Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is panC [H]
Identifier: 238028347
GI number: 238028347
Start: 3188481
End: 3189320
Strand: Direct
Name: panC [H]
Synonym: bglu_1g28080
Alternate gene names: 238028347
Gene position: 3188481-3189320 (Clockwise)
Preceding gene: 238028346
Following gene: 238028348
Centisome position: 81.62
GC content: 69.29
Gene sequence:
>840_bases ATGAAAGTCATCAGCACGATCCAGGAACTGCGCGACCAGTTGCGCGGCCAGAACCGCACGGCCTTCGTGCCGACCATGGG CAACCTGCATGACGGCCATCTGTCGCTGATGCGGCTCGCGCGCCAGCACGGCGACCCGGTGGTCGCGAGCATTTTCGTGA ACCGGCTGCAGTTCGGCCCGAACGAGGACTTCGACAAGTATCCGCGCACGCTCGAGCAGGACATCGAGAAGCTGCAGAAG GAAAACGTCTACGTGCTGTTCGCGCCCACCGAGCGCGACCTCTATCCGGAGCCGCAGGAATATCGCGTGCAGCCGCCGCA CGACCTCGGCGACATCCTGGAGGGCGAGTTCCGCCCCGGCTTCTTCACCGGGGTGTGCACCGTGGTCACCAAGCTGATGG CCTGCGTGTCGCCCAAGGTGGCCGTGTTCGGCAAGAAGGATTACCAGCAGCTGATGATCGTGCGCCGCATGTGCCATCAG CTCGCGCTGCCGGTGGAGATCGTCGCCGCCGAGACGGTGCGCGACGACGACGGCCTCGCGATGTCCTCGCGCAACCGCTT CCTGAGCCCGGCCGAGCGCGCCGAGGCGCCGCAGCTCGCGCGTGCGCTGCAGCGCGTGCGCGAGAGCGTGCTTGGCGGCG AGCGCGACCTCGCGGCCGTCGAGGCGCGCGCGCGCGAGGCGCTGGCCGCGCGCGGCTGGCAGCCCGACTATGTCGCGGTG CGCCGCCGCGCCAATCTGGTGGCGCCGAGCGCCGCCCAGCTCGAAGCCGGCGAGCCGCTGGTGGTGCTGGCGGCCGCCAA GCTCGGCACCACGCGCCTCATCGACAATCTCGAGATCTGA
Upstream 100 bases:
>100_bases GCCGCCGTGCGCCGCACCGGGCGAGCGACACCTCCGATCACGACGCCGCGCCAGACGCGGCGGCAACGCGCGAGACGCGC GAGGAACCGCCTGACCGATC
Downstream 100 bases:
>100_bases CGGCCCGCCGGCCGCGATCCCGCCAACCCACGCCAGGAAACGCCATGCAGCGCCACATGCTGAAATCGAAGATCCACCGT GCCACGGTCACGCACTGCGA
Product: pantoate--beta-alanine ligase
Products: NA
Alternate protein names: PS; Pantoate--beta-alanine ligase; Pantoate-activating enzyme [H]
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MKVISTIQELRDQLRGQNRTAFVPTMGNLHDGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLEQDIEKLQK ENVYVLFAPTERDLYPEPQEYRVQPPHDLGDILEGEFRPGFFTGVCTVVTKLMACVSPKVAVFGKKDYQQLMIVRRMCHQ LALPVEIVAAETVRDDDGLAMSSRNRFLSPAERAEAPQLARALQRVRESVLGGERDLAAVEARAREALAARGWQPDYVAV RRRANLVAPSAAQLEAGEPLVVLAAAKLGTTRLIDNLEI
Sequences:
>Translated_279_residues MKVISTIQELRDQLRGQNRTAFVPTMGNLHDGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLEQDIEKLQK ENVYVLFAPTERDLYPEPQEYRVQPPHDLGDILEGEFRPGFFTGVCTVVTKLMACVSPKVAVFGKKDYQQLMIVRRMCHQ LALPVEIVAAETVRDDDGLAMSSRNRFLSPAERAEAPQLARALQRVRESVLGGERDLAAVEARAREALAARGWQPDYVAV RRRANLVAPSAAQLEAGEPLVVLAAAKLGTTRLIDNLEI >Mature_279_residues MKVISTIQELRDQLRGQNRTAFVPTMGNLHDGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLEQDIEKLQK ENVYVLFAPTERDLYPEPQEYRVQPPHDLGDILEGEFRPGFFTGVCTVVTKLMACVSPKVAVFGKKDYQQLMIVRRMCHQ LALPVEIVAAETVRDDDGLAMSSRNRFLSPAERAEAPQLARALQRVRESVLGGERDLAAVEARAREALAARGWQPDYVAV RRRANLVAPSAAQLEAGEPLVVLAAAKLGTTRLIDNLEI
Specific function: Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate [H]
COG id: COG0414
COG function: function code H; Panthothenate synthetase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pantothenate synthetase family [H]
Homologues:
Organism=Escherichia coli, GI1786325, Length=282, Percent_Identity=42.9078014184397, Blast_Score=215, Evalue=2e-57, Organism=Saccharomyces cerevisiae, GI6322046, Length=310, Percent_Identity=35.1612903225806, Blast_Score=156, Evalue=3e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR003721 - InterPro: IPR014729 [H]
Pfam domain/function: PF02569 Pantoate_ligase [H]
EC number: =6.3.2.1 [H]
Molecular weight: Translated: 31222; Mature: 31222
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVISTIQELRDQLRGQNRTAFVPTMGNLHDGHLSLMRLARQHGDPVVASIFVNRLQFGP CCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC NEDFDKYPRTLEQDIEKLQKENVYVLFAPTERDLYPEPQEYRVQPPHDLGDILEGEFRPG CCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHCCCCCCCCHHHHHCCCCCCC FFTGVCTVVTKLMACVSPKVAVFGKKDYQQLMIVRRMCHQLALPVEIVAAETVRDDDGLA HHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCE MSSRNRFLSPAERAEAPQLARALQRVRESVLGGERDLAAVEARAREALAARGWQPDYVAV ECCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH RRRANLVAPSAAQLEAGEPLVVLAAAKLGTTRLIDNLEI HHHHCCCCCCHHHHCCCCCEEEEEEHHHCHHHHHHCCCC >Mature Secondary Structure MKVISTIQELRDQLRGQNRTAFVPTMGNLHDGHLSLMRLARQHGDPVVASIFVNRLQFGP CCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC NEDFDKYPRTLEQDIEKLQKENVYVLFAPTERDLYPEPQEYRVQPPHDLGDILEGEFRPG CCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHCCCCCCCCHHHHHCCCCCCC FFTGVCTVVTKLMACVSPKVAVFGKKDYQQLMIVRRMCHQLALPVEIVAAETVRDDDGLA HHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCE MSSRNRFLSPAERAEAPQLARALQRVRESVLGGERDLAAVEARAREALAARGWQPDYVAV ECCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH RRRANLVAPSAAQLEAGEPLVVLAAAKLGTTRLIDNLEI HHHHCCCCCCHHHHCCCCCEEEEEEHHHCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA