Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238028362
Identifier: 238028362
GI number: 238028362
Start: 3204222
End: 3204536
Strand: Direct
Name: 238028362
Synonym: bglu_1g28230
Alternate gene names: NA
Gene position: 3204222-3204536 (Clockwise)
Preceding gene: 238028361
Following gene: 238028363
Centisome position: 82.02
GC content: 64.44
Gene sequence:
>315_bases ATGACCACCAAGCAGATCGAAGTCTCGATTCTCGGCCAGGCGTATCGCCTCGCGTGCTCGCCGGAAACCGAAGCGGCGCT GCTCGAAGCGGTGGCACGCGTGGACGCCGAGATGTCGAAGATCCGTACCAATAGTTCGGTGCGCGGCACCGACCGGATCG CGGTGATGGCCGCGCTGTCGCTGGCCTCGGAGTTGCTTCGCCTGCAACAGAGCGTTCGCCACGGCGAAGCATTTCCCGCC GAGGAAATCCGGCGTACAATGCGCCACATGAACGAACAGCTCGGCGCGGTCCTGGCCCAGCACGAAGCGCGGTAA
Upstream 100 bases:
>100_bases CGCGTACGAAGCAGGCGGCCGACGGCGAGAGCCAGCTCGACCTGCTCGACGCCCCGGCCGAAGCGGCGGGCAGCGGTGCG TCCAGCCACGGAGAACATGC
Downstream 100 bases:
>100_bases GCGACGCGCTCACGGCGGCGGTTCGGTCGGAAAGATTTGGTTGGAACGATTTGCTCAGCTTCCCTGCCTGGTTCGCCAAG GTCATATATTCCTTGAACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MTTKQIEVSILGQAYRLACSPETEAALLEAVARVDAEMSKIRTNSSVRGTDRIAVMAALSLASELLRLQQSVRHGEAFPA EEIRRTMRHMNEQLGAVLAQHEAR
Sequences:
>Translated_104_residues MTTKQIEVSILGQAYRLACSPETEAALLEAVARVDAEMSKIRTNSSVRGTDRIAVMAALSLASELLRLQQSVRHGEAFPA EEIRRTMRHMNEQLGAVLAQHEAR >Mature_103_residues TTKQIEVSILGQAYRLACSPETEAALLEAVARVDAEMSKIRTNSSVRGTDRIAVMAALSLASELLRLQQSVRHGEAFPAE EIRRTMRHMNEQLGAVLAQHEAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11488; Mature: 11357
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKQIEVSILGQAYRLACSPETEAALLEAVARVDAEMSKIRTNSSVRGTDRIAVMAALS CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH LASELLRLQQSVRHGEAFPAEEIRRTMRHMNEQLGAVLAQHEAR HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTKQIEVSILGQAYRLACSPETEAALLEAVARVDAEMSKIRTNSSVRGTDRIAVMAALS CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH LASELLRLQQSVRHGEAFPAEEIRRTMRHMNEQLGAVLAQHEAR HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA