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The map label for this gene is lsrB [H]

Identifier: 238892882

GI number: 238892882

Start: 693611

End: 694597

Strand: Direct

Name: lsrB [H]

Synonym: KP1_0702

Alternate gene names: 238892882

Gene position: 693611-694597 (Clockwise)

Preceding gene: 238892877

Following gene: 238892883

Centisome position: 13.22

GC content: 53.19

Gene sequence:

>987_bases
ATTATGCATAAACGTCTGGTCGTTAATATTTTTTCATCATTGCTGTTGGGGGCTGCGCTTATTTCCACGCCGGTATATGC
GGCAGAAAAAACCGTAGTCAATATTTCAAAAGTGGACGGCATGCCATGGTTTAACCGGATGGGTGAAGGGGTAGTCCAGG
CCGGGAAAGAGTTTAACCTCAACGCCTCCCAGGTAGGGCCGTCCAGCACCGATGCGCCGCAGCAGGTGAAAATTATTGAG
GACCTGATTGCACGTAAAGTGGATGCCATCACTATCGTGCCTAACGATGCCAACGTGCTGGAGCCGGTATTCAAAAAAGC
CCGTGACGCCGGCATCGTGGTGCTGACCAACGAATCGCCCGGGCAGCCGAGCGCCAACTGGGATGTGGAGATCATCGATA
ACGAGAAGTTCGCTGCTGAATACGTGGAGCATATGGCCAAGCGGATGGGTGGCAAAGGCGGCTACGTTATCTATGTCGGT
AGCCTTACGGTACCGCAGCACAACCTGTGGGCCGATCTGCTGGTGAAATACCAAAAAGAACATTACCCGGACATGCATGA
AGTCACCCGCCGAATGCCGGTGGCGGAAAGTGTTGATGATTCCCGCCGTACCACGCTCGATCTGATGAAAACTTACCCGG
ATCTGAAAGCGGTGGTCTCTTTTGGTTCGAATGGCCCGATTGGCGCGGGGCGCGCGGTGAAAGAGAAGCGTGCGAAAAAT
AAAGTCGCGGTCTACGGGATGATGATCCCCTCGCAGGCGGCTTCTCTTATTAAGAGCGGCGATATTACCGAAGGGATCAC
CTACGATCCGGCGACAGCCGGCTATGCCCTCGCGGCCGTCGCCAGCACCCTGCTGAACGGCAAAACCATTGAGCCGGGAT
TTGAACTGAAAGAGCTCGGTAAAGCGGAGGTCGATAGCGACAAGCATATTATCCGCTTCCATAAAGTGCTGCTGGTAAAT
AAAGACAATATTGATTCGCTCTACTAA

Upstream 100 bases:

>100_bases
GTGTTTATTCTCTTCTAAATTATTAACATTATTACAATTTCTATCTATTTTTCCGCTTTGCGTCATACCCCTGTCTGACT
ACAACGTATTGAGGCTAATT

Downstream 100 bases:

>100_bases
TCCACCTTCCGGGGCGCCAGCCGCCCCGGCTTAACCAGCCAGGGGATGCTATGGAACCTTTCCTTTCCCTTCGACACGTC
AGCAAAACCTTCCACGCCAA

Product: putative LacI-type transcriptional regulator

Products: NA

Alternate protein names: AI-2-binding protein lsrB [H]

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MMHKRLVVNIFSSLLLGAALISTPVYAAEKTVVNISKVDGMPWFNRMGEGVVQAGKEFNLNASQVGPSSTDAPQQVKIIE
DLIARKVDAITIVPNDANVLEPVFKKARDAGIVVLTNESPGQPSANWDVEIIDNEKFAAEYVEHMAKRMGGKGGYVIYVG
SLTVPQHNLWADLLVKYQKEHYPDMHEVTRRMPVAESVDDSRRTTLDLMKTYPDLKAVVSFGSNGPIGAGRAVKEKRAKN
KVAVYGMMIPSQAASLIKSGDITEGITYDPATAGYALAAVASTLLNGKTIEPGFELKELGKAEVDSDKHIIRFHKVLLVN
KDNIDSLY

Sequences:

>Translated_328_residues
MMHKRLVVNIFSSLLLGAALISTPVYAAEKTVVNISKVDGMPWFNRMGEGVVQAGKEFNLNASQVGPSSTDAPQQVKIIE
DLIARKVDAITIVPNDANVLEPVFKKARDAGIVVLTNESPGQPSANWDVEIIDNEKFAAEYVEHMAKRMGGKGGYVIYVG
SLTVPQHNLWADLLVKYQKEHYPDMHEVTRRMPVAESVDDSRRTTLDLMKTYPDLKAVVSFGSNGPIGAGRAVKEKRAKN
KVAVYGMMIPSQAASLIKSGDITEGITYDPATAGYALAAVASTLLNGKTIEPGFELKELGKAEVDSDKHIIRFHKVLLVN
KDNIDSLY
>Mature_328_residues
MMHKRLVVNIFSSLLLGAALISTPVYAAEKTVVNISKVDGMPWFNRMGEGVVQAGKEFNLNASQVGPSSTDAPQQVKIIE
DLIARKVDAITIVPNDANVLEPVFKKARDAGIVVLTNESPGQPSANWDVEIIDNEKFAAEYVEHMAKRMGGKGGYVIYVG
SLTVPQHNLWADLLVKYQKEHYPDMHEVTRRMPVAESVDDSRRTTLDLMKTYPDLKAVVSFGSNGPIGAGRAVKEKRAKN
KVAVYGMMIPSQAASLIKSGDITEGITYDPATAGYALAAVASTLLNGKTIEPGFELKELGKAEVDSDKHIIRFHKVLLVN
KDNIDSLY

Specific function: Part of the ABC transporter complex lsrABCD involved in autoinducer 2 (AI-2) import. Binds AI-2 and delivers it to the lsrC and lsrD permeases [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787795, Length=339, Percent_Identity=25.3687315634218, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35797; Mature: 35797

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMHKRLVVNIFSSLLLGAALISTPVYAAEKTVVNISKVDGMPWFNRMGEGVVQAGKEFNL
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEHHHHCCCCHHHHHCHHHHHCCCCCCC
NASQVGPSSTDAPQQVKIIEDLIARKVDAITIVPNDANVLEPVFKKARDAGIVVLTNESP
CHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCCC
GQPSANWDVEIIDNEKFAAEYVEHMAKRMGGKGGYVIYVGSLTVPQHNLWADLLVKYQKE
CCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCEECCCHHHHHHHHHHHHHH
HYPDMHEVTRRMPVAESVDDSRRTTLDLMKTYPDLKAVVSFGSNGPIGAGRAVKEKRAKN
HCCCHHHHHHHCCCHHCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHCC
KVAVYGMMIPSQAASLIKSGDITEGITYDPATAGYALAAVASTLLNGKTIEPGFELKELG
CEEEEEEECHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCC
KAEVDSDKHIIRFHKVLLVNKDNIDSLY
CCCCCCCHHHEEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MMHKRLVVNIFSSLLLGAALISTPVYAAEKTVVNISKVDGMPWFNRMGEGVVQAGKEFNL
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEHHHHCCCCHHHHHCHHHHHCCCCCCC
NASQVGPSSTDAPQQVKIIEDLIARKVDAITIVPNDANVLEPVFKKARDAGIVVLTNESP
CHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCCC
GQPSANWDVEIIDNEKFAAEYVEHMAKRMGGKGGYVIYVGSLTVPQHNLWADLLVKYQKE
CCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCEECCCHHHHHHHHHHHHHH
HYPDMHEVTRRMPVAESVDDSRRTTLDLMKTYPDLKAVVSFGSNGPIGAGRAVKEKRAKN
HCCCHHHHHHHCCCHHCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHCC
KVAVYGMMIPSQAASLIKSGDITEGITYDPATAGYALAAVASTLLNGKTIEPGFELKELG
CEEEEEEECHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCC
KAEVDSDKHIIRFHKVLLVNKDNIDSLY
CCCCCCCHHHEEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA