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The map label for this gene is ygfT [C]

Identifier: 238917328

GI number: 238917328

Start: 1448195

End: 1449664

Strand: Direct

Name: ygfT [C]

Synonym: EUBELI_01405

Alternate gene names: 238917328

Gene position: 1448195-1449664 (Clockwise)

Preceding gene: 238917318

Following gene: 238917343

Centisome position: 67.54

GC content: 43.54

Gene sequence:

>1470_bases
ATGTTATCTAATGATGCTACTATTCAGAATATCAAGCATGAAATCCTGTATGAAGTTGCCAAGCTCGCATATGCAGGAAG
GTTTGAAGAAGAAAAGGACGAACTGGCATACAAGATGTTTCCCGGTCCTAAAGCAAGATTCCGCTGTTGTGTATATAAAG
AAAGAGAAATCGCAAGACAGCGAATCCGCCTTGCAGAAGGCAAATGTCCAACAGAAAGTGACCATCCGGGTGCCAATAAC
ATAATCCAGGTAATTGAAGCCGCATGTGCCGACTGTCCACTTTCTCACTATATCGTAACTGATAATTGTAGAAAATGTAT
GATGAAAGCCTGCCAGCAGGCATGTAAGTTCGGTGCTGTAAGCATGACAAGAGACAGAGCCTACATAGACCCTGACAAAT
GCAAGGAATGCGGCATGTGTGCCAAAGCCTGTCCATACAATGCAATCGCAGACCTCATAAGGCCATGTAAGAAAATCTGT
CCAGCCAATGCTATTACAATGGATGAGAATGGCATCTGTGAAATAGATGAAAACAAATGTATCCAGTGCGGACAGTGTAT
CCACGCCTGTCCATTCGGTGCTATCGGTTCTAAAACTGATATAGTTGATGTAATAAAGGCAATCGTAGACGGAAAGAAAG
TCGTTGCCATGGTAGCACCTGCTGTTGAAGGACAGTTTGGAGACACAATAACAATGAGCAGCATCCGCACAGCATGCAAG
AAGCTGGGCTTTAATGATATGTATGAGGTAGGTCTTGGCGGAGACCTTACTGCACAGGCCGAGGCAGAAGAATGGCTTGA
AGCAGCTAAAGAAGGAAAGAAGCTTACAACCTCATGCTGTCCTGCATTTGTTAATCTGATTAAGAAACAGTATCCTGAGC
TTGCAGAACATATATCAACAACTATATCCCCTATGTTTGCACTTTCAAGACTTCTTAAGTCAGAAGATCCTGATACAATA
ACCGTATTTATCGGACCATGTATAGCCAAGAAGAATGAAAAGCAGGAATATAAGGGTCAGGGAAATGCTGATTTCGTACT
TACACTCGGTGAATTCAGAGCAATGATGCGGGCTAAAGAAGTAGTTCTTGAGCCTGAGGAAAACAGCGACCAGCAGGCAA
GCATATATGGTAAAAGATTCGGTAACGGAGGCGGTGTTTCCGCTGCTGTTGCACAATGTATGCGTGAAGCAGGTGCTGAC
CCTGATAAATTCAATATAGAAAAATGCTCAGGTGCTGCCGAATGTAAGAAAGCACTTACACTTCTTAAAGTAGGAAAACT
CCCTGCAGATTTCATTGAGGGAATGGTATGTGAAGGCGGCTGTGTTGGTGGACCAAGCCGTCACAGAAGCGGAAAGAATC
CTGTTCTTGCTGCCAAAGACCGTGACAAGCTGCTCGCCGAAGCAGACAACCGTAATGTTTCAGACAACTTAAGTAAATAT
GACTTAACAGCATTTTCAATGCACAAATAA

Upstream 100 bases:

>100_bases
GAGAAAAAATACCACATTTATATAGAATCATTTTAAAAAATCTGCTATAGTAATTAGTAATCGATAATTTTTTGTCAATT
ATTACAAAGGAGGTTTCATT

Downstream 100 bases:

>100_bases
AATTAACGCAAAATAGCGTTGGCAATATTCACATTGTCAACGCTATTTTTTTAGTGCTGCTTTTAAAGTAAGCACAACAA
GTTTTTCAAATATCACACTC

Product: ferredoxin hydrogenase

Products: NA

Alternate protein names: CpI; Fe-only hydrogenase; [Fe] hydrogenase [H]

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MLSNDATIQNIKHEILYEVAKLAYAGRFEEEKDELAYKMFPGPKARFRCCVYKEREIARQRIRLAEGKCPTESDHPGANN
IIQVIEAACADCPLSHYIVTDNCRKCMMKACQQACKFGAVSMTRDRAYIDPDKCKECGMCAKACPYNAIADLIRPCKKIC
PANAITMDENGICEIDENKCIQCGQCIHACPFGAIGSKTDIVDVIKAIVDGKKVVAMVAPAVEGQFGDTITMSSIRTACK
KLGFNDMYEVGLGGDLTAQAEAEEWLEAAKEGKKLTTSCCPAFVNLIKKQYPELAEHISTTISPMFALSRLLKSEDPDTI
TVFIGPCIAKKNEKQEYKGQGNADFVLTLGEFRAMMRAKEVVLEPEENSDQQASIYGKRFGNGGGVSAAVAQCMREAGAD
PDKFNIEKCSGAAECKKALTLLKVGKLPADFIEGMVCEGGCVGGPSRHRSGKNPVLAAKDRDKLLAEADNRNVSDNLSKY
DLTAFSMHK

Sequences:

>Translated_489_residues
MLSNDATIQNIKHEILYEVAKLAYAGRFEEEKDELAYKMFPGPKARFRCCVYKEREIARQRIRLAEGKCPTESDHPGANN
IIQVIEAACADCPLSHYIVTDNCRKCMMKACQQACKFGAVSMTRDRAYIDPDKCKECGMCAKACPYNAIADLIRPCKKIC
PANAITMDENGICEIDENKCIQCGQCIHACPFGAIGSKTDIVDVIKAIVDGKKVVAMVAPAVEGQFGDTITMSSIRTACK
KLGFNDMYEVGLGGDLTAQAEAEEWLEAAKEGKKLTTSCCPAFVNLIKKQYPELAEHISTTISPMFALSRLLKSEDPDTI
TVFIGPCIAKKNEKQEYKGQGNADFVLTLGEFRAMMRAKEVVLEPEENSDQQASIYGKRFGNGGGVSAAVAQCMREAGAD
PDKFNIEKCSGAAECKKALTLLKVGKLPADFIEGMVCEGGCVGGPSRHRSGKNPVLAAKDRDKLLAEADNRNVSDNLSKY
DLTAFSMHK
>Mature_489_residues
MLSNDATIQNIKHEILYEVAKLAYAGRFEEEKDELAYKMFPGPKARFRCCVYKEREIARQRIRLAEGKCPTESDHPGANN
IIQVIEAACADCPLSHYIVTDNCRKCMMKACQQACKFGAVSMTRDRAYIDPDKCKECGMCAKACPYNAIADLIRPCKKIC
PANAITMDENGICEIDENKCIQCGQCIHACPFGAIGSKTDIVDVIKAIVDGKKVVAMVAPAVEGQFGDTITMSSIRTACK
KLGFNDMYEVGLGGDLTAQAEAEEWLEAAKEGKKLTTSCCPAFVNLIKKQYPELAEHISTTISPMFALSRLLKSEDPDTI
TVFIGPCIAKKNEKQEYKGQGNADFVLTLGEFRAMMRAKEVVLEPEENSDQQASIYGKRFGNGGGVSAAVAQCMREAGAD
PDKFNIEKCSGAAECKKALTLLKVGKLPADFIEGMVCEGGCVGGPSRHRSGKNPVLAAKDRDKLLAEADNRNVSDNLSKY
DLTAFSMHK

Specific function: Unknown

COG id: COG4624

COG function: function code R; Iron only hydrogenase large subunit, C-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR012675
- InterPro:   IPR009016
- InterPro:   IPR004108
- InterPro:   IPR003149
- InterPro:   IPR013352
- InterPro:   IPR001041 [H]

Pfam domain/function: PF02906 Fe_hyd_lg_C; PF02256 Fe_hyd_SSU [H]

EC number: =1.12.7.2 [H]

Molecular weight: Translated: 53381; Mature: 53381

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
5.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSNDATIQNIKHEILYEVAKLAYAGRFEEEKDELAYKMFPGPKARFRCCVYKEREIARQ
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHEEEEEHHHHHHHHH
RIRLAEGKCPTESDHPGANNIIQVIEAACADCPLSHYIVTDNCRKCMMKACQQACKFGAV
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHCCCC
SMTRDRAYIDPDKCKECGMCAKACPYNAIADLIRPCKKICPANAITMDENGICEIDENKC
EEECCCCCCCHHHHHHHCCHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCCEEECCCCH
IQCGQCIHACPFGAIGSKTDIVDVIKAIVDGKKVVAMVAPAVEGQFGDTITMSSIRTACK
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHCCCCCCEEEHHHHHHHHH
KLGFNDMYEVGLGGDLTAQAEAEEWLEAAKEGKKLTTSCCPAFVNLIKKQYPELAEHIST
HCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TISPMFALSRLLKSEDPDTITVFIGPCIAKKNEKQEYKGQGNADFVLTLGEFRAMMRAKE
HHHHHHHHHHHHHCCCCCEEEEEECCHHCCCCCHHHHCCCCCCEEEEEHHHHHHHHHHHH
VVLEPEENSDQQASIYGKRFGNGGGVSAAVAQCMREAGADPDKFNIEKCSGAAECKKALT
HHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHH
LLKVGKLPADFIEGMVCEGGCVGGPSRHRSGKNPVLAAKDRDKLLAEADNRNVSDNLSKY
HHHHCCCCHHHHCCEECCCCCCCCCHHCCCCCCCEEECCCHHHHHHHCCCCCCCCCCCHH
DLTAFSMHK
CCCCCCCCC
>Mature Secondary Structure
MLSNDATIQNIKHEILYEVAKLAYAGRFEEEKDELAYKMFPGPKARFRCCVYKEREIARQ
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHEEEEEHHHHHHHHH
RIRLAEGKCPTESDHPGANNIIQVIEAACADCPLSHYIVTDNCRKCMMKACQQACKFGAV
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHCCCC
SMTRDRAYIDPDKCKECGMCAKACPYNAIADLIRPCKKICPANAITMDENGICEIDENKC
EEECCCCCCCHHHHHHHCCHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCCEEECCCCH
IQCGQCIHACPFGAIGSKTDIVDVIKAIVDGKKVVAMVAPAVEGQFGDTITMSSIRTACK
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHCCCCCCEEEHHHHHHHHH
KLGFNDMYEVGLGGDLTAQAEAEEWLEAAKEGKKLTTSCCPAFVNLIKKQYPELAEHIST
HCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TISPMFALSRLLKSEDPDTITVFIGPCIAKKNEKQEYKGQGNADFVLTLGEFRAMMRAKE
HHHHHHHHHHHHHCCCCCEEEEEECCHHCCCCCHHHHCCCCCCEEEEEHHHHHHHHHHHH
VVLEPEENSDQQASIYGKRFGNGGGVSAAVAQCMREAGADPDKFNIEKCSGAAECKKALT
HHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHH
LLKVGKLPADFIEGMVCEGGCVGGPSRHRSGKNPVLAAKDRDKLLAEADNRNVSDNLSKY
HHHHCCCCHHHHCCEECCCCCCCCCHHCCCCCCCEEECCCHHHHHHHCCCCCCCCCCCHH
DLTAFSMHK
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1911757; 9836629; 10529166 [H]