCTCAGTGAGGCGCGGCTCCAGCGCTGGTGCCAG CAAATCATGCTGGAGACGGCCGGGCTGCTGTAG
Upstream 100 bases:
>100_bases CGTGCGGCGCCTTATCGACGGCCAGCCTACAGGATGCGGTCAGTGGTTTCAAATCTGTTACACTGCCCGTATCCGCTTGG ACAACCATGGCAAATGCACA
Downstream 100 bases:
>100_bases CGACGACGACGGTGCTGTGACCCGCTATACGCGATCGTCGCCCGTATCGAGCAGCGCGCGGCGCAGCTGCCCCCACTCTT CGCGGCTCATGCTGTCGGCC
Product: flavodoxin FldB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MKIGLFYGSSTCYTEMAAERIRDILGADLVTLHNIRDTPPALMAGYDMLIMGIPTWDFGELQEDWQTAWDALPPLPGKIV ALYGMGDQQGYGEWFQDALGMLHDRLLTLGARPIGYWSTAGYAFTASRATLDDGRLFTGLALDEVNQFDLSEARLQRWCQ QIMLETAGLL
Sequences:
>Translated_170_residues MKIGLFYGSSTCYTEMAAERIRDILGADLVTLHNIRDTPPALMAGYDMLIMGIPTWDFGELQEDWQTAWDALPPLPGKIV ALYGMGDQQGYGEWFQDALGMLHDRLLTLGARPIGYWSTAGYAFTASRATLDDGRLFTGLALDEVNQFDLSEARLQRWCQ QIMLETAGLL >Mature_170_residues MKIGLFYGSSTCYTEMAAERIRDILGADLVTLHNIRDTPPALMAGYDMLIMGIPTWDFGELQEDWQTAWDALPPLPGKIV ALYGMGDQQGYGEWFQDALGMLHDRLLTLGARPIGYWSTAGYAFTASRATLDDGRLFTGLALDEVNQFDLSEARLQRWCQ QIMLETAGLL
Specific function: Low-potential electron donor to a number of redox enzymes (Potential) [H]
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Escherichia coli, GI1789262, Length=169, Percent_Identity=66.2721893491124, Blast_Score=241, Evalue=1e-65, Organism=Escherichia coli, GI1786900, Length=164, Percent_Identity=43.2926829268293, Blast_Score=137, Evalue=4e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008254 - InterPro: IPR001226 - InterPro: IPR010086 [H]
Pfam domain/function: PF00258 Flavodoxin_1 [H]
EC number: NA
Molecular weight: Translated: 18974; Mature: 18974
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGLFYGSSTCYTEMAAERIRDILGADLVTLHNIRDTPPALMAGYDMLIMGIPTWDFGE CEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHCCCEEEEECCCCCHHH LQEDWQTAWDALPPLPGKIVALYGMGDQQGYGEWFQDALGMLHDRLLTLGARPIGYWSTA HHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GYAFTASRATLDDGRLFTGLALDEVNQFDLSEARLQRWCQQIMLETAGLL CEEEECCCCCCCCCCEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKIGLFYGSSTCYTEMAAERIRDILGADLVTLHNIRDTPPALMAGYDMLIMGIPTWDFGE CEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHCCCEEEEECCCCCHHH LQEDWQTAWDALPPLPGKIVALYGMGDQQGYGEWFQDALGMLHDRLLTLGARPIGYWSTA HHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GYAFTASRATLDDGRLFTGLALDEVNQFDLSEARLQRWCQQIMLETAGLL CEEEECCCCCCCCCCEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]