| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920932
Identifier: 238920932
GI number: 238920932
Start: 2955997
End: 2956116
Strand: Direct
Name: 238920932
Synonym: NT01EI_3060
Alternate gene names: NA
Gene position: 2955997-2956116 (Clockwise)
Preceding gene: 238920926
Following gene: 238920933
Centisome position: 77.54
GC content: 26.67
Gene sequence:
>120_bases ATGTTCTTTGATCTAAATCAATTTTATTTGGCTTGGTATTTTTACCATATTGGCAAATTTATGTTTTACATCAATTTTGA TAAAAATTGCCATAAGGTAAAAAGAGGGGGTTTTTGCTAA
Upstream 100 bases:
>100_bases AGCAAAAATCGGCCAATTCGGTCATGGTGCCAGCCCCACCGGCGGGCCATTTGGTAAAACCAATGTTGTCTTGATGTGTT ATATACCAGTTAAACAACCC
Downstream 100 bases:
>100_bases GGAGACGGCGTGAAATGCGCCGCTGGGCGGTTCCCCTGCTAGCGGGGACAGGGTAAGCTACCTTTAAGGCAGCCCAAAGC CGCAATGCACCGGAAAACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 39; Mature: 39
Protein sequence:
>39_residues MFFDLNQFYLAWYFYHIGKFMFYINFDKNCHKVKRGGFC
Sequences:
>Translated_39_residues MFFDLNQFYLAWYFYHIGKFMFYINFDKNCHKVKRGGFC >Mature_39_residues MFFDLNQFYLAWYFYHIGKFMFYINFDKNCHKVKRGGFC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4941; Mature: 4941
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 10.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFDLNQFYLAWYFYHIGKFMFYINFDKNCHKVKRGGFC CCCCCHHHHHHHHHHHHHHEEEEEECCCCCHHHCCCCCC >Mature Secondary Structure MFFDLNQFYLAWYFYHIGKFMFYINFDKNCHKVKRGGFC CCCCCHHHHHHHHHHHHHHEEEEEECCCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA