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The map label for this gene is ygiRQ [H]

Identifier: 238896527

GI number: 238896527

Start: 4505593

End: 4507776

Strand: Reverse

Name: ygiRQ [H]

Synonym: KP1_4714

Alternate gene names: 238896527

Gene position: 4507776-4505593 (Counterclockwise)

Preceding gene: 238896528

Following gene: 238896526

Centisome position: 85.89

GC content: 59.29

Gene sequence:

>2184_bases
ATGAGCGCAATATCCCTGATCCAACCGGATCGTGACCTTTTTTCCTGGCCGCAATACTGGGCTGCCTGTTTTGGCCCTGC
GCCCTTTTTACCGATGTCGCGTGAAGAGATGGATCAACTTGGCTGGGATAGCTGCGACATTATTCTGGTCACCGGCGACG
CCTATGTCGACCACCCGAGCTTCGGGATGGCTATCTGCGGCCGCATGCTGGAAGCGCAGGGTTTCCGGGTAGGGATCATC
TCCCAGCCGGACTGGAACAGCAAAGACGACTTTATGCGTCTGGGCAAACCGAACCTGTTCTTCGGCGTGACCGCCGGCAA
CATGGACTCAATGATCAACCGTTACACCGCCGACCGTAAACTACGTCATGACGATGCCTATACGGCGGGTAACGTGGCGG
GCAAACGTCCGGACCGCGCTACCCTCGTCTACACCCAGCGCTGTAAAGAGGCGTGGAAAGATGTGCCGGTGATCCTCGGC
GGCATCGAAGCCAGCCTGCGTCGTACCGCCCACTATGATTACTGGTCCGACACCGTGCGCCGCTCGGTGCTGGTGGACTC
CAAGGCCGATATGCTGATGTTCGGCAACGGCGAGCGTCCGCTGGTGGAAGTGGCTCATCGCCTGGCGATGGGCGAAACCA
TCGACCAGATCCGCGATGTGCGCAATACCGCCATCATGGTGAAAGAGGCGCTGCCGGGCTGGAGCGGCGTGGACTCCACC
CGTCTGGATACGCCCGGTAAAATTGACCCCATCCCGCATCCGTACGGTGAAGATCTGCCGTGCGCCGATAACAAACCGGT
CGCGCCGAAAAAACAGGAAGCGAAAAGCATTACTGTGCAACCGCCGCGGCCCAAACCGTGGGAAAAAACCTATGTGCTGC
TGCCTTCCTTCGAGAAGGTGAAAGGCGATAAGGTCCTGTACGCTCACGCCTCGCGCATTTTGCACCACGAAACCAACCCC
GGCTGCGCCCGGGCGCTGATGCAAAAGCACGGCGAGCGCTACATCTGGATCAACCCGCCGGCAATCCCGCTCTCCACCGA
AGAGATGGACAGCGTCTTCGCGCTGCCGTACAAGCGGGTGCCGCATCCTTCCTATGGCGATGCGCGTATTCCGGCGTATG
AGATGATCCGCTTCTCAATCAACATCATGCGCGGCTGCTTCGGCGGCTGTTCGTTCTGCTCGATCACCGAGCACGAAGGA
CGCATAATCCAGAGCCGTTCTGAGGATTCGATCATTAATGAGATCGAAGCCATTCGCGACACCGTGCCCGGCTTTACCGG
GGTGATCTCCGATCTCGGCGGGCCAACGGCCAACATGTATATGCTGCGCTGTAAATCGCCGCGCGCTGAGCAGACCTGCC
GCCGTCTCTCCTGCGTCTATCCGGATATTTGCCCGCACATGGATACCAACCATGAGCCGACGATCAATCTTTATCGCCGC
GCTCGCGAGCTGAAGGGCATCAAGAAGATCCTTATCGCCTCCGGGGTACGCTATGACATCGCGGTCGAAGATCCGCGCTA
TATCAAAGAGCTGGCGACCCACCACGTCGGCGGCTATCTGAAGATCGCCCCGGAGCATACCGAAGAGGGACCGCTGTCGA
AGATGATGAAGCCGGGAATGGGCAGCTACGACCGCTTTAAAGAGCTGTTCGACACCTATTCGAAGCAGGCGGGTAAAGAG
CAGTATCTGATCCCGTACTTTATCTCCGCTCATCCGGGGACCCGTGATGAAGATATGGTGAACCTGGCGCTGTGGCTGAA
GAAGCATCGCTTCCGCCTCGACCAGGTGCAGAACTTCTATCCGTCGCCGCTGGCGAACTCGACCACCATGTATTACACCG
GCAAGAACCCGCTGGGTAAAATTGGTTATAAGAGCGAAGAGGTGGTGGTGCCGAAGGGCGATAAACAGCGCCGTCTGCAC
AAAGCGCTGCTCCGCTACCACGATCCGGCAAACTGGCCGCTGATCCGTCAGGCGCTGGAGGCGATGGGCAAGAAGCACCT
GATTGGCTCCCGTCGCGACTGCCTGGTGCCAGCGCCAACCCTGGACGAAATGCGTGAAGCGCGTCGCCAGAACCGCCATA
CTCGTCCGGCGCTGACCAAGCACACGCCGATCGCCCATCAGCGCCAGACGCCTGCCGCTGCGGGCGCGAAAAAACGCGTT
AAGCCGAAGGCCGTATCACGCTAA

Upstream 100 bases:

>100_bases
CGGTCAGGGTTTGAGAAAATCCTCCTTCATTTCCACTATCATTCCGGCTTATAATCCACGCCCTTTTGGTTATTTTTTTA
TCATTTTCCCCGGAAACAAT

Downstream 100 bases:

>100_bases
GCGGCTGGCCCGGCGGGATCGCTCGCCGGGAACATCTGTGAAAAAAGGAGAGAGGTGATGACGCCGGTCATCCTGTCGCG
ACAACAACTGGACCAGCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 727; Mature: 726

Protein sequence:

>727_residues
MSAISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGII
SQPDWNSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRKLRHDDAYTAGNVAGKRPDRATLVYTQRCKEAWKDVPVILG
GIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGETIDQIRDVRNTAIMVKEALPGWSGVDST
RLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKSITVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNP
GCARALMQKHGERYIWINPPAIPLSTEEMDSVFALPYKRVPHPSYGDARIPAYEMIRFSINIMRGCFGGCSFCSITEHEG
RIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRR
ARELKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKE
QYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLGKIGYKSEEVVVPKGDKQRRLH
KALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTLDEMREARRQNRHTRPALTKHTPIAHQRQTPAAAGAKKRV
KPKAVSR

Sequences:

>Translated_727_residues
MSAISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGII
SQPDWNSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRKLRHDDAYTAGNVAGKRPDRATLVYTQRCKEAWKDVPVILG
GIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGETIDQIRDVRNTAIMVKEALPGWSGVDST
RLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKSITVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNP
GCARALMQKHGERYIWINPPAIPLSTEEMDSVFALPYKRVPHPSYGDARIPAYEMIRFSINIMRGCFGGCSFCSITEHEG
RIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRR
ARELKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKE
QYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLGKIGYKSEEVVVPKGDKQRRLH
KALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTLDEMREARRQNRHTRPALTKHTPIAHQRQTPAAAGAKKRV
KPKAVSR
>Mature_726_residues
SAISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIS
QPDWNSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRKLRHDDAYTAGNVAGKRPDRATLVYTQRCKEAWKDVPVILGG
IEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGETIDQIRDVRNTAIMVKEALPGWSGVDSTR
LDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKSITVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPG
CARALMQKHGERYIWINPPAIPLSTEEMDSVFALPYKRVPHPSYGDARIPAYEMIRFSINIMRGCFGGCSFCSITEHEGR
IIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRA
RELKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQ
YLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLGKIGYKSEEVVVPKGDKQRRLHK
ALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTLDEMREARRQNRHTRPALTKHTPIAHQRQTPAAAGAKKRVK
PKAVSR

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family [H]

Homologues:

Organism=Escherichia coli, GI48994917, Length=740, Percent_Identity=94.0540540540541, Blast_Score=1452, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR020612
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N [H]

EC number: NA

Molecular weight: Translated: 82326; Mature: 82194

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPS
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEEEECCCEECCCC
FGMAICGRMLEAQGFRVGIISQPDWNSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRK
HHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHH
LRHDDAYTAGNVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVR
HCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCHHHHHHH
RSVLVDSKADMLMFGNGERPLVEVAHRLAMGETIDQIRDVRNTAIMVKEALPGWSGVDST
HHHEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHCCCCCCCCCC
RLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKSITVQPPRPKPWEKTYVLLPSFEKV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEECCCCCCCCCCEEEECCCHHHH
KGDKVLYAHASRILHHETNPGCARALMQKHGERYIWINPPAIPLSTEEMDSVFALPYKRV
CCCEEEEHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCHHCC
PHPSYGDARIPAYEMIRFSINIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRD
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCHHHHHHHHHHHHH
TVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRR
HCCCHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
ARELKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGM
HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHCCCC
GSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFY
CCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PSPLANSTTMYYTGKNPLGKIGYKSEEVVVPKGDKQRRLHKALLRYHDPANWPLIRQALE
CCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
AMGKKHLIGSRRDCLVPAPTLDEMREARRQNRHTRPALTKHTPIAHQRQTPAAAGAKKRV
HHCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCHHCC
KPKAVSR
CCHHCCC
>Mature Secondary Structure 
SAISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPS
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEEEECCCEECCCC
FGMAICGRMLEAQGFRVGIISQPDWNSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRK
HHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHH
LRHDDAYTAGNVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVR
HCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCHHHHHHH
RSVLVDSKADMLMFGNGERPLVEVAHRLAMGETIDQIRDVRNTAIMVKEALPGWSGVDST
HHHEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHCCCCCCCCCC
RLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKSITVQPPRPKPWEKTYVLLPSFEKV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEECCCCCCCCCCEEEECCCHHHH
KGDKVLYAHASRILHHETNPGCARALMQKHGERYIWINPPAIPLSTEEMDSVFALPYKRV
CCCEEEEHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCHHCC
PHPSYGDARIPAYEMIRFSINIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRD
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCHHHHHHHHHHHHH
TVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRR
HCCCHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
ARELKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGM
HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHCCCC
GSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFY
CCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PSPLANSTTMYYTGKNPLGKIGYKSEEVVVPKGDKQRRLHKALLRYHDPANWPLIRQALE
CCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
AMGKKHLIGSRRDCLVPAPTLDEMREARRQNRHTRPALTKHTPIAHQRQTPAAAGAKKRV
HHCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCHHCC
KPKAVSR
CCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]