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The map label for this gene is yraL [H]

Identifier: 238896653

GI number: 238896653

Start: 4632429

End: 4633292

Strand: Reverse

Name: yraL [H]

Synonym: KP1_4858

Alternate gene names: 238896653

Gene position: 4633292-4632429 (Counterclockwise)

Preceding gene: 238896658

Following gene: 238896652

Centisome position: 88.28

GC content: 57.99

Gene sequence:

>864_bases
ATGAAACAACACGAATCAGCGGATAATTCTCAGGGGCAGCTCTATATTGTGCCCACTCCGATAGGAAATCTGTCTGATAT
CACGCAGCGTGCACTGGAAGTGCTGCAAGCCGTTGATTTAATTGCAGCGGAAGATACCCGTCATACCGGTTTGCTGCTGC
AACATTTTGCGATAAACGCCCGTTTGTTTGCGCTTCACGACCATAATGAGCAGCAAAAGGCGGAAACCCTGCTTGCCAAA
CTGAAAGAAGGGCAAAACATCGCGCTGGTTTCCGATGCCGGCACGCCGCTGATTAACGATCCTGGTTACCATCTGGTGCG
CACCTGCCGCGAAGCGAATATTCGCGTGGTGCCGCTGCCGGGCCCCTGTGCGGCTATCGCCGCCCTGAGCGCCGCCGGCC
TGCCTTCCGACCGTTTCTGTTATGAAGGCTTCCTGCCGGCGAAATCGAAAGGCCGCCGCGATACCCTGAAAGCGCTGGAA
GAAGAGCCGCGCACCCTTATCTTCTATGAGTCGACCCACCGTCTGGTGGAGAGTCTGGAGGATATCTGCGCGGTACTGGG
AGAATCCCGCTATGTGGTGCTGGCTCGTGAGCTGACCAAAACCTGGGAGTCGATCCATGGCGCGCCGATTGGTGAGCTGG
TGGCGTGGGTGAAGGAAGATGAAAACCGTCGCAAAGGCGAGATGGTGCTGATCGTCGAAGGTTTCAAGGCTCAGGAAGAG
GCGCTGCCGGCGGCCGCGCTGCGTACTCTGGCGCTGCTGCAGGCGGAGCTGCCGCTGAAGAAAGCCGCCGCGCTGGCCGC
GGAAATCCACGGCGTGAAGAAAAATGCGTTGTATAAGTACGCCCTGGAGCAGCAGGGGGAGTAA

Upstream 100 bases:

>100_bases
GCGCGGGCTTAGAACGAAGAAATGTTGACGGTACCATAAGTGTCCAGTGATATTTTTTTGGCTCAATGCTCAATATTAAA
TCGGCAATACGGACGAGACA

Downstream 100 bases:

>100_bases
ACGATGAGCCGTTACCAACCGCCGTTTAGCATCACACCCTCGGTCCTCAACCTTGTCGTTGAGATTGGGGAATTGCTTGG
GCATTGGTCGGCGAAACGTG

Product: putative methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MKQHESADNSQGQLYIVPTPIGNLSDITQRALEVLQAVDLIAAEDTRHTGLLLQHFAINARLFALHDHNEQQKAETLLAK
LKEGQNIALVSDAGTPLINDPGYHLVRTCREANIRVVPLPGPCAAIAALSAAGLPSDRFCYEGFLPAKSKGRRDTLKALE
EEPRTLIFYESTHRLVESLEDICAVLGESRYVVLARELTKTWESIHGAPIGELVAWVKEDENRRKGEMVLIVEGFKAQEE
ALPAAALRTLALLQAELPLKKAAALAAEIHGVKKNALYKYALEQQGE

Sequences:

>Translated_287_residues
MKQHESADNSQGQLYIVPTPIGNLSDITQRALEVLQAVDLIAAEDTRHTGLLLQHFAINARLFALHDHNEQQKAETLLAK
LKEGQNIALVSDAGTPLINDPGYHLVRTCREANIRVVPLPGPCAAIAALSAAGLPSDRFCYEGFLPAKSKGRRDTLKALE
EEPRTLIFYESTHRLVESLEDICAVLGESRYVVLARELTKTWESIHGAPIGELVAWVKEDENRRKGEMVLIVEGFKAQEE
ALPAAALRTLALLQAELPLKKAAALAAEIHGVKKNALYKYALEQQGE
>Mature_287_residues
MKQHESADNSQGQLYIVPTPIGNLSDITQRALEVLQAVDLIAAEDTRHTGLLLQHFAINARLFALHDHNEQQKAETLLAK
LKEGQNIALVSDAGTPLINDPGYHLVRTCREANIRVVPLPGPCAAIAALSAAGLPSDRFCYEGFLPAKSKGRRDTLKALE
EEPRTLIFYESTHRLVESLEDICAVLGESRYVVLARELTKTWESIHGAPIGELVAWVKEDENRRKGEMVLIVEGFKAQEE
ALPAAALRTLALLQAELPLKKAAALAAEIHGVKKNALYKYALEQQGE

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=286, Percent_Identity=93.7062937062937, Blast_Score=531, Evalue=1e-152,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 31536; Mature: 31536

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQHESADNSQGQLYIVPTPIGNLSDITQRALEVLQAVDLIAAEDTRHTGLLLQHFAINA
CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCE
RLFALHDHNEQQKAETLLAKLKEGQNIALVSDAGTPLINDPGYHLVRTCREANIRVVPLP
EEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCEEEEECC
GPCAAIAALSAAGLPSDRFCYEGFLPAKSKGRRDTLKALEEEPRTLIFYESTHRLVESLE
CHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCHHHHHHHHCCCCEEEEECHHHHHHHHHH
DICAVLGESRYVVLARELTKTWESIHGAPIGELVAWVKEDENRRKGEMVLIVEGFKAQEE
HHHHHHCCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCHHH
ALPAAALRTLALLQAELPLKKAAALAAEIHGVKKNALYKYALEQQGE
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKQHESADNSQGQLYIVPTPIGNLSDITQRALEVLQAVDLIAAEDTRHTGLLLQHFAINA
CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCE
RLFALHDHNEQQKAETLLAKLKEGQNIALVSDAGTPLINDPGYHLVRTCREANIRVVPLP
EEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCEEEEECC
GPCAAIAALSAAGLPSDRFCYEGFLPAKSKGRRDTLKALEEEPRTLIFYESTHRLVESLE
CHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCHHHHHHHHCCCCEEEEECHHHHHHHHHH
DICAVLGESRYVVLARELTKTWESIHGAPIGELVAWVKEDENRRKGEMVLIVEGFKAQEE
HHHHHHCCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCHHH
ALPAAALRTLALLQAELPLKKAAALAAEIHGVKKNALYKYALEQQGE
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]