| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is insF7 [C]
Identifier: 238920857
GI number: 238920857
Start: 2873142
End: 2873435
Strand: Direct
Name: insF7 [C]
Synonym: NT01EI_2983
Alternate gene names: 238920857
Gene position: 2873142-2873435 (Clockwise)
Preceding gene: 238920851
Following gene: 238920860
Centisome position: 75.36
GC content: 45.24
Gene sequence:
>294_bases ATGAATAGTCGATGGGATGCGAAAAAAGCACTAAAAGAATCGGGTTATTTTTCAAACAATAATAAATTAGCTATCGATAA CATTAACGATGATATCATTGGTGGGTATAATTCCGTGGCCGAATCGTTCTTCAGTTCGCTGAAAAAAGAGCGCATCAGAA AATGCGTCTATAAAACCCGGGAACTGGCTCGGACGGATATCTTCGATTACATTGAAGCCTTTTACAACCGGGCCCGCCGC CACAGTCACCCAGGAGGCGTTAGTCCGGAGGCCTTTGAACGGGCCTCTTCGTGA
Upstream 100 bases:
>100_bases CTAAAGCAGCTATTGCAGTATGTGAAGAAGCAACACAAAAAATCTTTTTGTTCTTTTCGTAGAAGGTGGGTACATTATTG ATGGTAAACTCAGGCTTGAT
Downstream 100 bases:
>100_bases GGACAGAATTTGTTTATGTTTTTGGGGGCAGTCCATTCATTAACAAAGCCGCTATTTAGCGGCTTTTACCAAAAATACCT TTATTTAATGCACTCGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Integrase Catalytic Region; IS3 Family Transposase; Transposase InsF For Insertion Sequence IS3A/B/C/D/E/FA; Integrase; ISxac3 Transposase; Transposase For Insertion Sequence Element; ISCps2 Transposase OrfB; Transposase Subunit B; IS3 Transposase; ISEhe3 OrfB; Integrase Core Domain Protein; Transposase B; Integrase Catalytic Subunit; ISPsy26 Transposase OrfB; ISEc14 Transposase B; Transposase OrfB For Insertion Sequence Element; Transposase Tra5 Related Protein
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MNSRWDAKKALKESGYFSNNNKLAIDNINDDIIGGYNSVAESFFSSLKKERIRKCVYKTRELARTDIFDYIEAFYNRARR HSHPGGVSPEAFERASS
Sequences:
>Translated_97_residues MNSRWDAKKALKESGYFSNNNKLAIDNINDDIIGGYNSVAESFFSSLKKERIRKCVYKTRELARTDIFDYIEAFYNRARR HSHPGGVSPEAFERASS >Mature_97_residues MNSRWDAKKALKESGYFSNNNKLAIDNINDDIIGGYNSVAESFFSSLKKERIRKCVYKTRELARTDIFDYIEAFYNRARR HSHPGGVSPEAFERASS
Specific function: Involved in the transposition of the insertion sequence is3 [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788405, Length=57, Percent_Identity=54.3859649122807, Blast_Score=63, Evalue=4e-12, Organism=Escherichia coli, GI1787263, Length=57, Percent_Identity=54.3859649122807, Blast_Score=63, Evalue=4e-12, Organism=Escherichia coli, GI1786753, Length=57, Percent_Identity=54.3859649122807, Blast_Score=63, Evalue=4e-12, Organism=Escherichia coli, GI1786570, Length=57, Percent_Identity=54.3859649122807, Blast_Score=63, Evalue=4e-12, Organism=Escherichia coli, GI1786490, Length=57, Percent_Identity=54.3859649122807, Blast_Score=63, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11172; Mature: 11172
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSRWDAKKALKESGYFSNNNKLAIDNINDDIIGGYNSVAESFFSSLKKERIRKCVYKTR CCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ELARTDIFDYIEAFYNRARRHSHPGGVSPEAFERASS HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCC >Mature Secondary Structure MNSRWDAKKALKESGYFSNNNKLAIDNINDDIIGGYNSVAESFFSSLKKERIRKCVYKTR CCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ELARTDIFDYIEAFYNRARRHSHPGGVSPEAFERASS HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA