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The map label for this gene is yjfF [H]

Identifier: 238892707

GI number: 238892707

Start: 494642

End: 495640

Strand: Direct

Name: yjfF [H]

Synonym: KP1_0498

Alternate gene names: 238892707

Gene position: 494642-495640 (Clockwise)

Preceding gene: 238892706

Following gene: 238892710

Centisome position: 9.42

GC content: 59.86

Gene sequence:

>999_bases
GTGATAAAACGTAATTTACCATTGATGATCACCCTTGCGGTGTTTGTGCTGGGCTACCTCTACTGCCTGACTCAGTTCCC
CGGTTTTGCCTCAACGCGGGTGATCTGCAATATCCTGACGGATAATGCCTTCCTCGGGATCATCGCCGTGGGCATGACCT
TCGTGATCCTCTCCGGCGGGATCGATCTGTCGGTGGGGTCGGTGATCGCCTTTACCGGCGTCTTCCTCGCCAAAGCGATT
GGCTTTTGGGGAATCTCGCCGCTGGTGGCCTTTCCGCTGGTGCTGGTGATGGGCTGCGCCTTCGGCGCGTTTATGGGGCT
GCTGATTGACGCCCTGAAGATCCCGGCCTTTATCATCACCCTCGCCGGCATGTTCTTCCTGCGCGGCGTGAGCTATCTGG
TGTCAGAGGAGTCGATTCCGATTAACCACCCAGTGTACGACACCCTGTCCGGGCTGGCATGGACCATTCCCGGCGGCGGT
CGTCTCAGCGCCATGGGACTGCTGATGCTGCTGGTGGTGGTGGCCGGTATTTTTGTCGCCCATCGCACCCGCTTTGGCAA
CCTGGTGTATGCCATCGGCGGCAACGCCACGTCGGCGAATCTGATGGGGATTTCGACTCGCAGCGCCACGATCCGTATCT
ATATGCTCTCCACCGGACTGGCGACGCTGGCTGGGATCGTCTTTTCCATTTATACCCAGGCGGGCTATGCGCTGGCGGGC
GTCGGCGTCGAGCTGGATGCGATTGCCTCGGTGGTGATCGGCGGTACGCTGCTAAGCGGTGGCGTCGGTACCGTGCTGGG
AACGCTGTTCGGGGTGGCGATCCAGGGGCTGATTCAGACCTACATCAACTTCGACGGCACCCTCAGCTCATGGTGGACGA
AAATCGCCATCGGCATTTTGCTGTTTATCTTTATCGCGCTGCAGCGTGGTCTGACCGTGCTGTGGGAAAATCGGCAAAAT
GCGGCGGTGACGCGGGTGAGCGGGGCGGGGAGTCGCTAA

Upstream 100 bases:

>100_bases
CCGCCGGAGCTCAACCAGGTGGTGAAAGCGGTGGTGGTGCTGTGCGTACTGATTGTCCAGTCGCCGCGCTTTATCGGTTT
ACTGAAAGGGGTACGCGGCC

Downstream 100 bases:

>100_bases
GAAATGCTCCTCCCGCAGGCGCGGGAGGAGCGGGCAGGGCGCTTAGGCGTCCGGGAACGCTTTAATAAAGTTCTCGACGT
CTTCTACCATGTGGTTGTTG

Product: inner membrane ABC transporter permease protein YjfF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MIKRNLPLMITLAVFVLGYLYCLTQFPGFASTRVICNILTDNAFLGIIAVGMTFVILSGGIDLSVGSVIAFTGVFLAKAI
GFWGISPLVAFPLVLVMGCAFGAFMGLLIDALKIPAFIITLAGMFFLRGVSYLVSEESIPINHPVYDTLSGLAWTIPGGG
RLSAMGLLMLLVVVAGIFVAHRTRFGNLVYAIGGNATSANLMGISTRSATIRIYMLSTGLATLAGIVFSIYTQAGYALAG
VGVELDAIASVVIGGTLLSGGVGTVLGTLFGVAIQGLIQTYINFDGTLSSWWTKIAIGILLFIFIALQRGLTVLWENRQN
AAVTRVSGAGSR

Sequences:

>Translated_332_residues
MIKRNLPLMITLAVFVLGYLYCLTQFPGFASTRVICNILTDNAFLGIIAVGMTFVILSGGIDLSVGSVIAFTGVFLAKAI
GFWGISPLVAFPLVLVMGCAFGAFMGLLIDALKIPAFIITLAGMFFLRGVSYLVSEESIPINHPVYDTLSGLAWTIPGGG
RLSAMGLLMLLVVVAGIFVAHRTRFGNLVYAIGGNATSANLMGISTRSATIRIYMLSTGLATLAGIVFSIYTQAGYALAG
VGVELDAIASVVIGGTLLSGGVGTVLGTLFGVAIQGLIQTYINFDGTLSSWWTKIAIGILLFIFIALQRGLTVLWENRQN
AAVTRVSGAGSR
>Mature_332_residues
MIKRNLPLMITLAVFVLGYLYCLTQFPGFASTRVICNILTDNAFLGIIAVGMTFVILSGGIDLSVGSVIAFTGVFLAKAI
GFWGISPLVAFPLVLVMGCAFGAFMGLLIDALKIPAFIITLAGMFFLRGVSYLVSEESIPINHPVYDTLSGLAWTIPGGG
RLSAMGLLMLLVVVAGIFVAHRTRFGNLVYAIGGNATSANLMGISTRSATIRIYMLSTGLATLAGIVFSIYTQAGYALAG
VGVELDAIASVVIGGTLLSGGVGTVLGTLFGVAIQGLIQTYINFDGTLSSWWTKIAIGILLFIFIALQRGLTVLWENRQN
AAVTRVSGAGSR

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI87082395, Length=327, Percent_Identity=94.1896024464832, Blast_Score=599, Evalue=1e-173,
Organism=Escherichia coli, GI1790191, Length=299, Percent_Identity=37.123745819398, Blast_Score=132, Evalue=4e-32,
Organism=Escherichia coli, GI1788896, Length=304, Percent_Identity=36.5131578947368, Blast_Score=131, Evalue=6e-32,
Organism=Escherichia coli, GI1789992, Length=354, Percent_Identity=29.9435028248588, Blast_Score=104, Evalue=9e-24,
Organism=Escherichia coli, GI145693152, Length=273, Percent_Identity=31.1355311355311, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1790524, Length=282, Percent_Identity=31.5602836879433, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI145693214, Length=252, Percent_Identity=34.1269841269841, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787793, Length=315, Percent_Identity=30.4761904761905, Blast_Score=71, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 34837; Mature: 34837

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRNLPLMITLAVFVLGYLYCLTQFPGFASTRVICNILTDNAFLGIIAVGMTFVILSGG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
IDLSVGSVIAFTGVFLAKAIGFWGISPLVAFPLVLVMGCAFGAFMGLLIDALKIPAFIIT
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGMFFLRGVSYLVSEESIPINHPVYDTLSGLAWTIPGGGRLSAMGLLMLLVVVAGIFVA
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH
HRTRFGNLVYAIGGNATSANLMGISTRSATIRIYMLSTGLATLAGIVFSIYTQAGYALAG
HHHHHCCEEEEECCCCCCCEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHCCCEEEE
VGVELDAIASVVIGGTLLSGGVGTVLGTLFGVAIQGLIQTYINFDGTLSSWWTKIAIGIL
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LFIFIALQRGLTVLWENRQNAAVTRVSGAGSR
HHHHHHHHCCCEEEEECCCCCEEEEECCCCCC
>Mature Secondary Structure
MIKRNLPLMITLAVFVLGYLYCLTQFPGFASTRVICNILTDNAFLGIIAVGMTFVILSGG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
IDLSVGSVIAFTGVFLAKAIGFWGISPLVAFPLVLVMGCAFGAFMGLLIDALKIPAFIIT
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGMFFLRGVSYLVSEESIPINHPVYDTLSGLAWTIPGGGRLSAMGLLMLLVVVAGIFVA
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH
HRTRFGNLVYAIGGNATSANLMGISTRSATIRIYMLSTGLATLAGIVFSIYTQAGYALAG
HHHHHCCEEEEECCCCCCCEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHCCCEEEE
VGVELDAIASVVIGGTLLSGGVGTVLGTLFGVAIQGLIQTYINFDGTLSSWWTKIAIGIL
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LFIFIALQRGLTVLWENRQNAAVTRVSGAGSR
HHHHHHHHCCCEEEEECCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 2843822; 7984428 [H]