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The map label for this gene is yfiM [H]

Identifier: 238896035

GI number: 238896035

Start: 3998322

End: 3998645

Strand: Direct

Name: yfiM [H]

Synonym: KP1_4166

Alternate gene names: 238896035

Gene position: 3998322-3998645 (Clockwise)

Preceding gene: 238896034

Following gene: 238896037

Centisome position: 76.18

GC content: 58.33

Gene sequence:

>324_bases
ATGCGTACGATATTAGTGATTGCTTCGCTGCTGTTAACCGGCTGCAGCCACATGGCAAATGATGCATGGTCCGGTCAGGA
CAAAGCCCAGCATTTTCTGGCCTCAGCGATGCTCTCTGCCGCTGGCAATGAATATGCGCAACATCAGGGTTACAGCCGGG
ACCGCAGCGCCGCTATCGGCCTGATGTTTTCCGTCAGCCTTGGCGCCTCAAAAGAGCTTTGGGACAGCCGCCCGGCTGGG
AGCGGCTGGAGCTGGAAGGATTTTGCCTGGGATGTCGCCGGCGCGACCACCGGCTACGCTGTATGGCAGTTGGCTCATCA
GTAA

Upstream 100 bases:

>100_bases
AACTGATCCGCCGCCTGCGGCGGATCCGCATTGACCGGCTGATCAGCCGTATTCTCTGACTATCAGCCCCGCCTCGACGG
GGCTTTTTTCTGGAAGTGCT

Downstream 100 bases:

>100_bases
GCGTTACAGACGCAACCCCTTCCCTTTGCGATGCAACATCAGGGAGACAAGGAAGGCAATGGCGGCCATCACCGTCACAT
ACCAGTAGAACGCGTGCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MRTILVIASLLLTGCSHMANDAWSGQDKAQHFLASAMLSAAGNEYAQHQGYSRDRSAAIGLMFSVSLGASKELWDSRPAG
SGWSWKDFAWDVAGATTGYAVWQLAHQ

Sequences:

>Translated_107_residues
MRTILVIASLLLTGCSHMANDAWSGQDKAQHFLASAMLSAAGNEYAQHQGYSRDRSAAIGLMFSVSLGASKELWDSRPAG
SGWSWKDFAWDVAGATTGYAVWQLAHQ
>Mature_107_residues
MRTILVIASLLLTGCSHMANDAWSGQDKAQHFLASAMLSAAGNEYAQHQGYSRDRSAAIGLMFSVSLGASKELWDSRPAG
SGWSWKDFAWDVAGATTGYAVWQLAHQ

Specific function: Unknown

COG id: COG5544

COG function: function code R; Predicted periplasmic lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI145693173, Length=107, Percent_Identity=81.3084112149533, Blast_Score=182, Evalue=3e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018736
- InterPro:   IPR017028 [H]

Pfam domain/function: PF10043 DUF2279 [H]

EC number: NA

Molecular weight: Translated: 11549; Mature: 11549

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTILVIASLLLTGCSHMANDAWSGQDKAQHFLASAMLSAAGNEYAQHQGYSRDRSAAIG
CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHH
LMFSVSLGASKELWDSRPAGSGWSWKDFAWDVAGATTGYAVWQLAHQ
HHEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MRTILVIASLLLTGCSHMANDAWSGQDKAQHFLASAMLSAAGNEYAQHQGYSRDRSAAIG
CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHH
LMFSVSLGASKELWDSRPAGSGWSWKDFAWDVAGATTGYAVWQLAHQ
HHEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 2002065; 2118499; 7567469 [H]