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The map label for this gene is ynaJ [H]

Identifier: 238892851

GI number: 238892851

Start: 655694

End: 657187

Strand: Reverse

Name: ynaJ [H]

Synonym: KP1_0668

Alternate gene names: 238892851

Gene position: 657187-655694 (Counterclockwise)

Preceding gene: 238892854

Following gene: 238892850

Centisome position: 12.52

GC content: 52.61

Gene sequence:

>1494_bases
GTGTTTCACCTACACAAAACAAACCGGAGTCTGCTTAGAATGAGTAAAAACATAATGCACAGTCGGCATGATGAATATCA
TAAATTAACCCGTGGAGAACGAATTGGTTATGGCATGGGCGACTTTGCGCAAAACCTGGTTTTCGGCACAATTGGGGGTT
TTCTGGCTTTGCATATGCTGACGGTAAATACCATCAGCACGGCAACGGCAGGCTTTATTTTTCTTTTTGTTCGCATCATT
AATGTGTTTTGGGATCCGATGGTCGGAACCTACGTGGATAAACGAACCTCGAAAGCAGGGAAATATCGCCCCTGGCTGTT
ACGAGCCGGCGTGCCGCTGGTGATCCTGTCGGCATTACTGTTCGCGCCAATCCCTGGGGTGAAAGGTTCGGTGGCTTTCG
CCTTTATTATTTATCTGGCGCTGGACCTGGTTTATTCCTTAGTCAATATTCCCTATGGCTCGCTGAATGCGTCGCTGACC
CGCGACCCGGAATCGATCGATAAGCTGACCAGTACCCGCATGATGCTGGCCAACAGCGCCAACCTGCTGGTCTATACCCT
GTTCCCGATGTTTGTGCAGATGGCGGCGCCGAAAGATCGCAGCCTGAAAGACACCGGCTTTTTTGGCCTTGAGCTGAATC
TCGGCAACTATACCGATCCGTCAGCGAACTACGCCTGGTTCGGCGTGTACGCCATCTATATGATCATCGGCGCGGTGGCC
CTGTTTATCTGCTACAAATGCACCAAAGAACGCGTTGTCGCGACCGCCGAGCAGACCGCCAACGTCAAAACTACCGACCT
TTTCCACGAGCTCAGACATAACCGTCCGCTGGTTATTCTCGGCATGTTCTTTATGCTGGCCTTTACCTTCATGTTCTTCA
TGAACACCGTTAACGGCTTCTTCAACCAGTTCGTCGTCGGCCATTCCGAATGGATGGGCGCCGTGGGTCTCGTCGCGTCT
ATTCCCGGCATCGCCTTCCCGGTGTTCTGGCCGAAACTGAAAAAAATCTTTGGTAAAAAAGGCTTCTTCCATCTGTTCCT
CGCCATGTTCATCGTCGGCGAACTGCTGACCTACGTCTGGTCCCGCGAAGGGATGCACGACGCCCTGTGGCTGGCCTACA
TCGCCACCTTTATTAAACAGTGGGGCTTAACCTCCGCCACCGGCTTTATGTGGGCGCTGGTACCGGAAGTTATCGCGTAC
GGCGAATTAAAATCGGGCAAACGCAATGCCGCCATTATCAATGCCATTATGGGACTCTTCTTCAAGATCGGCTTCACCAT
CGGCGGCGCGATCCCGCTGTGGCTGCTGGCGGTGTATGAATTTAATGAAAGCGGCGCCGTGCAGAGCGCCAGCGCCATCG
ATGGGATCATTATGACCGCGGTGTGGATCCCAATCGCGCTGGCCGCTATTTCGATGGTGATCATGCAGGTTTATCCGATC
TCCGATAAACATGTTACCGACATCAACCGTCAGCTGGATGAGATCCGCGTGTAG

Upstream 100 bases:

>100_bases
AGGCGATACAGGCCTTTGCTTCGAGGATCACAGAAGTAAAAAAACATAATTACGTAATTTAAAAACGTAATAGATTCTTC
CAGGTCAACTGTGTCAGAAA

Downstream 100 bases:

>100_bases
TTAAAAAAATTATAAATCAGACCGATCCTTAACTTTCCATTTTAAAAGGTGTAATGAAATGTCACTTATTCAAAACCCGA
TATTACGCGGCTTTAATGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MFHLHKTNRSLLRMSKNIMHSRHDEYHKLTRGERIGYGMGDFAQNLVFGTIGGFLALHMLTVNTISTATAGFIFLFVRII
NVFWDPMVGTYVDKRTSKAGKYRPWLLRAGVPLVILSALLFAPIPGVKGSVAFAFIIYLALDLVYSLVNIPYGSLNASLT
RDPESIDKLTSTRMMLANSANLLVYTLFPMFVQMAAPKDRSLKDTGFFGLELNLGNYTDPSANYAWFGVYAIYMIIGAVA
LFICYKCTKERVVATAEQTANVKTTDLFHELRHNRPLVILGMFFMLAFTFMFFMNTVNGFFNQFVVGHSEWMGAVGLVAS
IPGIAFPVFWPKLKKIFGKKGFFHLFLAMFIVGELLTYVWSREGMHDALWLAYIATFIKQWGLTSATGFMWALVPEVIAY
GELKSGKRNAAIINAIMGLFFKIGFTIGGAIPLWLLAVYEFNESGAVQSASAIDGIIMTAVWIPIALAAISMVIMQVYPI
SDKHVTDINRQLDEIRV

Sequences:

>Translated_497_residues
MFHLHKTNRSLLRMSKNIMHSRHDEYHKLTRGERIGYGMGDFAQNLVFGTIGGFLALHMLTVNTISTATAGFIFLFVRII
NVFWDPMVGTYVDKRTSKAGKYRPWLLRAGVPLVILSALLFAPIPGVKGSVAFAFIIYLALDLVYSLVNIPYGSLNASLT
RDPESIDKLTSTRMMLANSANLLVYTLFPMFVQMAAPKDRSLKDTGFFGLELNLGNYTDPSANYAWFGVYAIYMIIGAVA
LFICYKCTKERVVATAEQTANVKTTDLFHELRHNRPLVILGMFFMLAFTFMFFMNTVNGFFNQFVVGHSEWMGAVGLVAS
IPGIAFPVFWPKLKKIFGKKGFFHLFLAMFIVGELLTYVWSREGMHDALWLAYIATFIKQWGLTSATGFMWALVPEVIAY
GELKSGKRNAAIINAIMGLFFKIGFTIGGAIPLWLLAVYEFNESGAVQSASAIDGIIMTAVWIPIALAAISMVIMQVYPI
SDKHVTDINRQLDEIRV
>Mature_497_residues
MFHLHKTNRSLLRMSKNIMHSRHDEYHKLTRGERIGYGMGDFAQNLVFGTIGGFLALHMLTVNTISTATAGFIFLFVRII
NVFWDPMVGTYVDKRTSKAGKYRPWLLRAGVPLVILSALLFAPIPGVKGSVAFAFIIYLALDLVYSLVNIPYGSLNASLT
RDPESIDKLTSTRMMLANSANLLVYTLFPMFVQMAAPKDRSLKDTGFFGLELNLGNYTDPSANYAWFGVYAIYMIIGAVA
LFICYKCTKERVVATAEQTANVKTTDLFHELRHNRPLVILGMFFMLAFTFMFFMNTVNGFFNQFVVGHSEWMGAVGLVAS
IPGIAFPVFWPKLKKIFGKKGFFHLFLAMFIVGELLTYVWSREGMHDALWLAYIATFIKQWGLTSATGFMWALVPEVIAY
GELKSGKRNAAIINAIMGLFFKIGFTIGGAIPLWLLAVYEFNESGAVQSASAIDGIIMTAVWIPIALAAISMVIMQVYPI
SDKHVTDINRQLDEIRV

Specific function: Unknown

COG id: COG2211

COG function: function code G; Na+/melibiose symporter and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]

Homologues:

Organism=Escherichia coli, GI1786466, Length=474, Percent_Identity=27.8481012658228, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1787902, Length=475, Percent_Identity=28.8421052631579, Blast_Score=155, Evalue=7e-39,
Organism=Escherichia coli, GI48994989, Length=478, Percent_Identity=25.3138075313808, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI145693206, Length=474, Percent_Identity=24.6835443037975, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI87082306, Length=493, Percent_Identity=24.3407707910751, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI1790561, Length=168, Percent_Identity=25.5952380952381, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001927
- InterPro:   IPR018043 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 55603; Mature: 55603

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHHHHHHHHHHHCC
>Mature Secondary Structure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CCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]