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The map label for this gene is nahR [H]

Identifier: 238892887

GI number: 238892887

Start: 698955

End: 699863

Strand: Direct

Name: nahR [H]

Synonym: KP1_0707

Alternate gene names: 238892887

Gene position: 698955-699863 (Clockwise)

Preceding gene: 238892885

Following gene: 238892888

Centisome position: 13.32

GC content: 65.79

Gene sequence:

>909_bases
GTGATTAATTTACAGCGTCTGGATCTCAATCTGTTGCGCACCCTGGATGTGCTGCTTAGCGAAAACAACGTTACCCGGGC
GGCGCAGCGGCTGAATCTGTCGCAGCCCTCGGTGAGTATTCAGCTCGCCAGGCTGCGGGAGATTTTCGCCGATCCGCTGC
TGATGCCGGGCCCGCGCGGCATGCAGCCCACCGCCCGCGCCGATGAGCTTCGCCAGCCGCTGCGCGCCGCATTAGCCGCG
CTGGAGCAGGCGGTGGCGCCGGTCAGCCCTTTTGATCCGGCCACGGCGGCGGAGACCTGGCGGGTGGCGGCGACGGACTA
TATGGCCTCGGCGATCCTCCTGCCGATGCTGGCTGGGTTACGCCAGGCCTCTCCCGGCAGTCGGCTGGCGGTATTCGAAT
TACAGCCGGCGCGGCTGGAGCAGCAGGCGGCCAGCGATACAGTAGATCTCTTCTTTCATACCCGCGAGGGCGCGCCGCCG
GGGCTGCATCAGCGCCTGCTGTTTCGCGAACGCTACGTGCTGGCTGGACGGGCGGAACATCCAGCGCTGCGGCCTGGGCT
TAGCCTGGAAACGTTCTGTCAGCTGGAGCACGTGATCGTCTCCCCGGACGGGGGCGGCTTCAGCGCGGCGACCGATATCG
CGCTGGCGAACCTCGGACTGACGCGGCGGGTTGTCCTTTCCGTGCCATATTTCCTGTTTATGCTGGAGACCCTGCGCAAT
AGCGATCTGGTGGCGGTCCTGCCGGAGCGGCTGGTGCGCGGGCAGAGCGGGCTGGTGGTCGTCGAGCCGCCGCTGGCGGT
CGCCGGCTTTGAGATGCTGATGCTGTGGCACGAGCGCTGGCACCGCGACCCGGCGCATCAATGGCTGCGTCAGTTCATTG
TGAATTCACTGGAGGAACAGACATGCTGA

Upstream 100 bases:

>100_bases
AGCAGTACTTTCATAATATCACCTCTGGCGTATGGAGAGCTGCAGAGTAGGAAAGCTGACGCTATAGTAGAAATTAATTA
CTTAAATTACCGGTATAGTC

Downstream 100 bases:

>100_bases
GTGGACTGAATCACCTGACCCTGGCAGTCAGCCAGCTGGCGCCGAGCGTGGCGTTTTATCAGCAGCTGCTGGGCATGACG
CTGCATGCCCGCTGGGACAG

Product: putative LysR family regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MINLQRLDLNLLRTLDVLLSENNVTRAAQRLNLSQPSVSIQLARLREIFADPLLMPGPRGMQPTARADELRQPLRAALAA
LEQAVAPVSPFDPATAAETWRVAATDYMASAILLPMLAGLRQASPGSRLAVFELQPARLEQQAASDTVDLFFHTREGAPP
GLHQRLLFRERYVLAGRAEHPALRPGLSLETFCQLEHVIVSPDGGGFSAATDIALANLGLTRRVVLSVPYFLFMLETLRN
SDLVAVLPERLVRGQSGLVVVEPPLAVAGFEMLMLWHERWHRDPAHQWLRQFIVNSLEEQTC

Sequences:

>Translated_302_residues
MINLQRLDLNLLRTLDVLLSENNVTRAAQRLNLSQPSVSIQLARLREIFADPLLMPGPRGMQPTARADELRQPLRAALAA
LEQAVAPVSPFDPATAAETWRVAATDYMASAILLPMLAGLRQASPGSRLAVFELQPARLEQQAASDTVDLFFHTREGAPP
GLHQRLLFRERYVLAGRAEHPALRPGLSLETFCQLEHVIVSPDGGGFSAATDIALANLGLTRRVVLSVPYFLFMLETLRN
SDLVAVLPERLVRGQSGLVVVEPPLAVAGFEMLMLWHERWHRDPAHQWLRQFIVNSLEEQTC
>Mature_302_residues
MINLQRLDLNLLRTLDVLLSENNVTRAAQRLNLSQPSVSIQLARLREIFADPLLMPGPRGMQPTARADELRQPLRAALAA
LEQAVAPVSPFDPATAAETWRVAATDYMASAILLPMLAGLRQASPGSRLAVFELQPARLEQQAASDTVDLFFHTREGAPP
GLHQRLLFRERYVLAGRAEHPALRPGLSLETFCQLEHVIVSPDGGGFSAATDIALANLGLTRRVVLSVPYFLFMLETLRN
SDLVAVLPERLVRGQSGLVVVEPPLAVAGFEMLMLWHERWHRDPAHQWLRQFIVNSLEEQTC

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081684, Length=302, Percent_Identity=28.8079470198675, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI1790147, Length=299, Percent_Identity=26.0869565217391, Blast_Score=71, Evalue=9e-14,
Organism=Escherichia coli, GI87081766, Length=248, Percent_Identity=24.5967741935484, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33494; Mature: 33494

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINLQRLDLNLLRTLDVLLSENNVTRAAQRLNLSQPSVSIQLARLREIFADPLLMPGPRG
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
MQPTARADELRQPLRAALAALEQAVAPVSPFDPATAAETWRVAATDYMASAILLPMLAGL
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RQASPGSRLAVFELQPARLEQQAASDTVDLFFHTREGAPPGLHQRLLFRERYVLAGRAEH
HCCCCCCEEEEEECCHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCC
PALRPGLSLETFCQLEHVIVSPDGGGFSAATDIALANLGLTRRVVLSVPYFLFMLETLRN
CCCCCCCCHHHHHCEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
SDLVAVLPERLVRGQSGLVVVEPPLAVAGFEMLMLWHERWHRDPAHQWLRQFIVNSLEEQ
CCEEHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
TC
CC
>Mature Secondary Structure
MINLQRLDLNLLRTLDVLLSENNVTRAAQRLNLSQPSVSIQLARLREIFADPLLMPGPRG
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
MQPTARADELRQPLRAALAALEQAVAPVSPFDPATAAETWRVAATDYMASAILLPMLAGL
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RQASPGSRLAVFELQPARLEQQAASDTVDLFFHTREGAPPGLHQRLLFRERYVLAGRAEH
HCCCCCCEEEEEECCHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCC
PALRPGLSLETFCQLEHVIVSPDGGGFSAATDIALANLGLTRRVVLSVPYFLFMLETLRN
CCCCCCCCHHHHHCEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
SDLVAVLPERLVRGQSGLVVVEPPLAVAGFEMLMLWHERWHRDPAHQWLRQFIVNSLEEQ
CCEEHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
TC
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]