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The map label for this gene is panD [H]

Identifier: 238893118

GI number: 238893118

Start: 950172

End: 950552

Strand: Reverse

Name: panD [H]

Synonym: KP1_0966

Alternate gene names: 238893118

Gene position: 950552-950172 (Counterclockwise)

Preceding gene: 238893119

Following gene: 238893113

Centisome position: 18.11

GC content: 57.74

Gene sequence:

>381_bases
ATGATGCGTAATATGCTGCAGGGCAAGCTCCACCGCGTAAAAGTCACGCAGGCGGACCTGCACTATGAAGGTTCTTGCGC
CATTGACCAGGACTTCCTGGATGCGGCCGGTATTCTGGAGAATGAAACTATTCACCTCTGGAACGTCACCAACGGCAACC
GTTTCTCCACCTACGCCATTGCCGCCGAGCGGGGCTCCCGGATCATCTCCGTTAACGGCGCCGCCGCGCACTGCGCCAGC
GTCGGCGATATTTTGATCATCGCCAGCTTCGTTACCATGTCGGACGAAGAGGCGCGCAGCTGGCAACCTAACATCGCCTA
CTTCGAAGGCGACAACGAAATGAAGCGCCAGGCGAAAGCTATTCCGGTACAGGTCGCCTGA

Upstream 100 bases:

>100_bases
CTCAGTAGACAGCGGGTAAAAATCGGGCAATACTGCCCGGGCTTTTCTCAGGGCGGGCGCCGTGTCCGCTCTGCTACATT
AAGGTTGAAGGGTAGAAGTT

Downstream 100 bases:

>100_bases
TGGCCGCGACGCTGCGCTCAGGCGCAGCGTCGGTATTACCCCTGCGGCTGGTTACTGATCAGCCGCGACATCGTCTCCAG
CGAATCCGTGCGTAAGATAT

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase [H]

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MMRNMLQGKLHRVKVTQADLHYEGSCAIDQDFLDAAGILENETIHLWNVTNGNRFSTYAIAAERGSRIISVNGAAAHCAS
VGDILIIASFVTMSDEEARSWQPNIAYFEGDNEMKRQAKAIPVQVA

Sequences:

>Translated_126_residues
MMRNMLQGKLHRVKVTQADLHYEGSCAIDQDFLDAAGILENETIHLWNVTNGNRFSTYAIAAERGSRIISVNGAAAHCAS
VGDILIIASFVTMSDEEARSWQPNIAYFEGDNEMKRQAKAIPVQVA
>Mature_126_residues
MMRNMLQGKLHRVKVTQADLHYEGSCAIDQDFLDAAGILENETIHLWNVTNGNRFSTYAIAAERGSRIISVNGAAAHCAS
VGDILIIASFVTMSDEEARSWQPNIAYFEGDNEMKRQAKAIPVQVA

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine [H]

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family [H]

Homologues:

Organism=Escherichia coli, GI1786323, Length=126, Percent_Identity=89.6825396825397, Blast_Score=241, Evalue=1e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003190
- ProDom:   PD009294 [H]

Pfam domain/function: PF02261 Asp_decarbox [H]

EC number: =4.1.1.11 [H]

Molecular weight: Translated: 13897; Mature: 13897

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: PS00678 WD_REPEATS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRNMLQGKLHRVKVTQADLHYEGSCAIDQDFLDAAGILENETIHLWNVTNGNRFSTYAI
CCCCHHHCCEEEEEEEECCCEECCCCEECHHHHHHCCCCCCCEEEEEECCCCCEEEEEEE
AAERGSRIISVNGAAAHCASVGDILIIASFVTMSDEEARSWQPNIAYFEGDNEMKRQAKA
EECCCCEEEEECCCHHHHHCCCCEEEEEEHHHCCCCHHHCCCCCEEEEECCHHHHHHHHC
IPVQVA
CCEEEC
>Mature Secondary Structure
MMRNMLQGKLHRVKVTQADLHYEGSCAIDQDFLDAAGILENETIHLWNVTNGNRFSTYAI
CCCCHHHCCEEEEEEEECCCEECCCCEECHHHHHHCCCCCCCEEEEEECCCCCEEEEEEE
AAERGSRIISVNGAAAHCASVGDILIIASFVTMSDEEARSWQPNIAYFEGDNEMKRQAKA
EECCCCEEEEECCCHHHHHCCCCEEEEEEHHHCCCCHHHCCCCCEEEEECCHHHHHHHHC
IPVQVA
CCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA