Definition | Klebsiella pneumoniae NTUH-K2044 chromosome, complete genome. |
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Accession | NC_012731 |
Length | 5,248,520 |
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The map label for this gene is hdaH [H]
Identifier: 238893553
GI number: 238893553
Start: 1398567
End: 1399682
Strand: Direct
Name: hdaH [H]
Synonym: KP1_1457
Alternate gene names: 238893553
Gene position: 1398567-1399682 (Clockwise)
Preceding gene: 238893552
Following gene: 238893558
Centisome position: 26.65
GC content: 62.9
Gene sequence:
>1116_bases GTGAAAAGAAAAACCGGTTTCTTTTTTGATGAACGTTGTTTCTGGCACAGTACCGGTCTGCACGCGGTGACGCTGCCAGT GGGCGGGTGGGTACAGCCGCCCGCCGGCGGCGGTCATGCTGAATCGCCAGAGACCAAACGGCGGATGAAAAACCTGATGG ATGTCTCCGGGCTGACGCCGCAGCTGGCGCTGCGCAGCGCGGCGCCGGCGAGCCTTGAGGACCTGCGGCGGATCCACCCC GACAGCTATCTGGAGCGCTTCAAGGCGATAAGCGATAACGGCGGCGGCATGCTCGGCAAAGAGGCGCCGCTGGGGCCGGG CAGTTATGAAATTGCCTGTCTTTCCGCCGGGCTGGCCTGTGCGGCGGTGGAAGCGGTGCTGAAGGGGGAGCTGGATAACG CCTATTCGCTGTCGCGCCCGCCCGGACACCACTGCCTGCCGGACCAGTCGATGGGATTTTGTTTCCTCGCCAATATTCCC ATTGCCGTCGAGCGAGCGAAAGCGCAGCTGGGGCTGGGCAAGGTGGCGATCATTGACTGGGATGTTCACCACGGTAACGG CACCCAGCATATCTACCTGCAGCGCGACGATGTACTGACTATCTCCTTGCATCAGGACGGCTGCTTCCCGCCGGGCTACG CCGGCGAGGACGATCGCGGCGTGGGTGCGGGCGAAGGTTACAACATCAATATTCCGCTGTTGGCCGGGGCGGGGGATGAC AGCTGGCGCTATGCGCTGGAAACTATCGTTATTCCGGCGCTGGCGCGTTTTGAGCCGGAGCTGATTATTATCGCCTGCGG CTATGACGCCAACGCCATGGATCCATTAGCGCGGATGCAGCTGCACAGCGATAGCTTCCGGGCGATGACCGAACAGGTCC AGCAGGCGGCGGATCGCCTGTGCGGCGGGAAACTGGTGATGGTGCACGAGGGCGGCTACGCCGAATCCTACGTGCCGTTC TGCGGCCTGGCGGTGATGGAAGCCCTGAGCGGCATCCGCACTGAGGTCCAGGATCCGCTGCTGGAATTTATTCAGCAGCA GCAGCCGCGCGCCGCATTCGCGCAGTTCCAGCGCCAGGCCATCGATCGGCTGGCGCAGCAGTTTGGCCTGCTATAA
Upstream 100 bases:
>100_bases ATCTGGTGATCGGCGGCGGCAGGCGTCTGCGCGCTGCTGTCACTGATTTTAATTGTGGCGGCGTCCGCCGCCGGGAAGGC TTAGCCCACGGGAGGATAGA
Downstream 100 bases:
>100_bases ACCACCTCAGCTTCCCCGCGGTGATGGCGGGGAAGTCAATGCTTTCTCTTCTGCGATTTCACCGCGCATCCACTGACTTA CCGCCTGATTAACCATCGCC
Product: putative deacetylase
Products: NA
Alternate protein names: HDAC-like amidohydrolase; HDAH [H]
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MKRKTGFFFDERCFWHSTGLHAVTLPVGGWVQPPAGGGHAESPETKRRMKNLMDVSGLTPQLALRSAAPASLEDLRRIHP DSYLERFKAISDNGGGMLGKEAPLGPGSYEIACLSAGLACAAVEAVLKGELDNAYSLSRPPGHHCLPDQSMGFCFLANIP IAVERAKAQLGLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQDGCFPPGYAGEDDRGVGAGEGYNINIPLLAGAGDD SWRYALETIVIPALARFEPELIIIACGYDANAMDPLARMQLHSDSFRAMTEQVQQAADRLCGGKLVMVHEGGYAESYVPF CGLAVMEALSGIRTEVQDPLLEFIQQQQPRAAFAQFQRQAIDRLAQQFGLL
Sequences:
>Translated_371_residues MKRKTGFFFDERCFWHSTGLHAVTLPVGGWVQPPAGGGHAESPETKRRMKNLMDVSGLTPQLALRSAAPASLEDLRRIHP DSYLERFKAISDNGGGMLGKEAPLGPGSYEIACLSAGLACAAVEAVLKGELDNAYSLSRPPGHHCLPDQSMGFCFLANIP IAVERAKAQLGLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQDGCFPPGYAGEDDRGVGAGEGYNINIPLLAGAGDD SWRYALETIVIPALARFEPELIIIACGYDANAMDPLARMQLHSDSFRAMTEQVQQAADRLCGGKLVMVHEGGYAESYVPF CGLAVMEALSGIRTEVQDPLLEFIQQQQPRAAFAQFQRQAIDRLAQQFGLL >Mature_371_residues MKRKTGFFFDERCFWHSTGLHAVTLPVGGWVQPPAGGGHAESPETKRRMKNLMDVSGLTPQLALRSAAPASLEDLRRIHP DSYLERFKAISDNGGGMLGKEAPLGPGSYEIACLSAGLACAAVEAVLKGELDNAYSLSRPPGHHCLPDQSMGFCFLANIP IAVERAKAQLGLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQDGCFPPGYAGEDDRGVGAGEGYNINIPLLAGAGDD SWRYALETIVIPALARFEPELIIIACGYDANAMDPLARMQLHSDSFRAMTEQVQQAADRLCGGKLVMVHEGGYAESYVPF CGLAVMEALSGIRTEVQDPLLEFIQQQQPRAAFAQFQRQAIDRLAQQFGLL
Specific function: Exhibits significant levels of protein deacetylase activity comparable to those of eukaryotic HDACs in assays both with fluorogenic peptidic substrates and acetate-radiolabeled histones. Accepts proteins with epsilon-acetylated lysine residues and tritiat
COG id: COG0123
COG function: function code BQ; Deacetylases, including yeast histone deacetylase and acetoin utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histone deacetylase family [H]
Homologues:
Organism=Homo sapiens, GI153085395, Length=248, Percent_Identity=35.4838709677419, Blast_Score=151, Evalue=8e-37, Organism=Homo sapiens, GI148539870, Length=348, Percent_Identity=31.8965517241379, Blast_Score=150, Evalue=1e-36, Organism=Homo sapiens, GI169234807, Length=348, Percent_Identity=31.8965517241379, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI13128864, Length=287, Percent_Identity=32.0557491289199, Blast_Score=149, Evalue=6e-36, Organism=Homo sapiens, GI17158039, Length=246, Percent_Identity=35.7723577235772, Blast_Score=148, Evalue=8e-36, Organism=Homo sapiens, GI30795202, Length=246, Percent_Identity=35.7723577235772, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI30795204, Length=246, Percent_Identity=35.7723577235772, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI62750349, Length=232, Percent_Identity=36.2068965517241, Blast_Score=138, Evalue=7e-33, Organism=Homo sapiens, GI62750347, Length=232, Percent_Identity=36.2068965517241, Blast_Score=138, Evalue=7e-33, Organism=Homo sapiens, GI20070354, Length=289, Percent_Identity=32.1799307958478, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI13128860, Length=315, Percent_Identity=26.6666666666667, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI293336691, Length=256, Percent_Identity=27.34375, Blast_Score=109, Evalue=5e-24, Organism=Homo sapiens, GI226529806, Length=289, Percent_Identity=30.1038062283737, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI8923769, Length=251, Percent_Identity=25.0996015936255, Blast_Score=105, Evalue=7e-23, Organism=Homo sapiens, GI13128862, Length=356, Percent_Identity=25.561797752809, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI262073092, Length=223, Percent_Identity=26.0089686098655, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI262073088, Length=181, Percent_Identity=26.5193370165746, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17540334, Length=309, Percent_Identity=32.6860841423948, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI193206283, Length=309, Percent_Identity=32.6860841423948, Blast_Score=155, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17540332, Length=309, Percent_Identity=32.6860841423948, Blast_Score=155, Evalue=2e-38, Organism=Caenorhabditis elegans, GI193209491, Length=293, Percent_Identity=31.740614334471, Blast_Score=132, Evalue=3e-31, Organism=Caenorhabditis elegans, GI17508561, Length=316, Percent_Identity=30.379746835443, Blast_Score=127, Evalue=6e-30, Organism=Caenorhabditis elegans, GI17561978, Length=300, Percent_Identity=30.6666666666667, Blast_Score=124, Evalue=6e-29, Organism=Caenorhabditis elegans, GI17534739, Length=263, Percent_Identity=28.8973384030418, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17537347, Length=216, Percent_Identity=32.8703703703704, Blast_Score=98, Evalue=6e-21, Organism=Caenorhabditis elegans, GI25154020, Length=214, Percent_Identity=28.5046728971963, Blast_Score=96, Evalue=3e-20, Organism=Caenorhabditis elegans, GI25154022, Length=214, Percent_Identity=28.0373831775701, Blast_Score=92, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6324307, Length=363, Percent_Identity=31.129476584022, Blast_Score=152, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6323999, Length=358, Percent_Identity=24.8603351955307, Blast_Score=118, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6321244, Length=294, Percent_Identity=26.1904761904762, Blast_Score=97, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6325325, Length=200, Percent_Identity=26.5, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI281360899, Length=307, Percent_Identity=32.8990228013029, Blast_Score=165, Evalue=4e-41, Organism=Drosophila melanogaster, GI24642142, Length=307, Percent_Identity=32.8990228013029, Blast_Score=165, Evalue=6e-41, Organism=Drosophila melanogaster, GI24642144, Length=307, Percent_Identity=32.8990228013029, Blast_Score=165, Evalue=6e-41, Organism=Drosophila melanogaster, GI24642146, Length=307, Percent_Identity=32.8990228013029, Blast_Score=164, Evalue=6e-41, Organism=Drosophila melanogaster, GI281360799, Length=211, Percent_Identity=36.9668246445498, Blast_Score=137, Evalue=8e-33, Organism=Drosophila melanogaster, GI24641720, Length=211, Percent_Identity=36.9668246445498, Blast_Score=137, Evalue=9e-33, Organism=Drosophila melanogaster, GI281360801, Length=211, Percent_Identity=36.9668246445498, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI24657891, Length=297, Percent_Identity=28.6195286195286, Blast_Score=111, Evalue=7e-25, Organism=Drosophila melanogaster, GI24644244, Length=263, Percent_Identity=25.4752851711027, Blast_Score=91, Evalue=9e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000286 [H]
Pfam domain/function: PF00850 Hist_deacetyl [H]
EC number: NA
Molecular weight: Translated: 40241; Mature: 40241
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKTGFFFDERCFWHSTGLHAVTLPVGGWVQPPAGGGHAESPETKRRMKNLMDVSGLTP CCCCCCCEECCCEEEECCCCEEEEECCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCH QLALRSAAPASLEDLRRIHPDSYLERFKAISDNGGGMLGKEAPLGPGSYEIACLSAGLAC HHHHHCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHH AAVEAVLKGELDNAYSLSRPPGHHCLPDQSMGFCFLANIPIAVERAKAQLGLGKVAIIDW HHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCEEEEECCCEEEHHHHHHCCCCEEEEEEE DVHHGNGTQHIYLQRDDVLTISLHQDGCFPPGYAGEDDRGVGAGEGYNINIPLLAGAGDD EEECCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC SWRYALETIVIPALARFEPELIIIACGYDANAMDPLARMQLHSDSFRAMTEQVQQAADRL HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHH CGGKLVMVHEGGYAESYVPFCGLAVMEALSGIRTEVQDPLLEFIQQQQPRAAFAQFQRQA CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH IDRLAQQFGLL HHHHHHHHCCC >Mature Secondary Structure MKRKTGFFFDERCFWHSTGLHAVTLPVGGWVQPPAGGGHAESPETKRRMKNLMDVSGLTP CCCCCCCEECCCEEEECCCCEEEEECCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCH QLALRSAAPASLEDLRRIHPDSYLERFKAISDNGGGMLGKEAPLGPGSYEIACLSAGLAC HHHHHCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHH AAVEAVLKGELDNAYSLSRPPGHHCLPDQSMGFCFLANIPIAVERAKAQLGLGKVAIIDW HHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCEEEEECCCEEEHHHHHHCCCCEEEEEEE DVHHGNGTQHIYLQRDDVLTISLHQDGCFPPGYAGEDDRGVGAGEGYNINIPLLAGAGDD EEECCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC SWRYALETIVIPALARFEPELIIIACGYDANAMDPLARMQLHSDSFRAMTEQVQQAADRL HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHH CGGKLVMVHEGGYAESYVPFCGLAVMEALSGIRTEVQDPLLEFIQQQQPRAAFAQFQRQA CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH IDRLAQQFGLL HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA