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The map label for this gene is traC [H]

Identifier: 238892784

GI number: 238892784

Start: 581386

End: 582387

Strand: Reverse

Name: traC [H]

Synonym: KP1_0590

Alternate gene names: 238892784

Gene position: 582387-581386 (Counterclockwise)

Preceding gene: 238892785

Following gene: 238892783

Centisome position: 11.1

GC content: 61.18

Gene sequence:

>1002_bases
ATGTGCAGGTCTCGATGGCTGAACAGGCATAACCTCTCCCCGCCGGAGTCGCTTCCGGATGGAGGCAGCTCCGGCTTCTT
CCATGAGGATCGCACAATGGACAGAAGCAACGATATCTACCAGAAAGTCACCGACCAGATTATTGCTGAGCTGGAAAACG
GCAATGTGCCGTGGATCCGCCCGTGGCGCGATGGCGAGCCGCCGTTCCCGATCAATGCGTTATCCGGTCGTCCGTATCAC
GGCATCAACGTGCCGCTGTTGTGGAACAGCGCCGACAAGCAGAGTTTCGCCAGTGACCGCTGGCTGACGTTCCATCAGGT
TAGCGCGCTTGGCGCACAGGTACGCAGAGGGGAAAAATCGTCCCTGGCCGTGCTGTACCTGCCGCGCACGCAGGAGGAAA
CCGACGCTCTCGGTCAGCCGTTGCTCGATGAAAACGGTGAGCCGCAGGTGCGGCATTTCGGGATCATTCGTGAGTTCCGG
CTGTTTAACCTGTCGCAGTGCGACGGCCTGCCGCAGACGCTGTCTGAGCCGTTTACCCGGCCCGCAGAACCGGTGGAAAC
CGCCGAAGCCATTGCGATGAATAGCGGCGTAACACTGCACCATCGCCGCCAGTCGAAAGCGTATTACAAACCCGCGACCG
ACCTGGTGATGATGCCGCACCCGCAGCAGTTTGAAAGCAGTGAGGCGTACTACGCCACGCTGCTGCATGAACTGACGCAC
GCCACCGGTCACGCTTCACGCCTGAACCGCCCCGGTATTGCCGGAACGGAACGCACCGAAGCGCTCTACGCCGCTGAAGA
GTTAGTGGCGGAGATGGGCAGCGCCTTCCTGTGCGCCCACTGCGGCATTCTGGGCAGGCTCCAGCACGCCAGCTATATCG
GCTACTGGCTGGATATCCTGCGCCAGGACAAACGGGCAGTGATCCGCGCCAGCGGTATGGCGCGCCACGCCAGTGAATGG
CTGCTCAACGCTGTACCACAACCCTGTCAGCTTAGCGCCTGA

Upstream 100 bases:

>100_bases
TCCCGCAAGAAAGTCACCTTTACGATCTACTGCCAGCCGCCGCAAGGCGATATGAAAGTCCCTGTCGCATTACCGCTATC
ACTCAACTATCACGGCCACT

Downstream 100 bases:

>100_bases
CAGCCCACCCGCACGGGGAGCCTTCCCCGTCGGGGAGTTGCTCCCCTTTTTCTGAGGATCAATGTATGGGACTCGATCTC
TTCTTTTTCGAACGGGCAAA

Product: putative antirestriction protein

Products: NA

Alternate protein names: Replication primase [H]

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MCRSRWLNRHNLSPPESLPDGGSSGFFHEDRTMDRSNDIYQKVTDQIIAELENGNVPWIRPWRDGEPPFPINALSGRPYH
GINVPLLWNSADKQSFASDRWLTFHQVSALGAQVRRGEKSSLAVLYLPRTQEETDALGQPLLDENGEPQVRHFGIIREFR
LFNLSQCDGLPQTLSEPFTRPAEPVETAEAIAMNSGVTLHHRRQSKAYYKPATDLVMMPHPQQFESSEAYYATLLHELTH
ATGHASRLNRPGIAGTERTEALYAAEELVAEMGSAFLCAHCGILGRLQHASYIGYWLDILRQDKRAVIRASGMARHASEW
LLNAVPQPCQLSA

Sequences:

>Translated_333_residues
MCRSRWLNRHNLSPPESLPDGGSSGFFHEDRTMDRSNDIYQKVTDQIIAELENGNVPWIRPWRDGEPPFPINALSGRPYH
GINVPLLWNSADKQSFASDRWLTFHQVSALGAQVRRGEKSSLAVLYLPRTQEETDALGQPLLDENGEPQVRHFGIIREFR
LFNLSQCDGLPQTLSEPFTRPAEPVETAEAIAMNSGVTLHHRRQSKAYYKPATDLVMMPHPQQFESSEAYYATLLHELTH
ATGHASRLNRPGIAGTERTEALYAAEELVAEMGSAFLCAHCGILGRLQHASYIGYWLDILRQDKRAVIRASGMARHASEW
LLNAVPQPCQLSA
>Mature_333_residues
MCRSRWLNRHNLSPPESLPDGGSSGFFHEDRTMDRSNDIYQKVTDQIIAELENGNVPWIRPWRDGEPPFPINALSGRPYH
GINVPLLWNSADKQSFASDRWLTFHQVSALGAQVRRGEKSSLAVLYLPRTQEETDALGQPLLDENGEPQVRHFGIIREFR
LFNLSQCDGLPQTLSEPFTRPAEPVETAEAIAMNSGVTLHHRRQSKAYYKPATDLVMMPHPQQFESSEAYYATLLHELTH
ATGHASRLNRPGIAGTERTEALYAAEELVAEMGSAFLCAHCGILGRLQHASYIGYWLDILRQDKRAVIRASGMARHASEW
LLNAVPQPCQLSA

Specific function: Required for autonomous replication in E.coli. Transferred into the recipient cell during bacterial conjugation. Catalyzes the synthesis of short oligoribonucleotide primers with CpA or pCpA at their 5'-termini on a single stranded template DNA [H]

COG id: COG4227

COG function: function code L; Antirestriction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013610
- InterPro:   IPR006171 [H]

Pfam domain/function: PF08401 DUF1738; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 37419; Mature: 37419

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCRSRWLNRHNLSPPESLPDGGSSGFFHEDRTMDRSNDIYQKVTDQIIAELENGNVPWIR
CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEC
PWRDGEPPFPINALSGRPYHGINVPLLWNSADKQSFASDRWLTFHQVSALGAQVRRGEKS
CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCC
SLAVLYLPRTQEETDALGQPLLDENGEPQVRHFGIIREFRLFNLSQCDGLPQTLSEPFTR
CEEEEEECCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCHHHHHHHCCC
PAEPVETAEAIAMNSGVTLHHRRQSKAYYKPATDLVMMPHPQQFESSEAYYATLLHELTH
CCCHHHHHHHHHHCCCCEEEEHHCCCCEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHH
ATGHASRLNRPGIAGTERTEALYAAEELVAEMGSAFLCAHCGILGRLQHASYIGYWLDIL
HCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RQDKRAVIRASGMARHASEWLLNAVPQPCQLSA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MCRSRWLNRHNLSPPESLPDGGSSGFFHEDRTMDRSNDIYQKVTDQIIAELENGNVPWIR
CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEC
PWRDGEPPFPINALSGRPYHGINVPLLWNSADKQSFASDRWLTFHQVSALGAQVRRGEKS
CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCC
SLAVLYLPRTQEETDALGQPLLDENGEPQVRHFGIIREFRLFNLSQCDGLPQTLSEPFTR
CEEEEEECCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCHHHHHHHCCC
PAEPVETAEAIAMNSGVTLHHRRQSKAYYKPATDLVMMPHPQQFESSEAYYATLLHELTH
CCCHHHHHHHHHHCCCCEEEEHHCCCCEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHH
ATGHASRLNRPGIAGTERTEALYAAEELVAEMGSAFLCAHCGILGRLQHASYIGYWLDIL
HCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RQDKRAVIRASGMARHASEWLLNAVPQPCQLSA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1818755 [H]