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The map label for this gene is ygiF [H]

Identifier: 238896553

GI number: 238896553

Start: 4533395

End: 4534693

Strand: Reverse

Name: ygiF [H]

Synonym: KP1_4744

Alternate gene names: 238896553

Gene position: 4534693-4533395 (Counterclockwise)

Preceding gene: 238896557

Following gene: 238896552

Centisome position: 86.4

GC content: 63.51

Gene sequence:

>1299_bases
ATGGCTCAAGAAATCGAACTCAAGTTTATCGTCGCTCAGGATGGGGTAGAGACGCTGCGCGAGCAGCTCAATGCGCTCGA
GGCGAAACATACGCCCGCGGGCCAGTTGCTGAACATTTATTACGAAACCGCCGATAACTGGCTGCGTCGTCACGATATGG
GGCTGCGCATCCGCGGCGATCAGGGGCGTTATGAGATGACGCTGAAAATCGCCGGTCGGGTGGTCGGCGGCCTGCACCAG
CGCCCGGAATATAATATTCCACTGGATAAACCGGAGCTGGCGCTTGAGCGCCTGCCGGCGGAGGTCTGGCCGCAAGGGGA
ACTTCCGGCCGCGCTGGCGGAGCACGTCCAGCCGCTGTTCAGCACCGATTTTGCCCGTGAACGCTGGGTGATCCAGGAAG
GAAAGAGTGAGATTGAGATTGCCCTCGATCGCGGCGAAGTCAAGGCGGGCGAACATCAGGAGCCGATCTGCGAACTGGAG
CTGGAGCTGCTCGCCGGGGAGACCGCCGATCTGCTGCGCCTCGCGCATCGTTTGCTGGAGAGCGGCGTCCTGCGTCAGGG
GAGCCTGAGCAAAGCCGCGCGCGGGTATCATCTGGCGCAAGGTAACAATGAGCGTCCGGTGACCCGGCTGGCGGTGCTGC
CGGTGGCAGCGAAGGCCAGCGTGGAGCAGGGGCTGGAGGCGGCGCTGGAGAGCGCCCTGGCGCATTGGCTGTATCACGAC
GAGATCTGGCTGCGCGGCAACGCAAAAGCCAAAGCGGAAATTCTGCTGGCGATAGCCCGCGTGCGCCATGCCCTCGTGCT
GTTTGGCGGCATCGTGCCGCGTAAGGCGACCACCCACCTCCGCGCGTTGCTGAACGACGCCGACGCCGTTCTGCTGGCTG
CGGACACCGCCGACGAAGCGTTATTCCGCACCGAGGTCGTTGGCGCCAAACTGGCCCTGACCGAATGGCTGGTCCAGCGC
GGGTGGCGTCCGTTCCTCAACGAGGCGGGAGAGAAAAAAATAGCCGGCTCGTTCAAACGGTTTGCCGATATTCACCTCTC
GCGGGTGGCGGCCGAGCTGCGCAGCGCCGTGCAGCATCTGGCGGTAGAAGATGCCGCTGACCAGTTGCCGAAGCTGTCCC
GCGACATCGACAGCGTCCAGCTGCTGGCGGGCGCCTATGGCGACGCCGTCGCGCCCTGGCTGGAGAACTGGCAGGAACTT
CAGCGTGCGATAGAGCATGACGACCGCAGCGTGTTTGAATATTTCCGTCGCCAGGCGCTGGCTGCCGAGCCGTTCTGGCT
GCATAGTGGAAAACGATAA

Upstream 100 bases:

>100_bases
TGCATGGCGATTCACCGCAAAATACTATCTACTGACAAAAAATATCGTCGTAAGTTCGCCGCAATTTGTCGGCGCAGCAC
AGAAGCGGAAGAATTCAGTC

Downstream 100 bases:

>100_bases
TTACAGGCCAGGGAGCCCTTATGATGCCGCTTTCTCCGCAGTTACAGCAGCACTGGCAGACGGTCGCTGACCGTCTGCCA
GCGGATTTTCCCGTTGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: ORFXE [H]

Number of amino acids: Translated: 432; Mature: 431

Protein sequence:

>432_residues
MAQEIELKFIVAQDGVETLREQLNALEAKHTPAGQLLNIYYETADNWLRRHDMGLRIRGDQGRYEMTLKIAGRVVGGLHQ
RPEYNIPLDKPELALERLPAEVWPQGELPAALAEHVQPLFSTDFARERWVIQEGKSEIEIALDRGEVKAGEHQEPICELE
LELLAGETADLLRLAHRLLESGVLRQGSLSKAARGYHLAQGNNERPVTRLAVLPVAAKASVEQGLEAALESALAHWLYHD
EIWLRGNAKAKAEILLAIARVRHALVLFGGIVPRKATTHLRALLNDADAVLLAADTADEALFRTEVVGAKLALTEWLVQR
GWRPFLNEAGEKKIAGSFKRFADIHLSRVAAELRSAVQHLAVEDAADQLPKLSRDIDSVQLLAGAYGDAVAPWLENWQEL
QRAIEHDDRSVFEYFRRQALAAEPFWLHSGKR

Sequences:

>Translated_432_residues
MAQEIELKFIVAQDGVETLREQLNALEAKHTPAGQLLNIYYETADNWLRRHDMGLRIRGDQGRYEMTLKIAGRVVGGLHQ
RPEYNIPLDKPELALERLPAEVWPQGELPAALAEHVQPLFSTDFARERWVIQEGKSEIEIALDRGEVKAGEHQEPICELE
LELLAGETADLLRLAHRLLESGVLRQGSLSKAARGYHLAQGNNERPVTRLAVLPVAAKASVEQGLEAALESALAHWLYHD
EIWLRGNAKAKAEILLAIARVRHALVLFGGIVPRKATTHLRALLNDADAVLLAADTADEALFRTEVVGAKLALTEWLVQR
GWRPFLNEAGEKKIAGSFKRFADIHLSRVAAELRSAVQHLAVEDAADQLPKLSRDIDSVQLLAGAYGDAVAPWLENWQEL
QRAIEHDDRSVFEYFRRQALAAEPFWLHSGKR
>Mature_431_residues
AQEIELKFIVAQDGVETLREQLNALEAKHTPAGQLLNIYYETADNWLRRHDMGLRIRGDQGRYEMTLKIAGRVVGGLHQR
PEYNIPLDKPELALERLPAEVWPQGELPAALAEHVQPLFSTDFARERWVIQEGKSEIEIALDRGEVKAGEHQEPICELEL
ELLAGETADLLRLAHRLLESGVLRQGSLSKAARGYHLAQGNNERPVTRLAVLPVAAKASVEQGLEAALESALAHWLYHDE
IWLRGNAKAKAEILLAIARVRHALVLFGGIVPRKATTHLRALLNDADAVLLAADTADEALFRTEVVGAKLALTEWLVQRG
WRPFLNEAGEKKIAGSFKRFADIHLSRVAAELRSAVQHLAVEDAADQLPKLSRDIDSVQLLAGAYGDAVAPWLENWQELQ
RAIEHDDRSVFEYFRRQALAAEPFWLHSGKR

Specific function: Unknown

COG id: COG3025

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1598 [H]

Homologues:

Organism=Escherichia coli, GI1789434, Length=433, Percent_Identity=63.5103926096998, Blast_Score=524, Evalue=1e-150,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 48298; Mature: 48166

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQEIELKFIVAQDGVETLREQLNALEAKHTPAGQLLNIYYETADNWLRRHDMGLRIRGD
CCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECC
QGRYEMTLKIAGRVVGGLHQRPEYNIPLDKPELALERLPAEVWPQGELPAALAEHVQPLF
CCCEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHCCCCCCCHHHHHHHHHHH
STDFARERWVIQEGKSEIEIALDRGEVKAGEHQEPICELELELLAGETADLLRLAHRLLE
HHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
SGVLRQGSLSKAARGYHLAQGNNERPVTRLAVLPVAAKASVEQGLEAALESALAHWLYHD
HCCCCCCCHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EIWLRGNAKAKAEILLAIARVRHALVLFGGIVPRKATTHLRALLNDADAVLLAADTADEA
CEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCHHHH
LFRTEVVGAKLALTEWLVQRGWRPFLNEAGEKKIAGSFKRFADIHLSRVAAELRSAVQHL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVEDAADQLPKLSRDIDSVQLLAGAYGDAVAPWLENWQELQRAIEHDDRSVFEYFRRQAL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
AAEPFWLHSGKR
CCCCCCCCCCCC
>Mature Secondary Structure 
AQEIELKFIVAQDGVETLREQLNALEAKHTPAGQLLNIYYETADNWLRRHDMGLRIRGD
CCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECC
QGRYEMTLKIAGRVVGGLHQRPEYNIPLDKPELALERLPAEVWPQGELPAALAEHVQPLF
CCCEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHCCCCCCCHHHHHHHHHHH
STDFARERWVIQEGKSEIEIALDRGEVKAGEHQEPICELELELLAGETADLLRLAHRLLE
HHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
SGVLRQGSLSKAARGYHLAQGNNERPVTRLAVLPVAAKASVEQGLEAALESALAHWLYHD
HCCCCCCCHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EIWLRGNAKAKAEILLAIARVRHALVLFGGIVPRKATTHLRALLNDADAVLLAADTADEA
CEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCHHHH
LFRTEVVGAKLALTEWLVQRGWRPFLNEAGEKKIAGSFKRFADIHLSRVAAELRSAVQHL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVEDAADQLPKLSRDIDSVQLLAGAYGDAVAPWLENWQELQRAIEHDDRSVFEYFRRQAL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
AAEPFWLHSGKR
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8412694; 9278503 [H]