Click here to switch to the map view.

The map label for this gene is ykgB [H]

Identifier: 238917258

GI number: 238917258

Start: 1365701

End: 1366750

Strand: Direct

Name: ykgB [H]

Synonym: EUBELI_01332

Alternate gene names: 238917258

Gene position: 1365701-1366750 (Clockwise)

Preceding gene: 238917257

Following gene: 238917276

Centisome position: 63.69

GC content: 36.67

Gene sequence:

>1050_bases
ATGGATAAGAAATATGTAGCTTATGCAGGCAGCTATACACACGAAAGCAGTAATGGTATCCATATATATGACTGTGATGT
AGCTAAAGGAAGAATAACAGAACGTGAAGAGGTGGCAATTGATAACCCTTCTTTCATTACATTTTCACATGATAAGAATT
TCTTATATGCTATATGTGACCAGGGTGTTTCAGCTTATGCTGTATTAGAAGACGGCAGCCTTGAGCTTATGAATGTTGCA
TCCATTAACGGAATGCGTGGCTGTCATATATGCGTAACAAGCGATAACAGATTCCTTGTTGTTTCCGGATATCATGACGG
CAAGATTACTGTTTTGCACATCAATGCTGATGGTTCAGTGGGATTTATAGCTGATGAAGTATTTCATAAAGGAATCGGAA
GTGTTGCAGAAAGAAACTTCCGTCCTCATATAAGCTGGAGTACATTCACACCTGATGAAGAACTTTTATGTGTATGTGAC
CCTGGAATTGACCAGATTAAACTTTATGAATTCAATCATGTAACCGGTAAATTAAAGTTATACGATATAATCCGTTCACA
GCAGGAATCTGCACCAAGACAGATTGAATTCAGTCAGGATGGTAAGTTTGCTTATGTTGTCTGCGAAATGAAGAATTATA
TTAATGTATATTCTTATGATAAGAATTCAGACAAAGACCGTTTTGATTTAGTACAGAATATATTCACTGTAAGAAGAGAC
CATAAATCTAACAGTGCCGCTGCTAACATAACATTTGACAGCACAGGAAAGCATCTGCTCTGCTCTAACGCCGGCGATAA
TACAGTTACAATATACAAGGTTGATTCCAAAACAGGAAAGCTCTCAAGCCTTAATTCTCTCCCTATCAGTGGTGATTATC
CTAAGTACATAAGGCTCTTCCCTGACGACAAGCATTTAATGTCAATGAATAATGAAGGGAATTCTATCACGATATTTACT
GTAAAATACGACAAAGGGCTCATAATAATGAATGGTCCGGAGCTTAAGATTTCAAGACCTAATAATATGATAATTAAAGA
ACTTAAGTAA

Upstream 100 bases:

>100_bases
GTCCTGACAAGGTTAAGCAAAAATGTATCTGACCAGTATTGAAAATCCTTTACTTATGCTATAAAATAATAATATATATG
TTTTACGGAGGCGGATAATC

Downstream 100 bases:

>100_bases
ATGTGTCTTTGACACATATATTAAAATGGCTGCCGTTTAGTAACGACAGCCATTAATTTTTATGAATATTTCTCTTCACA
GTACTTACATCTATAAACCT

Product: 6-phosphogluconolactonase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MDKKYVAYAGSYTHESSNGIHIYDCDVAKGRITEREEVAIDNPSFITFSHDKNFLYAICDQGVSAYAVLEDGSLELMNVA
SINGMRGCHICVTSDNRFLVVSGYHDGKITVLHINADGSVGFIADEVFHKGIGSVAERNFRPHISWSTFTPDEELLCVCD
PGIDQIKLYEFNHVTGKLKLYDIIRSQQESAPRQIEFSQDGKFAYVVCEMKNYINVYSYDKNSDKDRFDLVQNIFTVRRD
HKSNSAAANITFDSTGKHLLCSNAGDNTVTIYKVDSKTGKLSSLNSLPISGDYPKYIRLFPDDKHLMSMNNEGNSITIFT
VKYDKGLIIMNGPELKISRPNNMIIKELK

Sequences:

>Translated_349_residues
MDKKYVAYAGSYTHESSNGIHIYDCDVAKGRITEREEVAIDNPSFITFSHDKNFLYAICDQGVSAYAVLEDGSLELMNVA
SINGMRGCHICVTSDNRFLVVSGYHDGKITVLHINADGSVGFIADEVFHKGIGSVAERNFRPHISWSTFTPDEELLCVCD
PGIDQIKLYEFNHVTGKLKLYDIIRSQQESAPRQIEFSQDGKFAYVVCEMKNYINVYSYDKNSDKDRFDLVQNIFTVRRD
HKSNSAAANITFDSTGKHLLCSNAGDNTVTIYKVDSKTGKLSSLNSLPISGDYPKYIRLFPDDKHLMSMNNEGNSITIFT
VKYDKGLIIMNGPELKISRPNNMIIKELK
>Mature_349_residues
MDKKYVAYAGSYTHESSNGIHIYDCDVAKGRITEREEVAIDNPSFITFSHDKNFLYAICDQGVSAYAVLEDGSLELMNVA
SINGMRGCHICVTSDNRFLVVSGYHDGKITVLHINADGSVGFIADEVFHKGIGSVAERNFRPHISWSTFTPDEELLCVCD
PGIDQIKLYEFNHVTGKLKLYDIIRSQQESAPRQIEFSQDGKFAYVVCEMKNYINVYSYDKNSDKDRFDLVQNIFTVRRD
HKSNSAAANITFDSTGKHLLCSNAGDNTVTIYKVDSKTGKLSSLNSLPISGDYPKYIRLFPDDKHLMSMNNEGNSITIFT
VKYDKGLIIMNGPELKISRPNNMIIKELK

Specific function: Unknown

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR019405
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10282 DUF2394 [H]

EC number: NA

Molecular weight: Translated: 39228; Mature: 39228

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKYVAYAGSYTHESSNGIHIYDCDVAKGRITEREEVAIDNPSFITFSHDKNFLYAICD
CCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCEEEEECCCCEEEEEEC
QGVSAYAVLEDGSLELMNVASINGMRGCHICVTSDNRFLVVSGYHDGKITVLHINADGSV
CCCEEEEEEECCCEEEEEEEECCCCCCEEEEEECCCCEEEEEECCCCEEEEEEEECCCCE
GFIADEVFHKGIGSVAERNFRPHISWSTFTPDEELLCVCDPGIDQIKLYEFNHVTGKLKL
EEEHHHHHHHCCCHHHHCCCCCCEEEEEECCCCCEEEEECCCCCEEEEEEEECCCCEEEE
YDIIRSQQESAPRQIEFSQDGKFAYVVCEMKNYINVYSYDKNSDKDRFDLVQNIFTVRRD
EEHHHHHHHCCCCEEEECCCCCEEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHC
HKSNSAAANITFDSTGKHLLCSNAGDNTVTIYKVDSKTGKLSSLNSLPISGDYPKYIRLF
CCCCCEEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEC
PDDKHLMSMNNEGNSITIFTVKYDKGLIIMNGPELKISRPNNMIIKELK
CCCCEEEEECCCCCEEEEEEEEECCCEEEECCCEEEEECCCCEEEEECC
>Mature Secondary Structure
MDKKYVAYAGSYTHESSNGIHIYDCDVAKGRITEREEVAIDNPSFITFSHDKNFLYAICD
CCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCEEEEECCCCEEEEEEC
QGVSAYAVLEDGSLELMNVASINGMRGCHICVTSDNRFLVVSGYHDGKITVLHINADGSV
CCCEEEEEEECCCEEEEEEEECCCCCCEEEEEECCCCEEEEEECCCCEEEEEEEECCCCE
GFIADEVFHKGIGSVAERNFRPHISWSTFTPDEELLCVCDPGIDQIKLYEFNHVTGKLKL
EEEHHHHHHHCCCHHHHCCCCCCEEEEEECCCCCEEEEECCCCCEEEEEEEECCCCEEEE
YDIIRSQQESAPRQIEFSQDGKFAYVVCEMKNYINVYSYDKNSDKDRFDLVQNIFTVRRD
EEHHHHHHHCCCCEEEECCCCCEEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHC
HKSNSAAANITFDSTGKHLLCSNAGDNTVTIYKVDSKTGKLSSLNSLPISGDYPKYIRLF
CCCCCEEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEC
PDDKHLMSMNNEGNSITIFTVKYDKGLIIMNGPELKISRPNNMIIKELK
CCCCEEEEECCCCCEEEEEEEEECCCEEEECCCEEEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]