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The map label for this gene is yaaJ [H]

Identifier: 238892994

GI number: 238892994

Start: 804209

End: 805639

Strand: Reverse

Name: yaaJ [H]

Synonym: KP1_0826

Alternate gene names: 238892994

Gene position: 805639-804209 (Counterclockwise)

Preceding gene: 238892998

Following gene: 238892993

Centisome position: 15.35

GC content: 60.52

Gene sequence:

>1431_bases
ATGCCTGATTTTCTCTCATTTATCAATGAAATACTCTGGGGCTCAGTGATGATTTATCTGCTACTGGGCGCCGGTATCTG
GTTTAGCTGGCAAACCCGGGGTATTCAGTTTCGTTACGTGCGCAAATTCGGCCGCAGTCTAAAAAAAAGCCTGCACCCGC
AGCCGGGTGGTTTAACGTCCTTTCAGGCGCTCTGTACCAGCCTTGCCGCCCGGGTCGGCAGCGGCAATCTTGCCGGGGTG
ACGCTGGCGATCGCCGCCGGTGGGCCCGGCGCCGTATTCTGGATGTGGGTTTCCGCCCTGCTCGGCATGGCCAGCAGCTT
TGCTGAATGTTCCCTTGCTCAGCTGTATAAAGAACGCGATAGCCGCGGACAGTTTCGCGGTGGCCCTGCCTGGTACATGG
CGCGCGGGCTCGGCATGCGTTGGATGGGCGTCCTGTTTTCGATCCTCCTCCTGCTGGCCTATGGTTTTATCTTCAATACC
GTGCAGGCTAACTCCGTGGCCCATGCCTTGCGCTATGCGTTCGATCTGCCGGCGGCGGTCAGCGGCGGCGTGCTGGCCGT
TGTCGTTTTGCTGGCGATCCTCCGTGGTTTACGCGGCGTGGCGCGTCTGATGCAATGGATCGTTCCCTTTATGGCGCTGT
TGTGGATCGCCACCAGCCTGCTCATCGGCCTGTGGCACATCACCGCCCTGCCGACGATTTTCGCCACCATCTTTCGCTGC
GCCTTCGGCTGGCAGGAGGCCGCCGCCGGCGCGGTGGGCTACACCATCAGCCAGGCGCTGACCAGCGGCTTCCAGCGCGG
CATGTTCTCCAATGAAGCAGGGATGGGCTCTTCGCCTAACGCCGCCGCGGCCGCCGCCTCCTGGCCGCCGCACCCGGCGG
CGCAGGGGATCGTGCAGATGATTGGCGTGTTTATCGATACTATCGTGATCTGTACCGCCAGCGCGATTATCGTCATGCTG
GCGCCGCGGCCCGACAATGAATATACGCTCAACGGTATTCAGGACTTGCAACACGCGATGAGCGTGCTGGTCGGCGGCTG
GGGAGCGGGTTTTATCGCCCTCATCGTGCTGCTGTTCGCCTTTAGCTCTATCGTAGCCAATTACGTGTACGCGGAAAATA
ATCTGGTCTTCCTGCGCCTGGATAAGCCCCGCTATATCTGGGGGCTGCGAATACTCACCGTCCTGATGGTGCTGTTGGGG
ACCATGGTTAGCCTGCCTGTCGTCTGGCAGAGCGCGGATATCATCATGGCGCTGATGGCGATGACCAACCTGACGGCCAT
TCTGCTGCTCTCCCCGACGGTGCGGATTATCGCCAGCGATTATCTGCGTCAGCGGCGGCTGGGTATCCAGCCGACTTTCG
ATGCCACTCGTTACCCGGATATTGACCAACAGCTGGCCCCGGGCGCCTGGAATGAATTGCCGCGCGAATAG

Upstream 100 bases:

>100_bases
GTGTGATAAACTATGCAGATTAATTTGCTGAAAGCGAAAGGATTGTCACTTAATTGGTAACGCTTACACTGGCGTGCCGG
CATGGACAAGAGGATGTTTA

Downstream 100 bases:

>100_bases
CGCGGCAATTGTAGCTATCGATCCCACCATGCACTTTTTTTGTTAAAATTCGTCGAAATTACCTGCAAGGACTGGATATG
CTGATTCTGATTTCACCTGC

Product: inner membrane transport protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 475

Protein sequence:

>476_residues
MPDFLSFINEILWGSVMIYLLLGAGIWFSWQTRGIQFRYVRKFGRSLKKSLHPQPGGLTSFQALCTSLAARVGSGNLAGV
TLAIAAGGPGAVFWMWVSALLGMASSFAECSLAQLYKERDSRGQFRGGPAWYMARGLGMRWMGVLFSILLLLAYGFIFNT
VQANSVAHALRYAFDLPAAVSGGVLAVVVLLAILRGLRGVARLMQWIVPFMALLWIATSLLIGLWHITALPTIFATIFRC
AFGWQEAAAGAVGYTISQALTSGFQRGMFSNEAGMGSSPNAAAAAASWPPHPAAQGIVQMIGVFIDTIVICTASAIIVML
APRPDNEYTLNGIQDLQHAMSVLVGGWGAGFIALIVLLFAFSSIVANYVYAENNLVFLRLDKPRYIWGLRILTVLMVLLG
TMVSLPVVWQSADIIMALMAMTNLTAILLLSPTVRIIASDYLRQRRLGIQPTFDATRYPDIDQQLAPGAWNELPRE

Sequences:

>Translated_476_residues
MPDFLSFINEILWGSVMIYLLLGAGIWFSWQTRGIQFRYVRKFGRSLKKSLHPQPGGLTSFQALCTSLAARVGSGNLAGV
TLAIAAGGPGAVFWMWVSALLGMASSFAECSLAQLYKERDSRGQFRGGPAWYMARGLGMRWMGVLFSILLLLAYGFIFNT
VQANSVAHALRYAFDLPAAVSGGVLAVVVLLAILRGLRGVARLMQWIVPFMALLWIATSLLIGLWHITALPTIFATIFRC
AFGWQEAAAGAVGYTISQALTSGFQRGMFSNEAGMGSSPNAAAAAASWPPHPAAQGIVQMIGVFIDTIVICTASAIIVML
APRPDNEYTLNGIQDLQHAMSVLVGGWGAGFIALIVLLFAFSSIVANYVYAENNLVFLRLDKPRYIWGLRILTVLMVLLG
TMVSLPVVWQSADIIMALMAMTNLTAILLLSPTVRIIASDYLRQRRLGIQPTFDATRYPDIDQQLAPGAWNELPRE
>Mature_475_residues
PDFLSFINEILWGSVMIYLLLGAGIWFSWQTRGIQFRYVRKFGRSLKKSLHPQPGGLTSFQALCTSLAARVGSGNLAGVT
LAIAAGGPGAVFWMWVSALLGMASSFAECSLAQLYKERDSRGQFRGGPAWYMARGLGMRWMGVLFSILLLLAYGFIFNTV
QANSVAHALRYAFDLPAAVSGGVLAVVVLLAILRGLRGVARLMQWIVPFMALLWIATSLLIGLWHITALPTIFATIFRCA
FGWQEAAAGAVGYTISQALTSGFQRGMFSNEAGMGSSPNAAAAAASWPPHPAAQGIVQMIGVFIDTIVICTASAIIVMLA
PRPDNEYTLNGIQDLQHAMSVLVGGWGAGFIALIVLLFAFSSIVANYVYAENNLVFLRLDKPRYIWGLRILTVLMVLLGT
MVSLPVVWQSADIIMALMAMTNLTAILLLSPTVRIIASDYLRQRRLGIQPTFDATRYPDIDQQLAPGAWNELPRE

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=476, Percent_Identity=70.7983193277311, Blast_Score=656, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 51750; Mature: 51619

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDFLSFINEILWGSVMIYLLLGAGIWFSWQTRGIQFRYVRKFGRSLKKSLHPQPGGLTS
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHH
FQALCTSLAARVGSGNLAGVTLAIAAGGPGAVFWMWVSALLGMASSFAECSLAQLYKERD
HHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRGQFRGGPAWYMARGLGMRWMGVLFSILLLLAYGFIFNTVQANSVAHALRYAFDLPAAV
CCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
SGGVLAVVVLLAILRGLRGVARLMQWIVPFMALLWIATSLLIGLWHITALPTIFATIFRC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFGWQEAAAGAVGYTISQALTSGFQRGMFSNEAGMGSSPNAAAAAASWPPHPAAQGIVQM
HHCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
IGVFIDTIVICTASAIIVMLAPRPDNEYTLNGIQDLQHAMSVLVGGWGAGFIALIVLLFA
HHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
FSSIVANYVYAENNLVFLRLDKPRYIWGLRILTVLMVLLGTMVSLPVVWQSADIIMALMA
HHHHHHHHHEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTNLTAILLLSPTVRIIASDYLRQRRLGIQPTFDATRYPDIDQQLAPGAWNELPRE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC
>Mature Secondary Structure 
PDFLSFINEILWGSVMIYLLLGAGIWFSWQTRGIQFRYVRKFGRSLKKSLHPQPGGLTS
CHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHH
FQALCTSLAARVGSGNLAGVTLAIAAGGPGAVFWMWVSALLGMASSFAECSLAQLYKERD
HHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRGQFRGGPAWYMARGLGMRWMGVLFSILLLLAYGFIFNTVQANSVAHALRYAFDLPAAV
CCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
SGGVLAVVVLLAILRGLRGVARLMQWIVPFMALLWIATSLLIGLWHITALPTIFATIFRC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFGWQEAAAGAVGYTISQALTSGFQRGMFSNEAGMGSSPNAAAAAASWPPHPAAQGIVQM
HHCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
IGVFIDTIVICTASAIIVMLAPRPDNEYTLNGIQDLQHAMSVLVGGWGAGFIALIVLLFA
HHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
FSSIVANYVYAENNLVFLRLDKPRYIWGLRILTVLMVLLGTMVSLPVVWQSADIIMALMA
HHHHHHHHHEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTNLTAILLLSPTVRIIASDYLRQRRLGIQPTFDATRYPDIDQQLAPGAWNELPRE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1630901; 9278503 [H]