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The map label for this gene is yaaJ [C]

Identifier: 238917398

GI number: 238917398

Start: 1531821

End: 1533239

Strand: Direct

Name: yaaJ [C]

Synonym: EUBELI_01476

Alternate gene names: 238917398

Gene position: 1531821-1533239 (Clockwise)

Preceding gene: 238917396

Following gene: 238917399

Centisome position: 71.44

GC content: 39.82

Gene sequence:

>1419_bases
ATGTTTAGTAAAATCAATACTATTCTCGTTACTATTGACGCATATGTCTGGGGAATTCCACTCATTGTCCTTATACTTTC
AGTTGGTCTGTTTCTTACTATCAGACTTAAGGGTGTTCAGTTTACTAATCTTGGACGTGCTTTTAAGTACATTTTCAAAG
ACGAAACTGATGGAAAGCATGGTGAAGTGAGCAGTTTCGCAGCACTATGTACAGCACTTTCAGCAACAATCGGTACAGGT
AATATCGTAGGTGTTGCTACTGCTATTGTCTCAGGCGGTCCTGGTGCATTATTCTGGATGTGGCTTGCTGCCTTAGTTGG
TACTGCTACCAAGTACGCAGAGTGTCTCTTAGCAGTTAAGTTCAGACAGGTTGACGAAGACGGTCATGTTGTTGGTGGTC
CTTTTAACTACATTGAACATGGTATGGGACCTAAGTGGAAATGGCTTGCCAAGATATTTGCTTTCTTTGGTATAGGCGTT
GGTCTTTTAGGAATTGGTACATTTACACAGGTGAATGGAATCTCTTCTGCTGTTAATAATTTCTTTGATTCTAACAACGC
ATGGACTGTTTCATTATTTGGAAGAACATATTCATGGACTGTAGTTATAAGCTGTCTTATCCTTACATTCTGTGTTGCTC
TTGTTCTTATTGGTGGAATCCAGAGAATTTCTAAAGTTGCTCAGGTTATTGTTCCTTTCATGGCTGCAACATATTTTTTA
GCAGGTATTCTTATTATTTTATTTAATATTACAGATGTTCCTGCTGCCATCCTTACAATTGTGCAGAGTGCATTTGGTCT
TAAGGCCGCTGCTGGTGGTGCCCTTGGTGCCATGGTTGTAGCTATGCAGAAGGGTATTGCAAGAGGTATCTTCTCTAATG
AGGCCGGTCTTGGTAGTGCACCTATTGCCGCTGCCGCTGCCCGTACCAATGAACCTGTACGTCAGGGTCTTGTATCTATG
ACAGCTACTTTTATTGATACTATTATCATCTGTTCAATTACAGGTATTGCAATTGTTCTTACAGGAGCTTACGATATGGG
ACTTGAAGGTGTTGCAGTAACAACTAAAGCATTCCAGTTAGGACTTCCATTCCCTGATGGAGTTGCTTCATTTATTCTTA
TGTTATGTCTCGTATTCTTTGCATTTACAACTATTCTTGGCTGGGATTATTATTCTGAGCGCTGCCTTGAATACCTTACT
AATGGTAAGAAGAAATGCATCAAGGCATACAGATGGATATATATCCTCTGCGTATTCATCGGCCCTTACATGACTGTATC
TGCCGTATGGACAATTGCAGATATATTTAACGGTCTTATGGCTATTCCTAACCTTATAGCACTTGTAGCATTAAGCGGTG
TAGTTGCTAAGGAAACTAAAGATTATCTTGACAGAATCAAGAAAAAAGAGATTGATTAA

Upstream 100 bases:

>100_bases
AATTATTTATTATATTAGGAAATAACAGTATTCAATTGAAAAAAATGTTGTTTTATGATAAAATTTATCTTAATTTTTAT
AAAAAGGGAGAATACATAAT

Downstream 100 bases:

>100_bases
TTAAGCATTAACTGCTTATGCGTAAACATAAGCCCCATTCTGGATTAGTCCAGAATGGGGCATTTTGTATATATCTTTAT
TCTGTTATAGTACTATGAGG

Product: AGCS family alanine or glycine:cation symporter

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MFSKINTILVTIDAYVWGIPLIVLILSVGLFLTIRLKGVQFTNLGRAFKYIFKDETDGKHGEVSSFAALCTALSATIGTG
NIVGVATAIVSGGPGALFWMWLAALVGTATKYAECLLAVKFRQVDEDGHVVGGPFNYIEHGMGPKWKWLAKIFAFFGIGV
GLLGIGTFTQVNGISSAVNNFFDSNNAWTVSLFGRTYSWTVVISCLILTFCVALVLIGGIQRISKVAQVIVPFMAATYFL
AGILIILFNITDVPAAILTIVQSAFGLKAAAGGALGAMVVAMQKGIARGIFSNEAGLGSAPIAAAAARTNEPVRQGLVSM
TATFIDTIIICSITGIAIVLTGAYDMGLEGVAVTTKAFQLGLPFPDGVASFILMLCLVFFAFTTILGWDYYSERCLEYLT
NGKKKCIKAYRWIYILCVFIGPYMTVSAVWTIADIFNGLMAIPNLIALVALSGVVAKETKDYLDRIKKKEID

Sequences:

>Translated_472_residues
MFSKINTILVTIDAYVWGIPLIVLILSVGLFLTIRLKGVQFTNLGRAFKYIFKDETDGKHGEVSSFAALCTALSATIGTG
NIVGVATAIVSGGPGALFWMWLAALVGTATKYAECLLAVKFRQVDEDGHVVGGPFNYIEHGMGPKWKWLAKIFAFFGIGV
GLLGIGTFTQVNGISSAVNNFFDSNNAWTVSLFGRTYSWTVVISCLILTFCVALVLIGGIQRISKVAQVIVPFMAATYFL
AGILIILFNITDVPAAILTIVQSAFGLKAAAGGALGAMVVAMQKGIARGIFSNEAGLGSAPIAAAAARTNEPVRQGLVSM
TATFIDTIIICSITGIAIVLTGAYDMGLEGVAVTTKAFQLGLPFPDGVASFILMLCLVFFAFTTILGWDYYSERCLEYLT
NGKKKCIKAYRWIYILCVFIGPYMTVSAVWTIADIFNGLMAIPNLIALVALSGVVAKETKDYLDRIKKKEID
>Mature_472_residues
MFSKINTILVTIDAYVWGIPLIVLILSVGLFLTIRLKGVQFTNLGRAFKYIFKDETDGKHGEVSSFAALCTALSATIGTG
NIVGVATAIVSGGPGALFWMWLAALVGTATKYAECLLAVKFRQVDEDGHVVGGPFNYIEHGMGPKWKWLAKIFAFFGIGV
GLLGIGTFTQVNGISSAVNNFFDSNNAWTVSLFGRTYSWTVVISCLILTFCVALVLIGGIQRISKVAQVIVPFMAATYFL
AGILIILFNITDVPAAILTIVQSAFGLKAAAGGALGAMVVAMQKGIARGIFSNEAGLGSAPIAAAAARTNEPVRQGLVSM
TATFIDTIIICSITGIAIVLTGAYDMGLEGVAVTTKAFQLGLPFPDGVASFILMLCLVFFAFTTILGWDYYSERCLEYLT
NGKKKCIKAYRWIYILCVFIGPYMTVSAVWTIADIFNGLMAIPNLIALVALSGVVAKETKDYLDRIKKKEID

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=472, Percent_Identity=35.1694915254237, Blast_Score=233, Evalue=1e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 50552; Mature: 50552

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSKINTILVTIDAYVWGIPLIVLILSVGLFLTIRLKGVQFTNLGRAFKYIFKDETDGKH
CCCCCEEHEEEHHHHHHHHHHHHHHHHHHHHHEEEECCCEEHHHHHHHHHHHCCCCCCCC
GEVSSFAALCTALSATIGTGNIVGVATAIVSGGPGALFWMWLAALVGTATKYAECLLAVK
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FRQVDEDGHVVGGPFNYIEHGMGPKWKWLAKIFAFFGIGVGLLGIGTFTQVNGISSAVNN
HHHCCCCCCEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
FFDSNNAWTVSLFGRTYSWTVVISCLILTFCVALVLIGGIQRISKVAQVIVPFMAATYFL
HHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGILIILFNITDVPAAILTIVQSAFGLKAAAGGALGAMVVAMQKGIARGIFSNEAGLGSA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PIAAAAARTNEPVRQGLVSMTATFIDTIIICSITGIAIVLTGAYDMGLEGVAVTTKAFQL
CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHCCCCCCEEEHHHHEE
GLPFPDGVASFILMLCLVFFAFTTILGWDYYSERCLEYLTNGKKKCIKAYRWIYILCVFI
CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
GPYMTVSAVWTIADIFNGLMAIPNLIALVALSGVVAKETKDYLDRIKKKEID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFSKINTILVTIDAYVWGIPLIVLILSVGLFLTIRLKGVQFTNLGRAFKYIFKDETDGKH
CCCCCEEHEEEHHHHHHHHHHHHHHHHHHHHHEEEECCCEEHHHHHHHHHHHCCCCCCCC
GEVSSFAALCTALSATIGTGNIVGVATAIVSGGPGALFWMWLAALVGTATKYAECLLAVK
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FRQVDEDGHVVGGPFNYIEHGMGPKWKWLAKIFAFFGIGVGLLGIGTFTQVNGISSAVNN
HHHCCCCCCEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
FFDSNNAWTVSLFGRTYSWTVVISCLILTFCVALVLIGGIQRISKVAQVIVPFMAATYFL
HHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGILIILFNITDVPAAILTIVQSAFGLKAAAGGALGAMVVAMQKGIARGIFSNEAGLGSA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PIAAAAARTNEPVRQGLVSMTATFIDTIIICSITGIAIVLTGAYDMGLEGVAVTTKAFQL
CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHCCCCCCEEEHHHHEE
GLPFPDGVASFILMLCLVFFAFTTILGWDYYSERCLEYLTNGKKKCIKAYRWIYILCVFI
CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
GPYMTVSAVWTIADIFNGLMAIPNLIALVALSGVVAKETKDYLDRIKKKEID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]