The gene/protein map for NC_012779 is currently unavailable.
Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

Click here to switch to the map view.

The map label for this gene is 238921184

Identifier: 238921184

GI number: 238921184

Start: 3204784

End: 3206685

Strand: Reverse

Name: 238921184

Synonym: NT01EI_3325

Alternate gene names: NA

Gene position: 3206685-3204784 (Counterclockwise)

Preceding gene: 238921185

Following gene: 238921183

Centisome position: 84.11

GC content: 56.31

Gene sequence:

>1902_bases
ATGCACAGCGACTATGCCTCGGTGGAGAGCCAGAGCGGCATCTTTGCCGGTACCGGTGGCTTTGATATCACCGTGGGTAA
TCATACCCAGCTGGACGGCGCGGCCATTGCCAGCGCGGCCGGTCAGGAGAGCAACCGCTTAGATAGCGGAACCCTGGGCT
TTGCCGATATCGACAACCGCGCTGAGTTCAGGGCGCAGCACCAGGGGTTTGGCCTTAGCTCCGGCGGCAGCATTGGCGGC
CAGTTCGCGGGCAATATGGCCAATAGCCTGTTGGCGGGCGCCAATCATCAGGAGCGCGCCCGCGGCACCACCCAGTCGGC
TATCGCCGACGGCGCGATCGTCGTGCGCGATCGGGCCAACCAGCAGCAGGATGTCGCCGGGTTAGCGCGCGACACGGAGC
GGGCGCACCAGCCCCTCACCCCTATCTTCGACAAGGAGAAAGCGCAGCGGCGCCTGCAGCAGGCCCGGCTGATCGGTGAG
ATTGGCAATCAGGTGGCCGATATTGCACGGACAGAGGGCGAGATCGCCGGGGAAAAAGCCCGGCGTGACCCGACGGCCCT
GAATCAGGCGCGTACCGCACTGGAAGCCAGCGGTAAACCGTTTACCGAGAAGGATGTAGCGCAGCGGGCGTATAACACCG
GCATGCGCGATTCCGGGTTTGGCACCGGAGGGCAATACCAGCAGGCGATTCAGGCGGCCACGGCGGCGGTACAGGGGCTG
GCGGGCGGCAACCTGCAGGCGGCGCTGGCGGGCGGCGCGGCGCCGTATATTAGTGAGATAATCAAGCAGAGCACCCCGGA
CGGCGCGGGGCGTGTGGCGGCCCATGCGGTGGTAAATGCGGCGCTTGCCGCAGCACAGGGGAATAACGCCCTTGCCGGAG
CCGCGGGTGCGGCCACCGGCGAAATCGTCGGCATGCTGGCCACGGAGATATACCAGAAACCGGTCGCTGAGCTCAGCGAA
AGCGAGAAACAGACCGCTTCAACACTGGCCACCGTTGCCGCCGGACTGGCCAGTGGTCTGGTGGGCGACGCGGGGGCTTC
CGCGCTCGCCGGGGCAGAGTCGGGTAAGACGACGGTGGAGAATAATTTCCTTGGGACAAAATCGTCCAGCAAGCTAGATA
AAATTATCGAAAAAATACAGCATGGTGATAAGACGTTAGCGACGGCGAAAGAGTTACTTCAATTAGAAAACGCAGACAAA
CGGAGTGACATACTTATCACGAAGTTTGTGTCAGATCCTACCCAACTGAATAGCGCTGAACGAAGCGAATTAGCTGGTTA
TTTGCGTATTTACGCAGCAGAGATGGAGACGGAATATGGTACAGGTGTTGCTCAGGAGCTAGTCAATGGATTGCTTTCAG
GGAGCGACTATCTAAAACGAGGCCCAGACTCTGATGTAATGGCTGAGGCGCAAAATATAATGAGGGCATGGGTATATCAT
AAATCCAATGCGAGTATTGGTGATGCACCGCTGCTGTTTTCTGGCAGTATGCTGGGTATTACAATAAAAGGAGGTATGGC
TGTTAATGCGGCGATAGGCATAGGTGTCAACACTGTGGTTCAATTAAGTGGAGACGATCCTTTCAGTTATGTGGATGCAA
GTATTGCGGGATTGATATCAGCCGCGACGACAGGAAAAGGTTGGCAGGCTTCCGCAGCCATTAATATGGGTGGGGCCGCC
GTTAGCAGTGCACTTAAAGGAGAGGATCCAACTAATGCAGTGATCGGAGCTGGAATTGGTAGTGTGGGTGGTAGTATAGG
AGGGAAAACTGTTGACTCATTATCTACAATAACAAATCAAGCAGTAAAGGATGTTATTGGTACAGTTACTGGTTCTACAC
TTAATGAAGTCACAGGAAAGATAGTGAAAGATGAATTAGATGGAACTAATAACAATGAATAG

Upstream 100 bases:

>100_bases
AGCAGCAGCAACAACCAACCTGATAGATGCAGGAGCTAGCGCCGGGGGGAGCATCGGCTTCGGCAATGGCTCTCTGGGTA
TCGCCGCCAGCCGCGATAAG

Downstream 100 bases:

>100_bases
GTTTAAAAAAGTGGGTGTTGCTTGGTTTCTTTTTCTGATTTTTTATTGTTCGTTTTTGATTTCTTTTATACTGCTTTTAT
ATATATTTGGGATATCAATT

Product: hypothetical protein

Products: NA

Alternate protein names: Filamentous Hemagglutinin; Filamentous Haemagglutinin Outer Membrane Protein; Hemagglutinin-Related Protein; Adhesin/Hemagglutinin; ShlA/HecA/FhaA Exofamily Protein; Adhesin; Hemolysin; Filamentous Haemagglutinin; Adhesin/Hemolysin; Cell Surface Protein; Large Exoprotein Involved In Heme Utilization Or Adhesion; Adhesin HecA Family; Adhesin/Hemagglutinin/Hemolysin; Hemolysin/Hemagglutinin-Like Protein; Contact-Dependent Inhibitor A; Adhesin/Haemagluttinin; Filamentous Haemagglutinin Family Protein; Contact-Dependent Inhibition Of Growth Factor CdiA; Exoprotein Adhesin Or Hemolysin; Filamentous Haemagglutinin Adhesin HecA; Member Of ShlA/HecA/FhaA Exoprotein Family; Haemolysin-Like Protein; Hemolysin/Hemagglutinin-Like Protein HecA; Haemolysin/Haemagglutinin; AT-2 Family Transporter; Cell Surface Haemagluttinin Protein; Hemagglutinin/Hemolysin-Related Protein; Filamentous Hemagglutinin / Adhesin; Hemagglutinin/Adhesin Repeat-Containing Protein; Hemagglutinin/Hemolysin Family Protein; Fimbrial Adhesin

Number of amino acids: Translated: 633; Mature: 633

Protein sequence:

>633_residues
MHSDYASVESQSGIFAGTGGFDITVGNHTQLDGAAIASAAGQESNRLDSGTLGFADIDNRAEFRAQHQGFGLSSGGSIGG
QFAGNMANSLLAGANHQERARGTTQSAIADGAIVVRDRANQQQDVAGLARDTERAHQPLTPIFDKEKAQRRLQQARLIGE
IGNQVADIARTEGEIAGEKARRDPTALNQARTALEASGKPFTEKDVAQRAYNTGMRDSGFGTGGQYQQAIQAATAAVQGL
AGGNLQAALAGGAAPYISEIIKQSTPDGAGRVAAHAVVNAALAAAQGNNALAGAAGAATGEIVGMLATEIYQKPVAELSE
SEKQTASTLATVAAGLASGLVGDAGASALAGAESGKTTVENNFLGTKSSSKLDKIIEKIQHGDKTLATAKELLQLENADK
RSDILITKFVSDPTQLNSAERSELAGYLRIYAAEMETEYGTGVAQELVNGLLSGSDYLKRGPDSDVMAEAQNIMRAWVYH
KSNASIGDAPLLFSGSMLGITIKGGMAVNAAIGIGVNTVVQLSGDDPFSYVDASIAGLISAATTGKGWQASAAINMGGAA
VSSALKGEDPTNAVIGAGIGSVGGSIGGKTVDSLSTITNQAVKDVIGTVTGSTLNEVTGKIVKDELDGTNNNE

Sequences:

>Translated_633_residues
MHSDYASVESQSGIFAGTGGFDITVGNHTQLDGAAIASAAGQESNRLDSGTLGFADIDNRAEFRAQHQGFGLSSGGSIGG
QFAGNMANSLLAGANHQERARGTTQSAIADGAIVVRDRANQQQDVAGLARDTERAHQPLTPIFDKEKAQRRLQQARLIGE
IGNQVADIARTEGEIAGEKARRDPTALNQARTALEASGKPFTEKDVAQRAYNTGMRDSGFGTGGQYQQAIQAATAAVQGL
AGGNLQAALAGGAAPYISEIIKQSTPDGAGRVAAHAVVNAALAAAQGNNALAGAAGAATGEIVGMLATEIYQKPVAELSE
SEKQTASTLATVAAGLASGLVGDAGASALAGAESGKTTVENNFLGTKSSSKLDKIIEKIQHGDKTLATAKELLQLENADK
RSDILITKFVSDPTQLNSAERSELAGYLRIYAAEMETEYGTGVAQELVNGLLSGSDYLKRGPDSDVMAEAQNIMRAWVYH
KSNASIGDAPLLFSGSMLGITIKGGMAVNAAIGIGVNTVVQLSGDDPFSYVDASIAGLISAATTGKGWQASAAINMGGAA
VSSALKGEDPTNAVIGAGIGSVGGSIGGKTVDSLSTITNQAVKDVIGTVTGSTLNEVTGKIVKDELDGTNNNE
>Mature_633_residues
MHSDYASVESQSGIFAGTGGFDITVGNHTQLDGAAIASAAGQESNRLDSGTLGFADIDNRAEFRAQHQGFGLSSGGSIGG
QFAGNMANSLLAGANHQERARGTTQSAIADGAIVVRDRANQQQDVAGLARDTERAHQPLTPIFDKEKAQRRLQQARLIGE
IGNQVADIARTEGEIAGEKARRDPTALNQARTALEASGKPFTEKDVAQRAYNTGMRDSGFGTGGQYQQAIQAATAAVQGL
AGGNLQAALAGGAAPYISEIIKQSTPDGAGRVAAHAVVNAALAAAQGNNALAGAAGAATGEIVGMLATEIYQKPVAELSE
SEKQTASTLATVAAGLASGLVGDAGASALAGAESGKTTVENNFLGTKSSSKLDKIIEKIQHGDKTLATAKELLQLENADK
RSDILITKFVSDPTQLNSAERSELAGYLRIYAAEMETEYGTGVAQELVNGLLSGSDYLKRGPDSDVMAEAQNIMRAWVYH
KSNASIGDAPLLFSGSMLGITIKGGMAVNAAIGIGVNTVVQLSGDDPFSYVDASIAGLISAATTGKGWQASAAINMGGAA
VSSALKGEDPTNAVIGAGIGSVGGSIGGKTVDSLSTITNQAVKDVIGTVTGSTLNEVTGKIVKDELDGTNNNE

Specific function: Unknown

COG id: COG3210

COG function: function code U; Large exoproteins involved in heme utilization or adhesion

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64509; Mature: 64509

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSDYASVESQSGIFAGTGGFDITVGNHTQLDGAAIASAAGQESNRLDSGTLGFADIDNR
CCCCHHCCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCH
AEFRAQHQGFGLSSGGSIGGQFAGNMANSLLAGANHQERARGTTQSAIADGAIVVRDRAN
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCHHHHHHCCEEEEECCCC
QQQDVAGLARDTERAHQPLTPIFDKEKAQRRLQQARLIGEIGNQVADIARTEGEIAGEKA
CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHH
RRDPTALNQARTALEASGKPFTEKDVAQRAYNTGMRDSGFGTGGQYQQAIQAATAAVQGL
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHC
AGGNLQAALAGGAAPYISEIIKQSTPDGAGRVAAHAVVNAALAAAQGNNALAGAAGAATG
CCCCEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
EIVGMLATEIYQKPVAELSESEKQTASTLATVAAGLASGLVGDAGASALAGAESGKTTVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCC
NNFLGTKSSSKLDKIIEKIQHGDKTLATAKELLQLENADKRSDILITKFVSDPTQLNSAE
CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHCCCHH
RSELAGYLRIYAAEMETEYGTGVAQELVNGLLSGSDYLKRGPDSDVMAEAQNIMRAWVYH
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHC
KSNASIGDAPLLFSGSMLGITIKGGMAVNAAIGIGVNTVVQLSGDDPFSYVDASIAGLIS
CCCCCCCCCCEEEECCEEEEEEECCEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHH
AATTGKGWQASAAINMGGAAVSSALKGEDPTNAVIGAGIGSVGGSIGGKTVDSLSTITNQ
HHCCCCCCEEEEEEECCHHHHHHHHCCCCCCCCEEECCHHHCCCCCCCHHHHHHHHHHHH
AVKDVIGTVTGSTLNEVTGKIVKDELDGTNNNE
HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MHSDYASVESQSGIFAGTGGFDITVGNHTQLDGAAIASAAGQESNRLDSGTLGFADIDNR
CCCCHHCCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCH
AEFRAQHQGFGLSSGGSIGGQFAGNMANSLLAGANHQERARGTTQSAIADGAIVVRDRAN
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCHHHHHHCCEEEEECCCC
QQQDVAGLARDTERAHQPLTPIFDKEKAQRRLQQARLIGEIGNQVADIARTEGEIAGEKA
CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHH
RRDPTALNQARTALEASGKPFTEKDVAQRAYNTGMRDSGFGTGGQYQQAIQAATAAVQGL
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHC
AGGNLQAALAGGAAPYISEIIKQSTPDGAGRVAAHAVVNAALAAAQGNNALAGAAGAATG
CCCCEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
EIVGMLATEIYQKPVAELSESEKQTASTLATVAAGLASGLVGDAGASALAGAESGKTTVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCC
NNFLGTKSSSKLDKIIEKIQHGDKTLATAKELLQLENADKRSDILITKFVSDPTQLNSAE
CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHCCCHH
RSELAGYLRIYAAEMETEYGTGVAQELVNGLLSGSDYLKRGPDSDVMAEAQNIMRAWVYH
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHC
KSNASIGDAPLLFSGSMLGITIKGGMAVNAAIGIGVNTVVQLSGDDPFSYVDASIAGLIS
CCCCCCCCCCEEEECCEEEEEEECCEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHH
AATTGKGWQASAAINMGGAAVSSALKGEDPTNAVIGAGIGSVGGSIGGKTVDSLSTITNQ
HHCCCCCCEEEEEEECCHHHHHHHHCCCCCCCCEEECCHHHCCCCCCCHHHHHHHHHHHH
AVKDVIGTVTGSTLNEVTGKIVKDELDGTNNNE
HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA