Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is 238921177
Identifier: 238921177
GI number: 238921177
Start: 3201209
End: 3201838
Strand: Reverse
Name: 238921177
Synonym: NT01EI_3318
Alternate gene names: NA
Gene position: 3201838-3201209 (Counterclockwise)
Preceding gene: 238921178
Following gene: 238921175
Centisome position: 83.99
GC content: 43.17
Gene sequence:
>630_bases ATGTATGAACAGCGCCGGGAAGAGTTAACAAGTATCCTGTCAACAGGTGCGGACTTTGTGCCAGTGGTTGGCGATATCAA GAGTGTTGCGGAAGCACAAAGCGCTCTGGATTATCTGGTTGCTGCGATAGGTATCATTCCGGGAGCGGGAGATGCGGCAG GTAAGGCGGTCAAGGCGGCAGAAGAAGCTCTAAGTAAAGGGGATATCTCTGAAGCCTCGAAGTTGATTAATAAGGCGAGT GATGAGATATCAGCTTATAACTCAGCCACCTATCCGAAATTGAAAGATGATTTGCTACAACAAAATCTAAATAATATCGC TAAACAAGACCCACGATTAGAAGCGGTTGTCAAAGGTGATAATAGAAAATTAAATTATGGTGTTGGTAATGGTACCCGGG AAGAAGCTGATAAACTAGGTAAAATGTGGGTTGGGGATGGAGCTAAACCAACAAGTGATGGAACTGGATTAATGAGTGCT GATGGAACACGTGTCTATCGCTTTCCTGCATCAAAGAAAGACAGCCCATATGCTACAACAGGTACTCAGGCGAACTTTGA AACCTTTAAAATAGATCCAAGTACAGGTAATAAAGTTAGAATCGGCAATGGACACCTAGATATAGAATAA
Upstream 100 bases:
>100_bases ACACTTGAACAACAGGCTAAAGAACATGTTGAAGCTGAAAATGAGCAGTACAGGAAAGAAAACTGTGGCGGGATGAACGC GGAAGCCTGCTCGGCGAAAA
Downstream 100 bases:
>100_bases GGAGTTGGAGTGAAAGCTGCCTTAAAAAGTATTTCAAATGATGACTGTGACTTGAATAAATACTTCCCAGAAGATGAAAC AGTATTTTTTCTTCGTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MYEQRREELTSILSTGADFVPVVGDIKSVAEAQSALDYLVAAIGIIPGAGDAAGKAVKAAEEALSKGDISEASKLINKAS DEISAYNSATYPKLKDDLLQQNLNNIAKQDPRLEAVVKGDNRKLNYGVGNGTREEADKLGKMWVGDGAKPTSDGTGLMSA DGTRVYRFPASKKDSPYATTGTQANFETFKIDPSTGNKVRIGNGHLDIE
Sequences:
>Translated_209_residues MYEQRREELTSILSTGADFVPVVGDIKSVAEAQSALDYLVAAIGIIPGAGDAAGKAVKAAEEALSKGDISEASKLINKAS DEISAYNSATYPKLKDDLLQQNLNNIAKQDPRLEAVVKGDNRKLNYGVGNGTREEADKLGKMWVGDGAKPTSDGTGLMSA DGTRVYRFPASKKDSPYATTGTQANFETFKIDPSTGNKVRIGNGHLDIE >Mature_209_residues MYEQRREELTSILSTGADFVPVVGDIKSVAEAQSALDYLVAAIGIIPGAGDAAGKAVKAAEEALSKGDISEASKLINKAS DEISAYNSATYPKLKDDLLQQNLNNIAKQDPRLEAVVKGDNRKLNYGVGNGTREEADKLGKMWVGDGAKPTSDGTGLMSA DGTRVYRFPASKKDSPYATTGTQANFETFKIDPSTGNKVRIGNGHLDIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22198; Mature: 22198
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYEQRREELTSILSTGADFVPVVGDIKSVAEAQSALDYLVAAIGIIPGAGDAAGKAVKAA CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH EEALSKGDISEASKLINKASDEISAYNSATYPKLKDDLLQQNLNNIAKQDPRLEAVVKGD HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC NRKLNYGVGNGTREEADKLGKMWVGDGAKPTSDGTGLMSADGTRVYRFPASKKDSPYATT CCEEEECCCCCCHHHHHHHHCEECCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCC GTQANFETFKIDPSTGNKVRIGNGHLDIE CCCCCCEEEEECCCCCCEEEECCCCCCCC >Mature Secondary Structure MYEQRREELTSILSTGADFVPVVGDIKSVAEAQSALDYLVAAIGIIPGAGDAAGKAVKAA CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH EEALSKGDISEASKLINKASDEISAYNSATYPKLKDDLLQQNLNNIAKQDPRLEAVVKGD HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC NRKLNYGVGNGTREEADKLGKMWVGDGAKPTSDGTGLMSADGTRVYRFPASKKDSPYATT CCEEEECCCCCCHHHHHHHHCEECCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCC GTQANFETFKIDPSTGNKVRIGNGHLDIE CCCCCCEEEEECCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA