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The map label for this gene is yagV [H]

Identifier: 238893277

GI number: 238893277

Start: 1119980

End: 1120720

Strand: Direct

Name: yagV [H]

Synonym: KP1_1150

Alternate gene names: 238893277

Gene position: 1119980-1120720 (Clockwise)

Preceding gene: 238893276

Following gene: 238893290

Centisome position: 21.34

GC content: 61.54

Gene sequence:

>741_bases
TTGGCGAAGTCAGCGCTTCAGGAGAGATTCATGTCCAGGCGACGTGGCGCAACATTAACTAAGGCCCTGCTGACGGTGGG
CTGCCTGCTGGCAGCGCCGCTGGCGCAGGCGATCTCGGTCGGCAACCTGACCTTTTCCCTGCCGGCTGAAGCGGATTTCG
CCAGCAAACGGGTGGTCAACAACAATAAAAGCGCGCGGCTGTACCGCATCGCCGTCAGCGCCATCGATCGCCCGGGCGGC
AGCGAAGTCCGCTCCCGGCCGGTGGATGGCGAACTGCTGTTCGCCCCCCGCCAGCTGGTGCTGCAGGCAGGTGAGAGCGA
GTATTTTAAATTTTACTATCATGGGCCGCGGGATAACCGCGAGCGCTACTATCGGGTCTCGTTTCGCGAAATCCCCACCC
GCAACCTGACGAGGCGCAGCCCGACCGGCGGCGAGGTCAGCATGGAGCCGGTGGTGGTGATGGATACCATTCTGGTGGTG
CGCCCGCGCGAGGTACAGTTTAAATGGTCTTTCGATAAGGTGGCCGGGACGGTGAGCAACACCGGCAATACCTGGTTTAA
GCTGCTGATTAAGCCCGGATGCGATTCGACCGAAGAGGAGGGGGACGCCTGGTATCTGCGTCCCGGGGACGTGGTTCGCC
AGCCGGCGCTGCGCCAGCCGGGGAACCACTATCTGGTCTATAACGACAAATTTATTAAGATCAGCGATACCTGTCCGCTG
AAGCCCCGTCCCGCGGAGTGA

Upstream 100 bases:

>100_bases
ATCTCCGGCGAAGTGGGGCAGATGGATAAGACCACGGTGAAATTTTCGATTCCGATGGATAATGCCATTTCGCTGCGGAC
GGTAGACGATAACGGCTGGT

Downstream 100 bases:

>100_bases
GCCTTATCTGGTGGTCGCGCGGCGGGTAAAGCGCCGGCTGGCCAGCAGGCTCAGACCGCAGCACAGCAGGTAGTACACCG
CGCCGGTGAAGACGAAGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MAKSALQERFMSRRRGATLTKALLTVGCLLAAPLAQAISVGNLTFSLPAEADFASKRVVNNNKSARLYRIAVSAIDRPGG
SEVRSRPVDGELLFAPRQLVLQAGESEYFKFYYHGPRDNRERYYRVSFREIPTRNLTRRSPTGGEVSMEPVVVMDTILVV
RPREVQFKWSFDKVAGTVSNTGNTWFKLLIKPGCDSTEEEGDAWYLRPGDVVRQPALRQPGNHYLVYNDKFIKISDTCPL
KPRPAE

Sequences:

>Translated_246_residues
MAKSALQERFMSRRRGATLTKALLTVGCLLAAPLAQAISVGNLTFSLPAEADFASKRVVNNNKSARLYRIAVSAIDRPGG
SEVRSRPVDGELLFAPRQLVLQAGESEYFKFYYHGPRDNRERYYRVSFREIPTRNLTRRSPTGGEVSMEPVVVMDTILVV
RPREVQFKWSFDKVAGTVSNTGNTWFKLLIKPGCDSTEEEGDAWYLRPGDVVRQPALRQPGNHYLVYNDKFIKISDTCPL
KPRPAE
>Mature_245_residues
AKSALQERFMSRRRGATLTKALLTVGCLLAAPLAQAISVGNLTFSLPAEADFASKRVVNNNKSARLYRIAVSAIDRPGGS
EVRSRPVDGELLFAPRQLVLQAGESEYFKFYYHGPRDNRERYYRVSFREIPTRNLTRRSPTGGEVSMEPVVVMDTILVVR
PREVQFKWSFDKVAGTVSNTGNTWFKLLIKPGCDSTEEEGDAWYLRPGDVVRQPALRQPGNHYLVYNDKFIKISDTCPLK
PRPAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the matC family [H]

Homologues:

Organism=Escherichia coli, GI87081712, Length=236, Percent_Identity=87.7118644067797, Blast_Score=437, Evalue=1e-124,
Organism=Escherichia coli, GI1786485, Length=224, Percent_Identity=29.4642857142857, Blast_Score=74, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008962
- InterPro:   IPR016147 [H]

Pfam domain/function: PF00345 Pili_assembly_N [H]

EC number: NA

Molecular weight: Translated: 27713; Mature: 27582

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSALQERFMSRRRGATLTKALLTVGCLLAAPLAQAISVGNLTFSLPAEADFASKRVVN
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHC
NNKSARLYRIAVSAIDRPGGSEVRSRPVDGELLFAPRQLVLQAGESEYFKFYYHGPRDNR
CCCCCEEEEEEEEHHCCCCCHHHHCCCCCCEEEECCHHHHHHCCCCCEEEEEEECCCCCC
ERYYRVSFREIPTRNLTRRSPTGGEVSMEPVVVMDTILVVRPREVQFKWSFDKVAGTVSN
CEEEEEEHHHCCCCCCCCCCCCCCCEECCCEEEEEEEEEECCCEEEEEEEHHHHHEECCC
TGNTWFKLLIKPGCDSTEEEGDAWYLRPGDVVRQPALRQPGNHYLVYNDKFIKISDTCPL
CCCEEEEEEECCCCCCCCCCCCEEEECCCHHHHCCCCCCCCCEEEEECCEEEEECCCCCC
KPRPAE
CCCCCC
>Mature Secondary Structure 
AKSALQERFMSRRRGATLTKALLTVGCLLAAPLAQAISVGNLTFSLPAEADFASKRVVN
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHC
NNKSARLYRIAVSAIDRPGGSEVRSRPVDGELLFAPRQLVLQAGESEYFKFYYHGPRDNR
CCCCCEEEEEEEEHHCCCCCHHHHCCCCCCEEEECCHHHHHHCCCCCEEEEEEECCCCCC
ERYYRVSFREIPTRNLTRRSPTGGEVSMEPVVVMDTILVVRPREVQFKWSFDKVAGTVSN
CEEEEEEHHHCCCCCCCCCCCCCCCEECCCEEEEEEEEEECCCEEEEEEEHHHHHEECCC
TGNTWFKLLIKPGCDSTEEEGDAWYLRPGDVVRQPALRQPGNHYLVYNDKFIKISDTCPL
CCCEEEEEEECCCCCCCCCCCCEEEECCCHHHHCCCCCCCCCEEEEECCEEEEECCCCCC
KPRPAE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]