| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028264
Identifier: 238028264
GI number: 238028264
Start: 3094042
End: 3094620
Strand: Reverse
Name: 238028264
Synonym: bglu_1g27180
Alternate gene names: NA
Gene position: 3094620-3094042 (Counterclockwise)
Preceding gene: 238028265
Following gene: 238028263
Centisome position: 79.22
GC content: 65.98
Gene sequence:
>579_bases ATGACGACTGAACCGCTCTTGCCGGCGAATCAAACCTCGCTTGAGGCGGCGCTCGCTCAGATGATGCGGCCGAGCGTCGA GCCCGACATCATCCGCACGCTGTGGGACGCGGACCGCTGCCCGGCTGCGTTCCTTCCGTGGTTGGCGTGGTCGCTTCAGG TGGACGGGTGGGAACTGGCCGAGTCCGACGAGGCACGCCGCGAGCTGATCAAGTCGTCGCTGGCGATCTATCGGCGCAAG GGCACGCCGTGGGCGATTCGGGAGATCGTACGGCGGCTCGGGTTCGGCGAGGTGGATATTCAAGAGGGGCGTGGCCTTGC TCGCCGCGACGGCTCGGCACGCCGCGATGGGCGCTATCTGCATGGCGGCGACGGTGCCTGGGCCGAATACATCGTCACCC TGCGTCGTGCCGTGACGCGCGACCAGGGCGAGAAGATCAAACGGGCGATCGAACGCTACGCGCCGGCCCGCAGCAGGCTG GCATGGCTGGATTTCTCCGAGGTTGCGATCCGGCACAACGGCGTCGCGACACGCAACGGGCAATTTACACGAGGGATTAT CGGAACATGGCCAATCTGA
Upstream 100 bases:
>100_bases GTCGTTCGGGTCGAGCTGACGGCCCCGGCTGCCGACGTCGAATGCGAGTTCGACCAGTTCGCGCGGTGCGCGTCGATCAC GCTGAATGCGAAGGTGAAGG
Downstream 100 bases:
>100_bases AAGAGGACAGTGCCTGGGTAGACGGTATCTACCAGTTGGAAACGTCGGATCCCGTGCAGGGTGGCCCCGATGGTGTCGAC AATGTGCAGGCAAAGCAACT
Product: phage tail protein I
Products: NA
Alternate protein names: Tail Protein I; Bacteriophage Tail Fiber Protein; Phage-Related Tail Protein; Phage Tail Protein; Bacteriophage P2-Related Tail Formation Protein; Tail Protein I Prophage; Phage P2 Baseplate Assembly GpI-Like Protein; Polyprotein; Bacteriophage Protein; Bacteriophage Tail Protein I; Bacteriophage Tail Protein; Phage Tail Protein GpI; Bacteriophage P2-Related Tail Formation Protein GpI; Bacteriophage Tail Formation Protein I; Pyocin R2_PP Tail Formation Protein
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MTTEPLLPANQTSLEAALAQMMRPSVEPDIIRTLWDADRCPAAFLPWLAWSLQVDGWELAESDEARRELIKSSLAIYRRK GTPWAIREIVRRLGFGEVDIQEGRGLARRDGSARRDGRYLHGGDGAWAEYIVTLRRAVTRDQGEKIKRAIERYAPARSRL AWLDFSEVAIRHNGVATRNGQFTRGIIGTWPI
Sequences:
>Translated_192_residues MTTEPLLPANQTSLEAALAQMMRPSVEPDIIRTLWDADRCPAAFLPWLAWSLQVDGWELAESDEARRELIKSSLAIYRRK GTPWAIREIVRRLGFGEVDIQEGRGLARRDGSARRDGRYLHGGDGAWAEYIVTLRRAVTRDQGEKIKRAIERYAPARSRL AWLDFSEVAIRHNGVATRNGQFTRGIIGTWPI >Mature_191_residues TTEPLLPANQTSLEAALAQMMRPSVEPDIIRTLWDADRCPAAFLPWLAWSLQVDGWELAESDEARRELIKSSLAIYRRKG TPWAIREIVRRLGFGEVDIQEGRGLARRDGSARRDGRYLHGGDGAWAEYIVTLRRAVTRDQGEKIKRAIERYAPARSRLA WLDFSEVAIRHNGVATRNGQFTRGIIGTWPI
Specific function: Unknown
COG id: COG4385
COG function: function code R; Bacteriophage P2-related tail formation protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21796; Mature: 21665
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTEPLLPANQTSLEAALAQMMRPSVEPDIIRTLWDADRCPAAFLPWLAWSLQVDGWELA CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCC ESDEARRELIKSSLAIYRRKGTPWAIREIVRRLGFGEVDIQEGRGLARRDGSARRDGRYL CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEHHCCCCCHHCCCCCCCCCCEE HGGDGAWAEYIVTLRRAVTRDQGEKIKRAIERYAPARSRLAWLDFSEVAIRHNGVATRNG ECCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHEECCCHHHHHHHCCCCCCCCC QFTRGIIGTWPI CCCCCCCCCCCC >Mature Secondary Structure TTEPLLPANQTSLEAALAQMMRPSVEPDIIRTLWDADRCPAAFLPWLAWSLQVDGWELA CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCC ESDEARRELIKSSLAIYRRKGTPWAIREIVRRLGFGEVDIQEGRGLARRDGSARRDGRYL CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEHHCCCCCHHCCCCCCCCCCEE HGGDGAWAEYIVTLRRAVTRDQGEKIKRAIERYAPARSRLAWLDFSEVAIRHNGVATRNG ECCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHEECCCHHHHHHHCCCCCCCCC QFTRGIIGTWPI CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA