| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028265
Identifier: 238028265
GI number: 238028265
Start: 3094610
End: 3095506
Strand: Reverse
Name: 238028265
Synonym: bglu_1g27190
Alternate gene names: NA
Gene position: 3095506-3094610 (Counterclockwise)
Preceding gene: 238028266
Following gene: 238028264
Centisome position: 79.24
GC content: 63.88
Gene sequence:
>897_bases ATGACCATGATCGATCTCTCGGCGATGGATCCGCCGGATCTCGTTGAAACGCTCGATTTCGAGGCTGCCTATCAGCTGAA GCTGGCTCATTTCAAAGGCATCTACCCGGATTGGACTGCGGCGCTCGAATCGGACCCGGTGGTCAAGCTGCTGGAGTTGG CGGCGTACGACGAGGTTCGATATCGAGCGCGTATCAATGATTGCGGGCGGGCTGTTCTGCTCGCCTGCGCGACCGGGGCT GATCTCGAACATCTCGCCGCGCTTTGGAACATCAAGAAAGAGATCGTCGATCCCGGCGATCCCGATGCGCATCCGCCGGT TCCCGTGACCTACGAGAAAGACGATCGCCTGCGCCTTCGCACGCAGATGGCGATCGAGCAGGCGACGACGGCCGGGCCGG CGGGTTCGTATCGGTCGATTGCGCTCAACGCATCGGCCGACGTTGCGGACGTGCGGGTCGATCGCGGTGTGCCGGGCGTC GTCCGCGTGGTCGTGAAGTCGCAATCGAACGGTGGGGTGCCAAGTGCCGCGCTGCTCGATGTGGTTCAACATGCCCTGAC GCCCGAGGATCGGCGCCCGCTGAACGACACGGTGCAAGTGCTGCCCGCTCGGCCGGTCGACTACTCGATCGTGGCGGACA TCTACGTCGGTCGCGGCCCTGATCCTGACGTCGTGATCGCCGCACGTCGCTTCGATCTCGATATTGCGGTCAACGATGGC GCCCGACTGCGCAATGGCATGCCGCGCTCGGCGATCACCGGGGCGCTGCATCCGAAGTCGTCGGGTGTCGTTCGGGTCGA GCTGACGGCCCCGGCTGCCGACGTCGAATGCGAGTTCGACCAGTTCGCGCGGTGCGCGTCGATCACGCTGAATGCGAAGG TGAAGGATGACGACTGA
Upstream 100 bases:
>100_bases AGCTGGATCGGGTCGCGGTGCAGTCGGTTGTCGACGGCAAAGTAACTTTCCTCATTGCCGGTCGTTATGACGATGGCGAT GTCGTGTTCGAGGTGACGGT
Downstream 100 bases:
>100_bases ACCGCTCTTGCCGGCGAATCAAACCTCGCTTGAGGCGGCGCTCGCTCAGATGATGCGGCCGAGCGTCGAGCCCGACATCA TCCGCACGCTGTGGGACGCG
Product: Baseplate J family protein
Products: NA
Alternate protein names: Baseplate Assembly Protein J; Baseplate J-Like Protein; Phage Baseplate Assembly Protein; Phage-Related Baseplate Assembly Protein; Phage Baseplate Assembly Protein J; Pyocin R2_PP Baseplate/Tail Fiber Protein; Bacteriophage Baseplate Assembly Protein J; Phage Baseplate J-Like Protein; Prophage LambdaW5 Baseplate Assembly Protein J; Baseplate Assembly-Like Protein; GPJ Of Phage P2-Like; Phage P2 Baseplate Assembly Protein; Phage Tail-Like Protein; Bacteriophage Protein; Phage P2 Baseplate Assembly GpJ-Like Protein; Prophage Baseplate Assembly Protein; Bacteriophage P2 Baseplate Assembly Protein GPJ; Phage Protein Gp; Baseplate Assembly Protein J Prophage; Baseplate Assembly Protein; Baseplate Protein Putative Phage Associated Protein; Prophage LambdaW1 Baseplate Assembly Protein J; Phage Tail Protein; Bacteriophage Baseplate Assembly Protein
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MTMIDLSAMDPPDLVETLDFEAAYQLKLAHFKGIYPDWTAALESDPVVKLLELAAYDEVRYRARINDCGRAVLLACATGA DLEHLAALWNIKKEIVDPGDPDAHPPVPVTYEKDDRLRLRTQMAIEQATTAGPAGSYRSIALNASADVADVRVDRGVPGV VRVVVKSQSNGGVPSAALLDVVQHALTPEDRRPLNDTVQVLPARPVDYSIVADIYVGRGPDPDVVIAARRFDLDIAVNDG ARLRNGMPRSAITGALHPKSSGVVRVELTAPAADVECEFDQFARCASITLNAKVKDDD
Sequences:
>Translated_298_residues MTMIDLSAMDPPDLVETLDFEAAYQLKLAHFKGIYPDWTAALESDPVVKLLELAAYDEVRYRARINDCGRAVLLACATGA DLEHLAALWNIKKEIVDPGDPDAHPPVPVTYEKDDRLRLRTQMAIEQATTAGPAGSYRSIALNASADVADVRVDRGVPGV VRVVVKSQSNGGVPSAALLDVVQHALTPEDRRPLNDTVQVLPARPVDYSIVADIYVGRGPDPDVVIAARRFDLDIAVNDG ARLRNGMPRSAITGALHPKSSGVVRVELTAPAADVECEFDQFARCASITLNAKVKDDD >Mature_297_residues TMIDLSAMDPPDLVETLDFEAAYQLKLAHFKGIYPDWTAALESDPVVKLLELAAYDEVRYRARINDCGRAVLLACATGAD LEHLAALWNIKKEIVDPGDPDAHPPVPVTYEKDDRLRLRTQMAIEQATTAGPAGSYRSIALNASADVADVRVDRGVPGVV RVVVKSQSNGGVPSAALLDVVQHALTPEDRRPLNDTVQVLPARPVDYSIVADIYVGRGPDPDVVIAARRFDLDIAVNDGA RLRNGMPRSAITGALHPKSSGVVRVELTAPAADVECEFDQFARCASITLNAKVKDDD
Specific function: Unknown
COG id: COG3948
COG function: function code R; Phage-related baseplate assembly protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32186; Mature: 32055
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMIDLSAMDPPDLVETLDFEAAYQLKLAHFKGIYPDWTAALESDPVVKLLELAAYDEVR CEEEECCCCCCHHHHHHCCCCHHEEEEEHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHH YRARINDCGRAVLLACATGADLEHLAALWNIKKEIVDPGDPDAHPPVPVTYEKDDRLRLR HHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHH TQMAIEQATTAGPAGSYRSIALNASADVADVRVDRGVPGVVRVVVKSQSNGGVPSAALLD HHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCCCCHHHHHH VVQHALTPEDRRPLNDTVQVLPARPVDYSIVADIYVGRGPDPDVVIAARRFDLDIAVNDG HHHHHCCCCCCCCCCCHHEEECCCCCCEEEEEEEEECCCCCCCEEEEEEEEEEEEEECCC ARLRNGMPRSAITGALHPKSSGVVRVELTAPAADVECEFDQFARCASITLNAKVKDDD HHHHCCCCHHHHCCCCCCCCCCEEEEEEECCCCCCEECHHHHHHEHEEEEEEEECCCC >Mature Secondary Structure TMIDLSAMDPPDLVETLDFEAAYQLKLAHFKGIYPDWTAALESDPVVKLLELAAYDEVR EEEECCCCCCHHHHHHCCCCHHEEEEEHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHH YRARINDCGRAVLLACATGADLEHLAALWNIKKEIVDPGDPDAHPPVPVTYEKDDRLRLR HHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHH TQMAIEQATTAGPAGSYRSIALNASADVADVRVDRGVPGVVRVVVKSQSNGGVPSAALLD HHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCCCCHHHHHH VVQHALTPEDRRPLNDTVQVLPARPVDYSIVADIYVGRGPDPDVVIAARRFDLDIAVNDG HHHHHCCCCCCCCCCCHHEEECCCCCCEEEEEEEEECCCCCCCEEEEEEEEEEEEEECCC ARLRNGMPRSAITGALHPKSSGVVRVELTAPAADVECEFDQFARCASITLNAKVKDDD HHHHCCCCHHHHCCCCCCCCCCEEEEEEECCCCCCEECHHHHHHEHEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA