Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is 238921175
Identifier: 238921175
GI number: 238921175
Start: 3200852
End: 3200989
Strand: Reverse
Name: 238921175
Synonym: NT01EI_3316
Alternate gene names: NA
Gene position: 3200989-3200852 (Counterclockwise)
Preceding gene: 238921177
Following gene: 238921174
Centisome position: 83.96
GC content: 41.3
Gene sequence:
>138_bases GTGCGTAAGTATGATCTTGATGAGATAAAAAAAGTCATCACTGATTATATCGAGCAATGCGAAGGCAATGATTGGATGGA GATAGCCCAAAAACTCTCTCGGGTCTTTGCTTGGGAGTTCGAGGACTATCAACCTTAA
Upstream 100 bases:
>100_bases CGACAGTGATGGTGCAGATAATTTTGATCTCGGTGTCTGCACTCCCGAATGGCTTTGTAAACATCAGTGGGGGCCAGACC TGATGCGTCATACATTGCTT
Downstream 100 bases:
>100_bases TGTCAGGGCCGGGGAGCAAGGGGCGCTTCGCGTGCCACATAAACGACAGTGAGCGGCCCGCCCCCGCGTACAGCGCTCTG GTGCGGAGCAGCGCACTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 45; Mature: 45
Protein sequence:
>45_residues MRKYDLDEIKKVITDYIEQCEGNDWMEIAQKLSRVFAWEFEDYQP
Sequences:
>Translated_45_residues MRKYDLDEIKKVITDYIEQCEGNDWMEIAQKLSRVFAWEFEDYQP >Mature_45_residues MRKYDLDEIKKVITDYIEQCEGNDWMEIAQKLSRVFAWEFEDYQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5575; Mature: 5575
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKYDLDEIKKVITDYIEQCEGNDWMEIAQKLSRVFAWEFEDYQP CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRKYDLDEIKKVITDYIEQCEGNDWMEIAQKLSRVFAWEFEDYQP CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA