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The map label for this gene is ybaY [H]

Identifier: 238893403

GI number: 238893403

Start: 1245082

End: 1245573

Strand: Direct

Name: ybaY [H]

Synonym: KP1_1288

Alternate gene names: 238893403

Gene position: 1245082-1245573 (Clockwise)

Preceding gene: 238893401

Following gene: 238893406

Centisome position: 23.72

GC content: 57.93

Gene sequence:

>492_bases
ATGAAATTTGCCTATATGTTTAGTGCCTTAGCCGTCGCCGCGACGCTGACCGCCTGTGCTAATCACCACTCGAACAATTC
TTCGACGCAGGCGGCCACGCCCGACCCTTACGGTATCGCGACGCTGAGCGTGGCGCAGCAGCAGCCGAGCGTCACGGGGA
CGATTAATATCCGCCAGAGAATCGCTTTACCGCCGGATGCGGTACTGACGGTGACCCTGTCGGATGCTTCTCTGGCAGAT
GCGCCAGCCCGCGTATTGTCGCAAAAAGCGGTGCGTACCGAAGGCAAACAGGCGCCATTTAACTTTGCGCTGCCTTACAA
CCCGGCAGATATTCAACCGAACGCTCGCATTCTGCTAAGCGCGGCGATCACGGTTAACGGCCAGTTGATGTTTATTACCG
ATACCGTGCAGACGGTAATAAACCAGGGCGGCACTCATGCCGACCTGACGCTGGTTCCGGTCCAGCAGACCGCCGTTCCT
GTCGCCCAGTAA

Upstream 100 bases:

>100_bases
AATCTGAGATCTGTGCCACACTTATTGACGACACGAAAGTTCCTGCCGGCGAAGCGGCGGAACATCCTCCTGGGTATTAA
GGGATGATAAGGAGAACATC

Downstream 100 bases:

>100_bases
GCTCGCTACGCCCCCGGATGGGGGCTTTTTTTTGCCTTCAATAAACCCAGCGATAATGCTGGAGATCGATATGGCCGCTG
CCGGAGACCTGCACACCCTC

Product: glycoprotein/polysaccharide metabolism

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MKFAYMFSALAVAATLTACANHHSNNSSTQAATPDPYGIATLSVAQQQPSVTGTINIRQRIALPPDAVLTVTLSDASLAD
APARVLSQKAVRTEGKQAPFNFALPYNPADIQPNARILLSAAITVNGQLMFITDTVQTVINQGGTHADLTLVPVQQTAVP
VAQ

Sequences:

>Translated_163_residues
MKFAYMFSALAVAATLTACANHHSNNSSTQAATPDPYGIATLSVAQQQPSVTGTINIRQRIALPPDAVLTVTLSDASLAD
APARVLSQKAVRTEGKQAPFNFALPYNPADIQPNARILLSAAITVNGQLMFITDTVQTVINQGGTHADLTLVPVQQTAVP
VAQ
>Mature_163_residues
MKFAYMFSALAVAATLTACANHHSNNSSTQAATPDPYGIATLSVAQQQPSVTGTINIRQRIALPPDAVLTVTLSDASLAD
APARVLSQKAVRTEGKQAPFNFALPYNPADIQPNARILLSAAITVNGQLMFITDTVQTVINQGGTHADLTLVPVQQTAVP
VAQ

Specific function: Unknown

COG id: COG3126

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786658, Length=165, Percent_Identity=68.4848484848485, Blast_Score=199, Evalue=5e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17080; Mature: 17080

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFAYMFSALAVAATLTACANHHSNNSSTQAATPDPYGIATLSVAQQQPSVTGTINIRQR
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEEE
IALPPDAVLTVTLSDASLADAPARVLSQKAVRTEGKQAPFNFALPYNPADIQPNARILLS
ECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEE
AAITVNGQLMFITDTVQTVINQGGTHADLTLVPVQQTAVPVAQ
EEEEECCEEEEEEHHHHHHHHCCCCCCEEEEEECHHCCCCCCC
>Mature Secondary Structure
MKFAYMFSALAVAATLTACANHHSNNSSTQAATPDPYGIATLSVAQQQPSVTGTINIRQR
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEEE
IALPPDAVLTVTLSDASLADAPARVLSQKAVRTEGKQAPFNFALPYNPADIQPNARILLS
ECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEE
AAITVNGQLMFITDTVQTVINQGGTHADLTLVPVQQTAVPVAQ
EEEEECCEEEEEEHHHHHHHHCCCCCCEEEEEECHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]