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The map label for this gene is ylmH [H]

Identifier: 238916862

GI number: 238916862

Start: 946262

End: 947017

Strand: Reverse

Name: ylmH [H]

Synonym: EUBELI_00931

Alternate gene names: 238916862

Gene position: 947017-946262 (Counterclockwise)

Preceding gene: 238916864

Following gene: 238916849

Centisome position: 44.17

GC content: 36.24

Gene sequence:

>756_bases
ATGGATAATGAATCACTTTTAAAAAATAAAATAATGGACGCAGCAAATCGTTCCTTCCGCCAGAATATATATACTTATAC
CAATTTCCTGGATATCAACGAGCAGTCAGTATTCGCACAGATGAAAAACCCACTTAATTTCGTAGCTTTTAAAACATACG
GTGGCAATGATGCATGTGAAAGACAGATGATACAGTTTGGTTCTTTCGAAACTCTTGGCTATGAAGAAGAATTTCCTATA
ACTCTTATAAAGATATCTCCTCTTATAGAAAAATATGCTGAATCACTGTCACACAGAGATTACCTTGGTGCTCTTATGAA
TCTTGGAATTAAAAGAGAAATGCTTGGAGACATAAATATAAAAGGCAAGGACGCCTATCTTTACTGTGTTTCACATATTG
CTGATTTCATAATTGACAACCTGTCTACAGTAAAGCATACACATATCCAGTGTACAAAGACTGATATTAACGATATCGAA
TGTTCACCTGAGCTTGAAGATATTGAAGTTTTATCTGCAAGTGAACGGATTGACGCTGCCGTTGCCAGCCTCACAAAGCT
AAGCCGAAGTCAGGCAGTAGAATTATTCAGGGCAAGAAAAATATTCATTAACAGCCGTCAGATGGAAAACAACAGCTATC
AGTTAAAAGCTAATGATATACTTGTTATCCGCGGAACAGGCAAATTCATCTATCAGGGGTGCGGTAGAGAAACCAAAAAA
GGCCGTGTTTATCTTTCATTTAAAAAATATGTTTAA

Upstream 100 bases:

>100_bases
TCTACATCGTTCCACGAAACAAATGTAATGTAAATTATTCTTAATTCTGTTATAATTCTATCATATTTTCAAAAAACCTG
AAAGGATTATTTATAAACTA

Downstream 100 bases:

>100_bases
AAAAAGGGCTGTGAGAACAGCCCTTATAATATCTTTTTATTACTCTTCTGTTGCTGGAGCTTCTTCCTGAGCTTCGTTGT
CGTTAAGTAATGCCTTAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MDNESLLKNKIMDAANRSFRQNIYTYTNFLDINEQSVFAQMKNPLNFVAFKTYGGNDACERQMIQFGSFETLGYEEEFPI
TLIKISPLIEKYAESLSHRDYLGALMNLGIKREMLGDINIKGKDAYLYCVSHIADFIIDNLSTVKHTHIQCTKTDINDIE
CSPELEDIEVLSASERIDAAVASLTKLSRSQAVELFRARKIFINSRQMENNSYQLKANDILVIRGTGKFIYQGCGRETKK
GRVYLSFKKYV

Sequences:

>Translated_251_residues
MDNESLLKNKIMDAANRSFRQNIYTYTNFLDINEQSVFAQMKNPLNFVAFKTYGGNDACERQMIQFGSFETLGYEEEFPI
TLIKISPLIEKYAESLSHRDYLGALMNLGIKREMLGDINIKGKDAYLYCVSHIADFIIDNLSTVKHTHIQCTKTDINDIE
CSPELEDIEVLSASERIDAAVASLTKLSRSQAVELFRARKIFINSRQMENNSYQLKANDILVIRGTGKFIYQGCGRETKK
GRVYLSFKKYV
>Mature_251_residues
MDNESLLKNKIMDAANRSFRQNIYTYTNFLDINEQSVFAQMKNPLNFVAFKTYGGNDACERQMIQFGSFETLGYEEEFPI
TLIKISPLIEKYAESLSHRDYLGALMNLGIKREMLGDINIKGKDAYLYCVSHIADFIIDNLSTVKHTHIQCTKTDINDIE
CSPELEDIEVLSASERIDAAVASLTKLSRSQAVELFRARKIFINSRQMENNSYQLKANDILVIRGTGKFIYQGCGRETKK
GRVYLSFKKYV

Specific function: Unknown

COG id: COG2302

COG function: function code S; Uncharacterized conserved protein, contains S4-like domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 28739; Mature: 28739

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNESLLKNKIMDAANRSFRQNIYTYTNFLDINEQSVFAQMKNPLNFVAFKTYGGNDACE
CCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHCCCCEEEEEEECCCCHHHH
RQMIQFGSFETLGYEEEFPITLIKISPLIEKYAESLSHRDYLGALMNLGIKREMLGDINI
HHHHHCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHCCHHHHHHHHHCCCCHHHHCCCCC
KGKDAYLYCVSHIADFIIDNLSTVKHTHIQCTKTDINDIECSPELEDIEVLSASERIDAA
CCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
VASLTKLSRSQAVELFRARKIFINSRQMENNSYQLKANDILVIRGTGKFIYQGCGRETKK
HHHHHHHHHHHHHHHHHHHHHEEECEECCCCCEEEEECCEEEEEECCHHEEECCCCCCCC
GRVYLSFKKYV
CEEEEEEECCC
>Mature Secondary Structure
MDNESLLKNKIMDAANRSFRQNIYTYTNFLDINEQSVFAQMKNPLNFVAFKTYGGNDACE
CCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHCCCCEEEEEEECCCCHHHH
RQMIQFGSFETLGYEEEFPITLIKISPLIEKYAESLSHRDYLGALMNLGIKREMLGDINI
HHHHHCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHCCHHHHHHHHHCCCCHHHHCCCCC
KGKDAYLYCVSHIADFIIDNLSTVKHTHIQCTKTDINDIECSPELEDIEVLSASERIDAA
CCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
VASLTKLSRSQAVELFRARKIFINSRQMENNSYQLKANDILVIRGTGKFIYQGCGRETKK
HHHHHHHHHHHHHHHHHHHHHEEECEECCCCCEEEEECCEEEEEECCHHEEECCCCCCCC
GRVYLSFKKYV
CEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9045828; 9384377 [H]