| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920952
Identifier: 238920952
GI number: 238920952
Start: 2971073
End: 2971195
Strand: Direct
Name: 238920952
Synonym: NT01EI_3082
Alternate gene names: NA
Gene position: 2971073-2971195 (Clockwise)
Preceding gene: 238920950
Following gene: 238920955
Centisome position: 77.93
GC content: 46.34
Gene sequence:
>123_bases ATGATATCTCCTATCGAGGATCCGTTTTTAATCATATTAAGCGCCAGCATCTACGTCGATCCGGTGATAACAATGCAGGA GCAAACCGTACTCTGCCATATGCTCATTCCCGCACCGACGTAA
Upstream 100 bases:
>100_bases GGCAACCTCGACGCAGGAGCGCGCCGGAAACGGAACGCCGTGATCCGTGAAAATACCCCATAGGCTGCGTTGATGCAGGT TAATAATCAATGTAGTTAAT
Downstream 100 bases:
>100_bases AACGGAAAATCATCTCTATCCGACTGAGTATTGTTTGCTTTCCATATTGACATCCATTTTTCTGCGCTAATTTTTCAATT GTTTTTGTGTCATGATGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 40; Mature: 40
Protein sequence:
>40_residues MISPIEDPFLIILSASIYVDPVITMQEQTVLCHMLIPAPT
Sequences:
>Translated_40_residues MISPIEDPFLIILSASIYVDPVITMQEQTVLCHMLIPAPT >Mature_40_residues MISPIEDPFLIILSASIYVDPVITMQEQTVLCHMLIPAPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4441; Mature: 4441
Theoretical pI: Translated: 3.74; Mature: 3.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 7.5 %Met (Translated Protein) 10.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 7.5 %Met (Mature Protein) 10.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISPIEDPFLIILSASIYVDPVITMQEQTVLCHMLIPAPT CCCCCCCCEEEEEECCEEECEEEEECCCEEEEEEEECCCC >Mature Secondary Structure MISPIEDPFLIILSASIYVDPVITMQEQTVLCHMLIPAPT CCCCCCCCEEEEEECCEEECEEEEECCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA