Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
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Accession | NC_012778 |
Length | 2,144,190 |
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The map label for this gene is luxQ [H]
Identifier: 238917554
GI number: 238917554
Start: 1691994
End: 1694558
Strand: Reverse
Name: luxQ [H]
Synonym: EUBELI_01633
Alternate gene names: 238917554
Gene position: 1694558-1691994 (Counterclockwise)
Preceding gene: 238917555
Following gene: 238917553
Centisome position: 79.03
GC content: 36.14
Gene sequence:
>2565_bases TTGACCAGAGGAAAGGAAATAAGCCAGATGAAGAAAAATGAGAATGGCATATATTTTTTTGCAGCAGTTGGAGTGGCAAT AGCTGTATTTATGTGTGTCGGTATTATATTATTTAATTACTCAGTTAATGTGAAAAAGGAATTATATGAGACAAGTTCGA GAAATCTTAATGAAGTATATAAACAGGTAAGTGAGAAATTCCTTCAGATAACCGGGCAGCAATGGAAGCTGCTGCGAATG ACAGGCGATTTTATAAATGAGGCTGATGGAAATGAAGAAGATATCAGATCTTTTCTGAATGAATGGAAAAATGAGTGGCA TTATACAGAATTTTATTTTGTAGATGATGACTGTAACTATTTGTCATCGGCAGGCAGGAGGGGATATCTTGAGCTTGGAA ATACATGGAAGAGCCTTGTTATAAACAGGGAGAGTGTTATAGTTGACGGCTCAAATCCTGGCAGTGATGAAGTTATGTTT TTTGCCATACCTGTAGATCCGGCATATATTAATGGTTTTTCTTATAGTTCAATAGCTGTTTCGTACAATACAGACAGTAT TAACAGAGAATTGGGAATCAAGGCATTTGCTAAGGATACAAGCAGTTACATAGTATATGCTAATGGCGATATAGTTTTGA AGTCAGAAGGAAGCATGGATACAGGGGGGAATATATTTTATCATTTGAAAAATGCGGATTTTTACGGAAAGTCGCTTGAA GGATTCATGCAGGACGTTAAGGCTGGCGAGTCTGGTGAGATGGAATTTACATTGGATAACCGCCAGTATTACCTTGTGTA TGTTCCTGTTGGTTTTGATAACTGGGGACTTATATCAATGGTTCCTATAAGAATTGCAAATTCAAGCATTGTTGCAGTAC AACAGAGAACAGTGTGGATGGCTATGCAGATAGGTGGATTGTTTTTTATAGTGGCTGTTGTTGTATTGTATACATACTAC AGAAGATATATCAGTGAAAAGAATCACGAAATATCAAGGCGGGATATTTTATTTTCTATTATGGCAAAAAATCTTGATGA TGTATATATTATGCTTTCATGGGGCGATTGGCGTAAACTTTATGTCAGCAGAAATATTGAGAGAGTTCTGGGATTAAAAA ATGATGAATATTCAGAACTTACAGATGAGTTTAAGAAACTTGATAAGAAGGGGGAAATCCCGGATTGGAATGATATTACC GGACTAGATATAGGAGAATCTGTAGTCAATGAATACTGGATAAAGCCTGCTGATTCAAATGAGTACAGATTATTTAAACA GGGCTGTTATCATATGGATAAGGATGGGGATGATGTCCTTGTCGTAATTATTTCTGATAGAACCTATGAGCAGCAGATAA GAGGACATATGGAGGATGCACTTCATACAGCAGAAGCTGCAAATCTTGCTAAAAGCCAGTTTCTTGCTAATATGAGCCAT GATATAAGGACACCAATGAATGCCATTGTGGGATTTTCGCAGTTATTATTAAGACATGAAAAGAACCCTGATAAAGTAAA AAAATATGCTGAGAAGATAGTGATATCAAGCCAGCACTTGTTAAACCTTATAAATGATGTTCTCGATATGAGTAAAATAG AATCAGGGAATACTACTCTTAATTTAAGTGATGTAAATATTGCTGATATTGTTCAGGAAATAGATAACATTATAAGACCA CAGGCAAAACAGAAAAAGCAGACACTTATAATCAGCTCAGATAATGTAGAATATGGCTGGATTAAAACAGATAAACTGCG TTTAAACCAGATACTCCTGAATATCTTATCAAATGCCGTAAAATATACGCCAGAGTATGGGATGATAACATTTGAAATAA GAGGGATGAATCATACAGGAAGTCAGTTTGCAAAGTATAAGTTTAAAATATCTGATAACGGAATAGGAATGAGCGATGGT TATATTAAAGAGATATTTAAACCTTTTACAAGGGAAGATAATAATGTGACTGATAATGTGCAGGGAACAGGACTTGGAAT GCCTATAACAAAGAACCTTATTGACCTTATGGGAGGAACTATAAAGGTTAAAAGCAAGAAAGGTGAAGGAAGTACATTTG AAGTTACAATGGAATTCATGATTTCTGAAAAGAAAACAAATATTCAGAGTGGTACAGGGTATGCAGCCAATATGACACAA GAAGATATTAAACAGAGCAGGGTGCTTGAGGGAAAGAAATTCCTTGTGGCAGAGGACAATGTTATTAATGCGGAGATGAT GAGAGAATTTTTAAAGTCCGAGGGGGCATTATGTGACATTGCAAAGGATGGAATGGCAGCCGTGAATGCATTTAGTCATT CGGTAAAAGGTCAGTATGACTTGATATTTATGGATGTCCAAATGCCTAATATGGATGGATATGAGGCAACAAAAGCCATA AGACAGCTCAAGCATCCTGATGCAAAGGATATACCGATTGTTGCAATGACAGCAGATGCATTTTCAAATGATGTAAAGGC AGCTTTTGATGCTGGAATGAATGCACATATATCAAAACCTGTTGATGCAGAGCGCATAAGAAACGTGGCTGCAAATTTTA CATAA
Upstream 100 bases:
>100_bases ATATATAGTTCATACAACTGGTGTGTCAGAGCAATGGCTGAAGTATTTTATAGATGGCGGTAAACTACCAAAACCACAGG CATATATAGAAAAGAGCTGA
Downstream 100 bases:
>100_bases ATTTTACATAACTTACATAATACATTTTACAATGCTCATTTAGAATACACATGATATGTGAAAAAGTCGTTCAAAAAGGA GCTTATGTAAAATGAATATT
Product: two-component system sensor kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 854; Mature: 853
Protein sequence:
>854_residues MTRGKEISQMKKNENGIYFFAAVGVAIAVFMCVGIILFNYSVNVKKELYETSSRNLNEVYKQVSEKFLQITGQQWKLLRM TGDFINEADGNEEDIRSFLNEWKNEWHYTEFYFVDDDCNYLSSAGRRGYLELGNTWKSLVINRESVIVDGSNPGSDEVMF FAIPVDPAYINGFSYSSIAVSYNTDSINRELGIKAFAKDTSSYIVYANGDIVLKSEGSMDTGGNIFYHLKNADFYGKSLE GFMQDVKAGESGEMEFTLDNRQYYLVYVPVGFDNWGLISMVPIRIANSSIVAVQQRTVWMAMQIGGLFFIVAVVVLYTYY RRYISEKNHEISRRDILFSIMAKNLDDVYIMLSWGDWRKLYVSRNIERVLGLKNDEYSELTDEFKKLDKKGEIPDWNDIT GLDIGESVVNEYWIKPADSNEYRLFKQGCYHMDKDGDDVLVVIISDRTYEQQIRGHMEDALHTAEAANLAKSQFLANMSH DIRTPMNAIVGFSQLLLRHEKNPDKVKKYAEKIVISSQHLLNLINDVLDMSKIESGNTTLNLSDVNIADIVQEIDNIIRP QAKQKKQTLIISSDNVEYGWIKTDKLRLNQILLNILSNAVKYTPEYGMITFEIRGMNHTGSQFAKYKFKISDNGIGMSDG YIKEIFKPFTREDNNVTDNVQGTGLGMPITKNLIDLMGGTIKVKSKKGEGSTFEVTMEFMISEKKTNIQSGTGYAANMTQ EDIKQSRVLEGKKFLVAEDNVINAEMMREFLKSEGALCDIAKDGMAAVNAFSHSVKGQYDLIFMDVQMPNMDGYEATKAI RQLKHPDAKDIPIVAMTADAFSNDVKAAFDAGMNAHISKPVDAERIRNVAANFT
Sequences:
>Translated_854_residues MTRGKEISQMKKNENGIYFFAAVGVAIAVFMCVGIILFNYSVNVKKELYETSSRNLNEVYKQVSEKFLQITGQQWKLLRM TGDFINEADGNEEDIRSFLNEWKNEWHYTEFYFVDDDCNYLSSAGRRGYLELGNTWKSLVINRESVIVDGSNPGSDEVMF FAIPVDPAYINGFSYSSIAVSYNTDSINRELGIKAFAKDTSSYIVYANGDIVLKSEGSMDTGGNIFYHLKNADFYGKSLE GFMQDVKAGESGEMEFTLDNRQYYLVYVPVGFDNWGLISMVPIRIANSSIVAVQQRTVWMAMQIGGLFFIVAVVVLYTYY RRYISEKNHEISRRDILFSIMAKNLDDVYIMLSWGDWRKLYVSRNIERVLGLKNDEYSELTDEFKKLDKKGEIPDWNDIT GLDIGESVVNEYWIKPADSNEYRLFKQGCYHMDKDGDDVLVVIISDRTYEQQIRGHMEDALHTAEAANLAKSQFLANMSH DIRTPMNAIVGFSQLLLRHEKNPDKVKKYAEKIVISSQHLLNLINDVLDMSKIESGNTTLNLSDVNIADIVQEIDNIIRP QAKQKKQTLIISSDNVEYGWIKTDKLRLNQILLNILSNAVKYTPEYGMITFEIRGMNHTGSQFAKYKFKISDNGIGMSDG YIKEIFKPFTREDNNVTDNVQGTGLGMPITKNLIDLMGGTIKVKSKKGEGSTFEVTMEFMISEKKTNIQSGTGYAANMTQ EDIKQSRVLEGKKFLVAEDNVINAEMMREFLKSEGALCDIAKDGMAAVNAFSHSVKGQYDLIFMDVQMPNMDGYEATKAI RQLKHPDAKDIPIVAMTADAFSNDVKAAFDAGMNAHISKPVDAERIRNVAANFT >Mature_853_residues TRGKEISQMKKNENGIYFFAAVGVAIAVFMCVGIILFNYSVNVKKELYETSSRNLNEVYKQVSEKFLQITGQQWKLLRMT GDFINEADGNEEDIRSFLNEWKNEWHYTEFYFVDDDCNYLSSAGRRGYLELGNTWKSLVINRESVIVDGSNPGSDEVMFF AIPVDPAYINGFSYSSIAVSYNTDSINRELGIKAFAKDTSSYIVYANGDIVLKSEGSMDTGGNIFYHLKNADFYGKSLEG FMQDVKAGESGEMEFTLDNRQYYLVYVPVGFDNWGLISMVPIRIANSSIVAVQQRTVWMAMQIGGLFFIVAVVVLYTYYR RYISEKNHEISRRDILFSIMAKNLDDVYIMLSWGDWRKLYVSRNIERVLGLKNDEYSELTDEFKKLDKKGEIPDWNDITG LDIGESVVNEYWIKPADSNEYRLFKQGCYHMDKDGDDVLVVIISDRTYEQQIRGHMEDALHTAEAANLAKSQFLANMSHD IRTPMNAIVGFSQLLLRHEKNPDKVKKYAEKIVISSQHLLNLINDVLDMSKIESGNTTLNLSDVNIADIVQEIDNIIRPQ AKQKKQTLIISSDNVEYGWIKTDKLRLNQILLNILSNAVKYTPEYGMITFEIRGMNHTGSQFAKYKFKISDNGIGMSDGY IKEIFKPFTREDNNVTDNVQGTGLGMPITKNLIDLMGGTIKVKSKKGEGSTFEVTMEFMISEKKTNIQSGTGYAANMTQE DIKQSRVLEGKKFLVAEDNVINAEMMREFLKSEGALCDIAKDGMAAVNAFSHSVKGQYDLIFMDVQMPNMDGYEATKAIR QLKHPDAKDIPIVAMTADAFSNDVKAAFDAGMNAHISKPVDAERIRNVAANFT
Specific function: At low cell density, in absence of autoinducer has a kinase activity, and autophosphorylates on a histidine residue. The phosphoryl group is then transferred to an aspartate residue in the response regulator domain. The phosphoryl group is transferred to
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788713, Length=387, Percent_Identity=33.3333333333333, Blast_Score=179, Evalue=9e-46, Organism=Escherichia coli, GI48994928, Length=405, Percent_Identity=30.1234567901235, Blast_Score=175, Evalue=1e-44, Organism=Escherichia coli, GI1789149, Length=399, Percent_Identity=28.8220551378446, Blast_Score=134, Evalue=3e-32, Organism=Escherichia coli, GI87081816, Length=502, Percent_Identity=24.7011952191235, Blast_Score=130, Evalue=3e-31, Organism=Escherichia coli, GI145693157, Length=325, Percent_Identity=28.6153846153846, Blast_Score=127, Evalue=4e-30, Organism=Escherichia coli, GI1786912, Length=235, Percent_Identity=29.3617021276596, Blast_Score=95, Evalue=2e-20, Organism=Escherichia coli, GI1790436, Length=237, Percent_Identity=25.3164556962025, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1788549, Length=260, Percent_Identity=28.8461538461538, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1786600, Length=235, Percent_Identity=27.2340425531915, Blast_Score=90, Evalue=6e-19, Organism=Escherichia coli, GI1790861, Length=219, Percent_Identity=23.2876712328767, Blast_Score=73, Evalue=7e-14, Organism=Escherichia coli, GI1786783, Length=231, Percent_Identity=22.5108225108225, Blast_Score=70, Evalue=7e-13, Organism=Escherichia coli, GI1788393, Length=226, Percent_Identity=24.3362831858407, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI87082128, Length=229, Percent_Identity=22.707423580786, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1788279, Length=238, Percent_Identity=22.6890756302521, Blast_Score=63, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6322044, Length=128, Percent_Identity=37.5, Blast_Score=81, Evalue=9e-16, Organism=Saccharomyces cerevisiae, GI6322000, Length=111, Percent_Identity=31.5315315315315, Blast_Score=72, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR015387 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 - ProDom: PD142495 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF09308 LuxQ-periplasm; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 96770; Mature: 96639
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRGKEISQMKKNENGIYFFAAVGVAIAVFMCVGIILFNYSVNVKKELYETSSRNLNEVY CCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHH KQVSEKFLQITGQQWKLLRMTGDFINEADGNEEDIRSFLNEWKNEWHYTEFYFVDDDCNY HHHHHHHHHHCCCCEEEEEECCHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCHH LSSAGRRGYLELGNTWKSLVINRESVIVDGSNPGSDEVMFFAIPVDPAYINGFSYSSIAV HHHCCCCCEEECCCCHHHHEEECCEEEEECCCCCCCCEEEEEEECCHHHCCCCCCCEEEE SYNTDSINRELGIKAFAKDTSSYIVYANGDIVLKSEGSMDTGGNIFYHLKNADFYGKSLE EECCCCCCHHHCCEEEECCCCCEEEEECCCEEEECCCCCCCCCCEEEEEECCCCCCHHHH GFMQDVKAGESGEMEFTLDNRQYYLVYVPVGFDNWGLISMVPIRIANSSIVAVQQRTVWM HHHHHHHCCCCCCEEEEECCCEEEEEEEEECCCCCCCEEEEEEEECCCEEEEEEHHHEEE AMQIGGLFFIVAVVVLYTYYRRYISEKNHEISRRDILFSIMAKNLDDVYIMLSWGDWRKL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHH YVSRNIERVLGLKNDEYSELTDEFKKLDKKGEIPDWNDITGLDIGESVVNEYWIKPADSN HHHCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC EYRLFKQGCYHMDKDGDDVLVVIISDRTYEQQIRGHMEDALHTAEAANLAKSQFLANMSH CHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIRTPMNAIVGFSQLLLRHEKNPDKVKKYAEKIVISSQHLLNLINDVLDMSKIESGNTTL HHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEE NLSDVNIADIVQEIDNIIRPQAKQKKQTLIISSDNVEYGWIKTDKLRLNQILLNILSNAV EECCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHH KYTPEYGMITFEIRGMNHTGSQFAKYKFKISDNGIGMSDGYIKEIFKPFTREDNNVTDNV HCCCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCC QGTGLGMPITKNLIDLMGGTIKVKSKKGEGSTFEVTMEFMISEKKTNIQSGTGYAANMTQ CCCCCCCCHHHHHHHHCCCEEEEEECCCCCCEEEEEEEEEHHHHHCCCCCCCCCCCCCCH EDIKQSRVLEGKKFLVAEDNVINAEMMREFLKSEGALCDIAKDGMAAVNAFSHSVKGQYD HHHHHHHHCCCCEEEEECCCEECHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCEE LIFMDVQMPNMDGYEATKAIRQLKHPDAKDIPIVAMTADAFSNDVKAAFDAGMNAHISKP EEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCHHCCCHHHHHHCCCCCCCCCC VDAERIRNVAANFT CCHHHHHHHHCCCC >Mature Secondary Structure TRGKEISQMKKNENGIYFFAAVGVAIAVFMCVGIILFNYSVNVKKELYETSSRNLNEVY CCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHH KQVSEKFLQITGQQWKLLRMTGDFINEADGNEEDIRSFLNEWKNEWHYTEFYFVDDDCNY HHHHHHHHHHCCCCEEEEEECCHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCHH LSSAGRRGYLELGNTWKSLVINRESVIVDGSNPGSDEVMFFAIPVDPAYINGFSYSSIAV HHHCCCCCEEECCCCHHHHEEECCEEEEECCCCCCCCEEEEEEECCHHHCCCCCCCEEEE SYNTDSINRELGIKAFAKDTSSYIVYANGDIVLKSEGSMDTGGNIFYHLKNADFYGKSLE EECCCCCCHHHCCEEEECCCCCEEEEECCCEEEECCCCCCCCCCEEEEEECCCCCCHHHH GFMQDVKAGESGEMEFTLDNRQYYLVYVPVGFDNWGLISMVPIRIANSSIVAVQQRTVWM HHHHHHHCCCCCCEEEEECCCEEEEEEEEECCCCCCCEEEEEEEECCCEEEEEEHHHEEE AMQIGGLFFIVAVVVLYTYYRRYISEKNHEISRRDILFSIMAKNLDDVYIMLSWGDWRKL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHH YVSRNIERVLGLKNDEYSELTDEFKKLDKKGEIPDWNDITGLDIGESVVNEYWIKPADSN HHHCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC EYRLFKQGCYHMDKDGDDVLVVIISDRTYEQQIRGHMEDALHTAEAANLAKSQFLANMSH CHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIRTPMNAIVGFSQLLLRHEKNPDKVKKYAEKIVISSQHLLNLINDVLDMSKIESGNTTL HHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEE NLSDVNIADIVQEIDNIIRPQAKQKKQTLIISSDNVEYGWIKTDKLRLNQILLNILSNAV EECCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHH KYTPEYGMITFEIRGMNHTGSQFAKYKFKISDNGIGMSDGYIKEIFKPFTREDNNVTDNV HCCCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCC QGTGLGMPITKNLIDLMGGTIKVKSKKGEGSTFEVTMEFMISEKKTNIQSGTGYAANMTQ CCCCCCCCHHHHHHHHCCCEEEEEECCCCCCEEEEEEEEEHHHHHCCCCCCCCCCCCCCH EDIKQSRVLEGKKFLVAEDNVINAEMMREFLKSEGALCDIAKDGMAAVNAFSHSVKGQYD HHHHHHHHCCCCEEEEECCCEECHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCEE LIFMDVQMPNMDGYEATKAIRQLKHPDAKDIPIVAMTADAFSNDVKAAFDAGMNAHISKP EEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCHHCCCHHHHHHCCCCCCCCCC VDAERIRNVAANFT CCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]