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The map label for this gene is ynfJ [C]

Identifier: 238917313

GI number: 238917313

Start: 1430134

End: 1431411

Strand: Direct

Name: ynfJ [C]

Synonym: EUBELI_01388

Alternate gene names: 238917313

Gene position: 1430134-1431411 (Clockwise)

Preceding gene: 238917312

Following gene: 238917318

Centisome position: 66.7

GC content: 39.98

Gene sequence:

>1278_bases
ATGAGGTATTGGGATATGGATAAAGAAACTTTGTTTGAATATATTCAACGGCTTAAACTTGCAGTAATAACTCTTTTCAA
ATGGCTATTCTGTTCGTTTGTATGTGGCTGTTTTATCGGTTCTGTCGGTGCTGTATTTCACCTGATGCTTGGTTATGTAG
GCAGCCTGCGGGTTGAATACCCATTTTTACTATTCGGACTGCCTGTTGCAGGTATCATCATTGTATTCATGTACAACATT
GTTCACGAAGCAGGAAACCGCGGAACTAACCTTGTCATAACTGCAATACAGTCGAATGATGAAGTACCTGGAAGAGTTGC
CCCTCTTATAATTATATCAACTCTTCTTACCCATCTTTGTGGTGGTTCTGCCGGACGAGAAGGTGCTGCGCTTCAGGTCG
GTGGTGCATTAGGCAATACATTTGCAAAACTATTTAAATTCGATGAGAAGGATACTCGAATTATGATTATGTGTGGTATG
AGTGCCTGTTTCTCAGCACTTTTTGGAACACCTATTGCAGCAGCCGTTTTCTCTATGGAAGTAATAAGCGTTGGTGTTAT
GTATTATGCTGCTTTAGTGCCATGCGTACTCGCTGCATTTGTAGCACAGGGCATAGCCTCTGCACTGGGACTTGAATCTA
CACATTTTGTAGTTGATGAAATCGCTTCTTTTTCTTTTATTAATGGCAGTAAATTCATCATCATGTCCGTACTTTTTGCT
CTTGTAAGCATTCTGCTGTGTGTTGTTTTACACGGTACTTCAAAGCTCTACATTAATTACATAAACAACCCATACATAAG
AATAATTATTGCCGGAGTCCTTGTTATTTCCATGCGTTACATATTTGGCACAACTGATTATCTCGGTGCAGGCTCAGATA
TTATTGCAAAAAGCTTTGTAACAAGCTGTGCATGGTATGTATTCCTTTTAAAAATGCTGTTTACAGCCGTAACATTGGGT
GGTGGATTCAAAGGTGGTGAGATTGTTCCTACTCTTTTCGTGGGTGCAACGCTTGGAAGCTTCTTAGCACCTATATTCGG
ACTCCCTGTTGGATTGTGTGCAGCATGTGGTATGGTAAGTGTGTTCTGTGGAGTAACTAACTGCCCACTCACATCATTCA
TTCTATCTATTGAGATGTTTGGTGCATCAACAATGAAATTCACAATTCTGTGTATTGCATTAAGTTATCTGTTATCCGGA
TATTACAGCCTGTATAACAGCCAGAAAATCGTCTATTCTAAGTATAAGACAGAATATATAAACCGCCGGTCCCATTGA

Upstream 100 bases:

>100_bases
AGCAGCCAATTCATACACTCCACCTTCATGGTTTATACAGGATGTAACCAATAATCCGGATTATCATAACAGCAACATGA
GTAAAAAGGACTTTTAAAGT

Downstream 100 bases:

>100_bases
CCTATACAGGTCAAAGAACCGACGGTTCTTTTATTGGAAGGCTGCTATTTACACATATCTCCAGTCTTCTATCCGAAACT
GTATTGAAACAATCCCATTA

Product: chloride channel protein, CIC family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MRYWDMDKETLFEYIQRLKLAVITLFKWLFCSFVCGCFIGSVGAVFHLMLGYVGSLRVEYPFLLFGLPVAGIIIVFMYNI
VHEAGNRGTNLVITAIQSNDEVPGRVAPLIIISTLLTHLCGGSAGREGAALQVGGALGNTFAKLFKFDEKDTRIMIMCGM
SACFSALFGTPIAAAVFSMEVISVGVMYYAALVPCVLAAFVAQGIASALGLESTHFVVDEIASFSFINGSKFIIMSVLFA
LVSILLCVVLHGTSKLYINYINNPYIRIIIAGVLVISMRYIFGTTDYLGAGSDIIAKSFVTSCAWYVFLLKMLFTAVTLG
GGFKGGEIVPTLFVGATLGSFLAPIFGLPVGLCAACGMVSVFCGVTNCPLTSFILSIEMFGASTMKFTILCIALSYLLSG
YYSLYNSQKIVYSKYKTEYINRRSH

Sequences:

>Translated_425_residues
MRYWDMDKETLFEYIQRLKLAVITLFKWLFCSFVCGCFIGSVGAVFHLMLGYVGSLRVEYPFLLFGLPVAGIIIVFMYNI
VHEAGNRGTNLVITAIQSNDEVPGRVAPLIIISTLLTHLCGGSAGREGAALQVGGALGNTFAKLFKFDEKDTRIMIMCGM
SACFSALFGTPIAAAVFSMEVISVGVMYYAALVPCVLAAFVAQGIASALGLESTHFVVDEIASFSFINGSKFIIMSVLFA
LVSILLCVVLHGTSKLYINYINNPYIRIIIAGVLVISMRYIFGTTDYLGAGSDIIAKSFVTSCAWYVFLLKMLFTAVTLG
GGFKGGEIVPTLFVGATLGSFLAPIFGLPVGLCAACGMVSVFCGVTNCPLTSFILSIEMFGASTMKFTILCIALSYLLSG
YYSLYNSQKIVYSKYKTEYINRRSH
>Mature_425_residues
MRYWDMDKETLFEYIQRLKLAVITLFKWLFCSFVCGCFIGSVGAVFHLMLGYVGSLRVEYPFLLFGLPVAGIIIVFMYNI
VHEAGNRGTNLVITAIQSNDEVPGRVAPLIIISTLLTHLCGGSAGREGAALQVGGALGNTFAKLFKFDEKDTRIMIMCGM
SACFSALFGTPIAAAVFSMEVISVGVMYYAALVPCVLAAFVAQGIASALGLESTHFVVDEIASFSFINGSKFIIMSVLFA
LVSILLCVVLHGTSKLYINYINNPYIRIIIAGVLVISMRYIFGTTDYLGAGSDIIAKSFVTSCAWYVFLLKMLFTAVTLG
GGFKGGEIVPTLFVGATLGSFLAPIFGLPVGLCAACGMVSVFCGVTNCPLTSFILSIEMFGASTMKFTILCIALSYLLSG
YYSLYNSQKIVYSKYKTEYINRRSH

Specific function: Unknown

COG id: COG0038

COG function: function code P; Chloride channel protein EriC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chloride channel (TC 2.A.49) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014743
- InterPro:   IPR001807 [H]

Pfam domain/function: PF00654 Voltage_CLC [H]

EC number: NA

Molecular weight: Translated: 46072; Mature: 46072

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYWDMDKETLFEYIQRLKLAVITLFKWLFCSFVCGCFIGSVGAVFHLMLGYVGSLRVEY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCC
PFLLFGLPVAGIIIVFMYNIVHEAGNRGTNLVITAIQSNDEVPGRVAPLIIISTLLTHLC
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
GGSAGREGAALQVGGALGNTFAKLFKFDEKDTRIMIMCGMSACFSALFGTPIAAAVFSME
CCCCCCCCCEEEECHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHCCHHHHHHHHHH
VISVGVMYYAALVPCVLAAFVAQGIASALGLESTHFVVDEIASFSFINGSKFIIMSVLFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
LVSILLCVVLHGTSKLYINYINNPYIRIIIAGVLVISMRYIFGTTDYLGAGSDIIAKSFV
HHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHH
TSCAWYVFLLKMLFTAVTLGGGFKGGEIVPTLFVGATLGSFLAPIFGLPVGLCAACGMVS
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
VFCGVTNCPLTSFILSIEMFGASTMKFTILCIALSYLLSGYYSLYNSQKIVYSKYKTEYI
HHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
NRRSH
HCCCC
>Mature Secondary Structure
MRYWDMDKETLFEYIQRLKLAVITLFKWLFCSFVCGCFIGSVGAVFHLMLGYVGSLRVEY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCC
PFLLFGLPVAGIIIVFMYNIVHEAGNRGTNLVITAIQSNDEVPGRVAPLIIISTLLTHLC
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
GGSAGREGAALQVGGALGNTFAKLFKFDEKDTRIMIMCGMSACFSALFGTPIAAAVFSME
CCCCCCCCCEEEECHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHCCHHHHHHHHHH
VISVGVMYYAALVPCVLAAFVAQGIASALGLESTHFVVDEIASFSFINGSKFIIMSVLFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
LVSILLCVVLHGTSKLYINYINNPYIRIIIAGVLVISMRYIFGTTDYLGAGSDIIAKSFV
HHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHH
TSCAWYVFLLKMLFTAVTLGGGFKGGEIVPTLFVGATLGSFLAPIFGLPVGLCAACGMVS
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
VFCGVTNCPLTSFILSIEMFGASTMKFTILCIALSYLLSGYYSLYNSQKIVYSKYKTEYI
HHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
NRRSH
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]