Click here to switch to the map view.

The map label for this gene is hdeB [H]

Identifier: 238921107

GI number: 238921107

Start: 3124641

End: 3124958

Strand: Direct

Name: hdeB [H]

Synonym: NT01EI_3246

Alternate gene names: 238921107

Gene position: 3124641-3124958 (Clockwise)

Preceding gene: 238921104

Following gene: 238921108

Centisome position: 81.96

GC content: 52.83

Gene sequence:

>318_bases
ATGAAAATGACGCTACTCGCCGCAGTTCTGGGCACACTGACGCTGGGCGTTGCCAGTCTGGCCCAGGCCGCCACGGAAAC
CACTCCGCAGAATATGACCTGCAAAGAATTTGTTAACCTGAACCCTAAGGCGATGACACCGGTCGCCTTCTGGATGCTCA
ATCAAGATACTGATTATAAAGGCGGCGACTACGTCGACTGGAATGAAGTCGAAACTATCGCCGTTCCCCAGGTCATGAAG
GTCTGCAAACAGCATCCGCAGAAGAAGGTCATGGATATCAAAGGTGAGATTAAGCCTGCCGACAACGCGGCGCACTAA

Upstream 100 bases:

>100_bases
CTTGAAAAGGCCCCGCATTGCTGGCAAGATAACAGAAATATGTAATACAAAAATACATATTCGATTTATCGTACAATAAT
TAAGTGAGGCAGTGACAGTA

Downstream 100 bases:

>100_bases
TCCACTTTAGCCCGGCTCCGTTGAGCCGGGCGCGTTTCTTCCCTGCAGCCCCACGCCGAATGAACCGCCCGCCCACAGCA
TCTACACCTAATGGGCCCCA

Product: acid-resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MKMTLLAAVLGTLTLGVASLAQAATETTPQNMTCKEFVNLNPKAMTPVAFWMLNQDTDYKGGDYVDWNEVETIAVPQVMK
VCKQHPQKKVMDIKGEIKPADNAAH

Sequences:

>Translated_105_residues
MKMTLLAAVLGTLTLGVASLAQAATETTPQNMTCKEFVNLNPKAMTPVAFWMLNQDTDYKGGDYVDWNEVETIAVPQVMK
VCKQHPQKKVMDIKGEIKPADNAAH
>Mature_105_residues
MKMTLLAAVLGTLTLGVASLAQAATETTPQNMTCKEFVNLNPKAMTPVAFWMLNQDTDYKGGDYVDWNEVETIAVPQVMK
VCKQHPQKKVMDIKGEIKPADNAAH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082279, Length=95, Percent_Identity=45.2631578947368, Blast_Score=91, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010486 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11537; Mature: 11537

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMTLLAAVLGTLTLGVASLAQAATETTPQNMTCKEFVNLNPKAMTPVAFWMLNQDTDYK
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHEEEECCCCCCC
GGDYVDWNEVETIAVPQVMKVCKQHPQKKVMDIKGEIKPADNAAH
CCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKMTLLAAVLGTLTLGVASLAQAATETTPQNMTCKEFVNLNPKAMTPVAFWMLNQDTDYK
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHEEEECCCCCCC
GGDYVDWNEVETIAVPQVMKVCKQHPQKKVMDIKGEIKPADNAAH
CCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]