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The map label for this gene is trkA [H]

Identifier: 238917501

GI number: 238917501

Start: 1632558

End: 1633949

Strand: Reverse

Name: trkA [H]

Synonym: EUBELI_01579

Alternate gene names: 238917501

Gene position: 1633949-1632558 (Counterclockwise)

Preceding gene: 238917502

Following gene: 238917500

Centisome position: 76.2

GC content: 39.94

Gene sequence:

>1392_bases
ATGTTTGGGAATGTCAAGTCCAGAAAGAACGGACTTAATATTATAGTTGTAGGTGGCGGTAAGGTTGGTGCCACTCTTGT
TGAGAGACTCAGCAGGGAGAACCATGACATTACTCTTATTGATAAGAACAGGGTTAAGCTTGATGCCATAACAAGTGCAT
ATGATGTTATGGGAGTTGAGGGCAATGGAGCCAGTTTTGCAGTTCAGAAGGAGGCAGGTATTGACTCAGCTGACCTTCTT
ATTTCAGTAACAGATTCTGATGAGTTGAATCTTTTATGCTGTACACTTGCAAAGAGAGCTGGCAGATGTGAGGCAATTGC
AAGAGTAAGAACACCTGAATACAGTCAGGAAGCTGCATTTTTAAGAGACAGATTAGGTCTGGCAATGATTATTAATCCGG
AATTCGAGGCTGCAAGTGAGATAGCACGTGTGCTTTATATGCCTACAGCACTTGAGATTGGAACATTTGCACATGGACAG
GCAGAGATGATTAAGATAAAAGTCCCTGAGGGTAACCAGATGTGTGACCATACCCTTGCGGAGATATCTAAGGCTTCATC
ATCTAAGGTTCTTATATGTGCAGTTGAGAGGGATGGTGAGGTGTTCATTCCATCGGGACATTTTATTATAAGGGCAGATG
ATAAGTTATCTTTCATTGCATCAAGAAAGAATGCAAGGACATTTCTTGCAAGTGTAGGTTTTCAGACACATCAGGTCAAG
AGTACCATGATTGTCGGAGGTGGAAGAGTTGCATATTATCTTGCAAAACAGCTCCTTAATATGGGAATTGATGTAAAGAT
TATTGAGAATGACAAGGAACGCGCGTTAAAGTTAAGCGAGGAGCTGCCGGGAGCTGTTATTATCAATGGTGATGGTACTG
ACGAGAGCCTTTTAAGAGAAGAGGGGATTGAGTATGTTGAGAGCTTTGTTCCTCTTACAGGGATTGATGAAGAGAATGTA
ATGCTTACTCTGTATGCAAGAAAAGTATCTGAAGCCAAATGTATTACGAAAATAACAAGAATGGGATTCAGCAGTGTTAT
TAACAGCCTTGATCTTGGCAGTGTGATTTATCCAAGATATATAACATCAGAAGCTATCATTGCTTATGTAAGAGCTAAGA
AGGAGTCTATGGGAAGCAATAACATACAGACCTTGTATCATTTGTTTGACCAGAAGGCAGAAGCTATAGAGTTTAATGTT
GATAAAGAATCAGGAGTTACAGGCAAGCAGTTTATGGAACTTAAGCTGAAGGATAATCTGCTTATAGCACTTATTAACCG
TAATGGTAAGATTATTATTCCAAGTGGTACTGACAGCCTTATGGTTGGAGATACTGTGGTTATTGTAACAACTCATACAG
GGTTTGATGCTATAACTGATATTCTTAGATAG

Upstream 100 bases:

>100_bases
ATATAAAGGTACAGCAGTCTGATTTGGAACTGCTTGAAGAATTAAAAGAAATGGGTAGATAGTTTGCTTCGCAAAACAAT
GTGGCAAAAGGGGGATTGGA

Downstream 100 bases:

>100_bases
GAAAGGCTGGGAACATTGATATGAACAGTTCTATAGTAAGATATATTCTTGGACATGTTTTAAAGATAGAAGCGGCTCTT
ATGGTCATTCCTGTGATTGT

Product: trk system potassium uptake protein TrkA

Products: NA

Alternate protein names: K(+)-uptake protein trkA [H]

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MFGNVKSRKNGLNIIVVGGGKVGATLVERLSRENHDITLIDKNRVKLDAITSAYDVMGVEGNGASFAVQKEAGIDSADLL
ISVTDSDELNLLCCTLAKRAGRCEAIARVRTPEYSQEAAFLRDRLGLAMIINPEFEAASEIARVLYMPTALEIGTFAHGQ
AEMIKIKVPEGNQMCDHTLAEISKASSSKVLICAVERDGEVFIPSGHFIIRADDKLSFIASRKNARTFLASVGFQTHQVK
STMIVGGGRVAYYLAKQLLNMGIDVKIIENDKERALKLSEELPGAVIINGDGTDESLLREEGIEYVESFVPLTGIDEENV
MLTLYARKVSEAKCITKITRMGFSSVINSLDLGSVIYPRYITSEAIIAYVRAKKESMGSNNIQTLYHLFDQKAEAIEFNV
DKESGVTGKQFMELKLKDNLLIALINRNGKIIIPSGTDSLMVGDTVVIVTTHTGFDAITDILR

Sequences:

>Translated_463_residues
MFGNVKSRKNGLNIIVVGGGKVGATLVERLSRENHDITLIDKNRVKLDAITSAYDVMGVEGNGASFAVQKEAGIDSADLL
ISVTDSDELNLLCCTLAKRAGRCEAIARVRTPEYSQEAAFLRDRLGLAMIINPEFEAASEIARVLYMPTALEIGTFAHGQ
AEMIKIKVPEGNQMCDHTLAEISKASSSKVLICAVERDGEVFIPSGHFIIRADDKLSFIASRKNARTFLASVGFQTHQVK
STMIVGGGRVAYYLAKQLLNMGIDVKIIENDKERALKLSEELPGAVIINGDGTDESLLREEGIEYVESFVPLTGIDEENV
MLTLYARKVSEAKCITKITRMGFSSVINSLDLGSVIYPRYITSEAIIAYVRAKKESMGSNNIQTLYHLFDQKAEAIEFNV
DKESGVTGKQFMELKLKDNLLIALINRNGKIIIPSGTDSLMVGDTVVIVTTHTGFDAITDILR
>Mature_463_residues
MFGNVKSRKNGLNIIVVGGGKVGATLVERLSRENHDITLIDKNRVKLDAITSAYDVMGVEGNGASFAVQKEAGIDSADLL
ISVTDSDELNLLCCTLAKRAGRCEAIARVRTPEYSQEAAFLRDRLGLAMIINPEFEAASEIARVLYMPTALEIGTFAHGQ
AEMIKIKVPEGNQMCDHTLAEISKASSSKVLICAVERDGEVFIPSGHFIIRADDKLSFIASRKNARTFLASVGFQTHQVK
STMIVGGGRVAYYLAKQLLNMGIDVKIIENDKERALKLSEELPGAVIINGDGTDESLLREEGIEYVESFVPLTGIDEENV
MLTLYARKVSEAKCITKITRMGFSSVINSLDLGSVIYPRYITSEAIIAYVRAKKESMGSNNIQTLYHLFDQKAEAIEFNV
DKESGVTGKQFMELKLKDNLLIALINRNGKIIIPSGTDSLMVGDTVVIVTTHTGFDAITDILR

Specific function: Part of a potassium transport system [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK N-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1789685, Length=456, Percent_Identity=30.2631578947368, Blast_Score=210, Evalue=2e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 50608; Mature: 50608

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGNVKSRKNGLNIIVVGGGKVGATLVERLSRENHDITLIDKNRVKLDAITSAYDVMGVE
CCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCEEEEEEHHHHHEEEEC
GNGASFAVQKEAGIDSADLLISVTDSDELNLLCCTLAKRAGRCEAIARVRTPEYSQEAAF
CCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEHHHHCCCCHHHHHHCCCCCCCHHHHH
LRDRLGLAMIINPEFEAASEIARVLYMPTALEIGTFAHGQAEMIKIKVPEGNQMCDHTLA
HHHCCCEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEECCCCCCHHHHHHH
EISKASSSKVLICAVERDGEVFIPSGHFIIRADDKLSFIASRKNARTFLASVGFQTHQVK
HHHHCCCCEEEEEEEECCCCEEEECCCEEEEECCCEEEECCCCCHHHHHHHCCCCCEEEE
STMIVGGGRVAYYLAKQLLNMGIDVKIIENDKERALKLSEELPGAVIINGDGTDESLLRE
EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCEEEECCCCCCHHHHHH
EGIEYVESFVPLTGIDEENVMLTLYARKVSEAKCITKITRMGFSSVINSLDLGSVIYPRY
HHHHHHHHCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHH
ITSEAIIAYVRAKKESMGSNNIQTLYHLFDQKAEAIEFNVDKESGVTGKQFMELKLKDNL
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHEEEEEECCCE
LIALINRNGKIIIPSGTDSLMVGDTVVIVTTHTGFDAITDILR
EEEEECCCCEEEEECCCCCEEECCEEEEEEECCCHHHHHHHHC
>Mature Secondary Structure
MFGNVKSRKNGLNIIVVGGGKVGATLVERLSRENHDITLIDKNRVKLDAITSAYDVMGVE
CCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCEEEEEEHHHHHEEEEC
GNGASFAVQKEAGIDSADLLISVTDSDELNLLCCTLAKRAGRCEAIARVRTPEYSQEAAF
CCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEHHHHCCCCHHHHHHCCCCCCCHHHHH
LRDRLGLAMIINPEFEAASEIARVLYMPTALEIGTFAHGQAEMIKIKVPEGNQMCDHTLA
HHHCCCEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEECCCCCCHHHHHHH
EISKASSSKVLICAVERDGEVFIPSGHFIIRADDKLSFIASRKNARTFLASVGFQTHQVK
HHHHCCCCEEEEEEEECCCCEEEECCCEEEEECCCEEEECCCCCHHHHHHHCCCCCEEEE
STMIVGGGRVAYYLAKQLLNMGIDVKIIENDKERALKLSEELPGAVIINGDGTDESLLRE
EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCEEEECCCCCCHHHHHH
EGIEYVESFVPLTGIDEENVMLTLYARKVSEAKCITKITRMGFSSVINSLDLGSVIYPRY
HHHHHHHHCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHH
ITSEAIIAYVRAKKESMGSNNIQTLYHLFDQKAEAIEFNVDKESGVTGKQFMELKLKDNL
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHEEEEEECCCE
LIALINRNGKIIIPSGTDSLMVGDTVVIVTTHTGFDAITDILR
EEEEECCCCEEEEECCCCCEEECCEEEEEEECCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]