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The map label for this gene is ytfQ [H]

Identifier: 238892704

GI number: 238892704

Start: 491037

End: 491993

Strand: Direct

Name: ytfQ [H]

Synonym: KP1_0495

Alternate gene names: 238892704

Gene position: 491037-491993 (Clockwise)

Preceding gene: 238892701

Following gene: 238892705

Centisome position: 9.36

GC content: 54.44

Gene sequence:

>957_bases
ATGTGGAAGCGCTTACTTCTTGTCACAGCAGTTTCCGCAGCTATGTCGTCTATGGCGATAGCTGCCCCGCTAACCGTAGG
TTTTTCGCAGGTCGGTTCTGAATCCGGCTGGCGTGCGGCGGAAACCAGCGTCGCGAAAGAGGAGGCCGCCAAGCGCGGTA
TCACCCTGAAGATCGCTGATGGTCAGCAAAAACAGGAAAACCAGATCAAAGCAGTACGTTCCTTTATTGCTCAAGGGGTC
GACGCGATCTTCATTGCGCCGGTGGTGGCTACCGGCTGGGAACCGGTGCTGAAAGAGGCGAAAGAGGCCAAGATCCCGGT
TTTCCTCCTCGACCGTTCCATTGATGTTAAAGATAAAGATCTCTACATGACCACCGTGACCGCCAACAACGTGCTGGAAG
GCCAGCTGATTGGCGACTGGCTGGTGAAAACCGTCGACGGTAAGCCGTGCAACGTCGTTGAACTGCAGGGCACCGTTGGG
GCCAGCGTGGCCATCGATCGTAAGAAAGGGTTCGCCGACGCGATTGCCAAAGCGTCGAATATCAAAATTATCCGCTCCCA
GTCCGGCGACTTCACCCGCAGTAAAGGGAAAGAGGTCATGGAGAGCTTTATCAAAGCTGAGAATAACGGCAAAAACATCT
GCATGGTGTTCGCTCATAACGACGATATGGCCATCGGCGCCATCCAGGCCATTAAAGAAGCTGGCCTGAAGCCGGGCAAA
GATATTCTGACCGGCTCCATCGACGGCGTGCCGGATATCTATAAAGCGATGATCGCCGGAGAAGCCAACGCCAGCGTCGA
GCTGACGCCAAATATGGCCGGCCCGGCGTTCGATGCGCTGGAGAAATATAAAAAAGACGGCACCCTGCCGGAGAAGCTGA
CCATCACCAAATCGACGCTGTATCTGCCGGATACGGCGAAAGAAGAGTTAGAGAAGAAGAAAAATATGGGCTACTGA

Upstream 100 bases:

>100_bases
TTTTGAAGTGTGATGTAACGCATTCAGTTACATCACCGATTGTCTATAGTTTGTCCGCAGGTGAGACTTTAACCAACAAT
AACCCTACGAGGATACCCTT

Downstream 100 bases:

>100_bases
GTGGGGAGCCCCTCATTCCATCCCTCTCCCCGATGGGAGAGGGTAAAAAGCAGCGTTCCAGAAACCCCGGGAAGCCCAGC
GCGACCCGGGGTAACCTGAC

Product: putative D-ribose transport system periplasmic binding component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MWKRLLLVTAVSAAMSSMAIAAPLTVGFSQVGSESGWRAAETSVAKEEAAKRGITLKIADGQQKQENQIKAVRSFIAQGV
DAIFIAPVVATGWEPVLKEAKEAKIPVFLLDRSIDVKDKDLYMTTVTANNVLEGQLIGDWLVKTVDGKPCNVVELQGTVG
ASVAIDRKKGFADAIAKASNIKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVFAHNDDMAIGAIQAIKEAGLKPGK
DILTGSIDGVPDIYKAMIAGEANASVELTPNMAGPAFDALEKYKKDGTLPEKLTITKSTLYLPDTAKEELEKKKNMGY

Sequences:

>Translated_318_residues
MWKRLLLVTAVSAAMSSMAIAAPLTVGFSQVGSESGWRAAETSVAKEEAAKRGITLKIADGQQKQENQIKAVRSFIAQGV
DAIFIAPVVATGWEPVLKEAKEAKIPVFLLDRSIDVKDKDLYMTTVTANNVLEGQLIGDWLVKTVDGKPCNVVELQGTVG
ASVAIDRKKGFADAIAKASNIKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVFAHNDDMAIGAIQAIKEAGLKPGK
DILTGSIDGVPDIYKAMIAGEANASVELTPNMAGPAFDALEKYKKDGTLPEKLTITKSTLYLPDTAKEELEKKKNMGY
>Mature_318_residues
MWKRLLLVTAVSAAMSSMAIAAPLTVGFSQVGSESGWRAAETSVAKEEAAKRGITLKIADGQQKQENQIKAVRSFIAQGV
DAIFIAPVVATGWEPVLKEAKEAKIPVFLLDRSIDVKDKDLYMTTVTANNVLEGQLIGDWLVKTVDGKPCNVVELQGTVG
ASVAIDRKKGFADAIAKASNIKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVFAHNDDMAIGAIQAIKEAGLKPGK
DILTGSIDGVPDIYKAMIAGEANASVELTPNMAGPAFDALEKYKKDGTLPEKLTITKSTLYLPDTAKEELEKKKNMGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790674, Length=318, Percent_Identity=92.1383647798742, Blast_Score=582, Evalue=1e-167,
Organism=Escherichia coli, GI1790192, Length=276, Percent_Identity=32.2463768115942, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1790526, Length=233, Percent_Identity=27.0386266094421, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 34138; Mature: 34138

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKRLLLVTAVSAAMSSMAIAAPLTVGFSQVGSESGWRAAETSVAKEEAAKRGITLKIAD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEECC
GQQKQENQIKAVRSFIAQGVDAIFIAPVVATGWEPVLKEAKEAKIPVFLLDRSIDVKDKD
CCCHHHHHHHHHHHHHHCCCCEEEEHHHHHCCCHHHHHHHHHCCCCEEEECCCCCCCCCC
LYMTTVTANNVLEGQLIGDWLVKTVDGKPCNVVELQGTVGASVAIDRKKGFADAIAKASN
EEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEECCCCHHHHHHCCCC
IKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVFAHNDDMAIGAIQAIKEAGLKPGK
EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCC
DILTGSIDGVPDIYKAMIAGEANASVELTPNMAGPAFDALEKYKKDGTLPEKLTITKSTL
HHCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEE
YLPDTAKEELEKKKNMGY
ECCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MWKRLLLVTAVSAAMSSMAIAAPLTVGFSQVGSESGWRAAETSVAKEEAAKRGITLKIAD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEECC
GQQKQENQIKAVRSFIAQGVDAIFIAPVVATGWEPVLKEAKEAKIPVFLLDRSIDVKDKD
CCCHHHHHHHHHHHHHHCCCCEEEEHHHHHCCCHHHHHHHHHCCCCEEEECCCCCCCCCC
LYMTTVTANNVLEGQLIGDWLVKTVDGKPCNVVELQGTVGASVAIDRKKGFADAIAKASN
EEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEECCCCHHHHHHCCCC
IKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVFAHNDDMAIGAIQAIKEAGLKPGK
EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCC
DILTGSIDGVPDIYKAMIAGEANASVELTPNMAGPAFDALEKYKKDGTLPEKLTITKSTL
HHCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEE
YLPDTAKEELEKKKNMGY
ECCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 9298646 [H]